Cow genome map
| Conread name: | Ss1.1-rpliv0127_b7.5 |
| Conread position: | 1-285 |
| Cow position: | chr6:49340664-49340947 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 210, 122 |
| Conread position: | 2-285 |
| Cow position: | chr6:49340413-49340695 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 45, 33 |
| Conread position: | 2-285 |
| Cow position: | chr6:49340917-49341199 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 4-285 |
| Cow position: | chr6:49340751-49341031 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 7-180 |
| Cow position: | chr6:49341258-49341430 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 7-283 |
| Cow position: | chr6:49340586-49340860 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 107, 100 |
| Conread position: | 7-285 |
| Cow position: | chr6:49340838-49341115 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 7-285 |
| Cow position: | chr6:49341090-49341367 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 120, 130 |
| Conread position: | 8-262 |
| Cow position: | chr6:49341175-49341428 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 38, 32 |
| Conread position: | 10-296 |
| Cow position: | chr6:49396226-49396510 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 123, 109 |
| Conread position: | 63-283 |
| Cow position: | chr6:49340390-49340609 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 56, 0 |
Show alignments to all cow chromosomes.