Cow genome map
| Conread name: | Ss1.1-rpliv0127_b7.5 |
| Conread position: | 1-279 |
| Cow position: | chr3:68027100-68027377 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 48, 37 |
| Conread position: | 1-281 |
| Cow position: | chr3:77350904-77350628 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 1-283 |
| Cow position: | chr3:68045693-68045974 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 48, 34 |
| Conread position: | 1-288 |
| Cow position: | chr3:62722233-62721947 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 36 |
| Conread position: | 6-283 |
| Cow position: | chr3:68045866-68046142 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 117, 128 |
| Conread position: | 7-251 |
| Cow position: | chr3:62721807-62721564 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 16 |
| Conread position: | 7-278 |
| Cow position: | chr3:62742709-62742978 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 34, 28 |
| Conread position: | 7-278 |
| Cow position: | chr3:62743190-62743460 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 7-283 |
| Cow position: | chr3:68027358-68027633 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 22, 41 |
| Conread position: | 7-285 |
| Cow position: | chr3:62721891-62721614 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 40, 28 |
| Conread position: | 7-285 |
| Cow position: | chr3:62722059-62721782 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 38, 30 |
| Conread position: | 7-285 |
| Cow position: | chr3:62742628-62742901 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 44, 13 |
| Conread position: | 7-285 |
| Cow position: | chr3:77351142-77350873 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 170, 36 |
| Conread position: | 8-278 |
| Cow position: | chr3:68027191-68027460 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 26, 39 |
| Conread position: | 11-262 |
| Cow position: | chr3:77350810-77350565 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 19, 12 |
| Conread position: | 11-279 |
| Cow position: | chr3:62743110-62743377 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 114, 123 |
| Conread position: | 13-285 |
| Cow position: | chr3:62743033-62743299 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 28, 22 |
| Conread position: | 43-279 |
| Cow position: | chr3:62722360-62722124 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 9, 22 |
| Conread position: | 53-285 |
| Cow position: | chr3:68045663-68045892 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 77, 9 |
Show alignments to all cow chromosomes.