Cow genome map


           Conread name:
           Ss1.1-rpliv0127_b7.5
        

               Conread position:
               1-278
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               1-284
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               33, 44
               

               Conread position:
               1-285
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               1-285
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 32
               

               Conread position:
               1-285
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               46, 36
               

               Conread position:
               1-285
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               131, 122
               

               Conread position:
               1-293
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               2-285
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               21, 42
               

               Conread position:
               4-278
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               47, 39
               

               Conread position:
               4-284
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               45, 39
               

               Conread position:
               4-287
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               115, 134
               

               Conread position:
               5-288
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               44, 35
               

               Conread position:
               7-277
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               36, 40
               

               Conread position:
               7-277
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               112, 130
               

               Conread position:
               7-278
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               36, 41
               

               Conread position:
               7-283
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               130, 116
               

               Conread position:
               7-283
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               34, 40
               

               Conread position:
               7-283
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               40, 28
               

               Conread position:
               7-284
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               36, 41
               

               Conread position:
               7-284
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               26, 32
               

               Conread position:
               7-285
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               7-285
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               125, 112
               

               Conread position:
               7-285
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               40, 36
               

               Conread position:
               7-288
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               120, 111
               

               Conread position:
               7-290
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               7-292
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               26, 119
               

               Conread position:
               7-292
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               44, 26
               

               Conread position:
               7-293
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               120, 44
               

               Conread position:
               8-277
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               8-278
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               49, 44
               

               Conread position:
               8-283
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               45, 49
               

               Conread position:
               8-283
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               194, 115
               

               Conread position:
               8-283
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               41, 26
               

               Conread position:
               8-284
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               8-284
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               109, 127
               

               Conread position:
               8-285
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               35, 40
               

               Conread position:
               8-285
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               32, 27
               

               Conread position:
               8-285
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               39, 35
               

               Conread position:
               8-286
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               37, 27
               

               Conread position:
               8-293
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               49, 35
               

               Conread position:
               8-293
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               10-283
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               42, 46
               

               Conread position:
               12-285
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               14-287
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               38, 43
               

               Conread position:
               14-288
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               188, 105
               

               Conread position:
               15-277
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               28, 32
               

               Conread position:
               15-285
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               32, 20
               

               Conread position:
               17-283
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               120, 102
               

               Conread position:
               20-255
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               32, 18
               

               Conread position:
               47-284
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               83, 69
               

               Conread position:
               50-285
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               172, 85
               

               Conread position:
               55-287
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               56-285
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               59-284
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               21, 5
               

               Conread position:
               79-284
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               94-284
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               43, 29
               
Show alignments to all cow chromosomes.