Cow genome map
| Conread name: | Ss1.1-rpliv0127_b7.5 |
| Conread position: | 1-285 |
| Cow position: | chr24:17077833-17077550 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 47, 39 |
| Conread position: | 6-278 |
| Cow position: | chr24:17013177-17013448 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 43, 34 |
| Conread position: | 7-252 |
| Cow position: | chr24:17070809-17071053 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 38, 27 |
| Conread position: | 7-253 |
| Cow position: | chr24:17035272-17035027 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 33 |
| Conread position: | 7-256 |
| Cow position: | chr24:17036028-17035780 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 42, 36 |
| Conread position: | 7-283 |
| Cow position: | chr24:17035524-17035250 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 28 |
| Conread position: | 7-283 |
| Cow position: | chr24:17035860-17035585 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 40, 28 |
| Conread position: | 7-285 |
| Cow position: | chr24:17035356-17035079 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 42, 36 |
| Conread position: | 7-285 |
| Cow position: | chr24:17036112-17035835 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 40, 33 |
| Conread position: | 7-285 |
| Cow position: | chr24:17036364-17036087 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 40, 33 |
| Conread position: | 7-285 |
| Cow position: | chr24:17070389-17070666 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 43, 36 |
| Conread position: | 7-285 |
| Cow position: | chr24:17077995-17077718 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 126, 115 |
| Conread position: | 7-292 |
| Cow position: | chr24:17035608-17035324 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 42, 28 |
| Conread position: | 7-292 |
| Cow position: | chr24:17036280-17035996 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 44, 33 |
| Conread position: | 8-271 |
| Cow position: | chr24:17035775-17035513 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 41, 27 |
| Conread position: | 8-285 |
| Cow position: | chr24:17077910-17077634 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 40, 30 |
| Conread position: | 12-285 |
| Cow position: | chr24:17036608-17036339 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 37, 23 |
| Conread position: | 13-277 |
| Cow position: | chr24:17070731-17070994 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 13-285 |
| Cow position: | chr24:17070647-17070918 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 35, 24 |
| Conread position: | 14-285 |
| Cow position: | chr24:17070480-17070750 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 113, 120 |
| Conread position: | 17-283 |
| Cow position: | chr24:17078153-17077888 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 23-265 |
| Cow position: | chr24:17036432-17036191 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 26, 12 |
| Conread position: | 48-279 |
| Cow position: | chr24:17036155-17035925 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 84, 70 |
| Conread position: | 56-283 |
| Cow position: | chr24:17036483-17036257 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 63, 0 |
Show alignments to all cow chromosomes.