Cow genome map
| Conread name: | Ss1.1-rpliv0127_b7.5 |
| Conread position: | 1-268 |
| Cow position: | chr8:48407033-48406768 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 48, 7 |
| Conread position: | 1-279 |
| Cow position: | chr8:45201194-45201471 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 117, 131 |
| Conread position: | 1-293 |
| Cow position: | chr8:48407538-48407247 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 48, 34 |
| Conread position: | 2-279 |
| Cow position: | chr8:45201279-45201555 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 55, 41 |
| Conread position: | 2-285 |
| Cow position: | chr8:45201027-45201309 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 2-287 |
| Cow position: | chr8:46816054-46816338 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 46, 35 |
| Conread position: | 2-293 |
| Cow position: | chr8:46816306-46816596 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 130, 117 |
| Conread position: | 5-302 |
| Cow position: | chr8:46816645-46816939 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 44 |
| Conread position: | 7-243 |
| Cow position: | chr8:46817151-46817386 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 36, 41 |
| Conread position: | 7-276 |
| Cow position: | chr8:55581088-55581356 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 33, 28 |
| Conread position: | 7-278 |
| Cow position: | chr8:45201704-45201974 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 50, 36 |
| Conread position: | 7-283 |
| Cow position: | chr8:46815888-46816166 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 77, 115 |
| Conread position: | 7-283 |
| Cow position: | chr8:46816731-46817006 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 199 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 36, 49 |
| Conread position: | 7-283 |
| Cow position: | chr8:46816899-46817173 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 47, 28 |
| Conread position: | 7-283 |
| Cow position: | chr8:48406692-48406417 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 34, 40 |
| Conread position: | 7-285 |
| Cow position: | chr8:45201536-45201813 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 7-285 |
| Cow position: | chr8:45201620-45201897 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 7-285 |
| Cow position: | chr8:48407280-48407003 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 41 |
| Conread position: | 7-285 |
| Cow position: | chr8:48407616-48407339 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 7-288 |
| Cow position: | chr8:55580836-55581116 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 124, 112 |
| Conread position: | 7-293 |
| Cow position: | chr8:45201116-45201401 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 196, 124 |
| Conread position: | 7-293 |
| Cow position: | chr8:46816227-46816512 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 36, 50 |
| Conread position: | 7-293 |
| Cow position: | chr8:46816479-46816764 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 200 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 7-306 |
| Cow position: | chr8:45201452-45201749 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 22, 41 |
| Conread position: | 8-275 |
| Cow position: | chr8:55581341-55581607 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 8-283 |
| Cow position: | chr8:48407363-48407089 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 202, 111 |
| Conread position: | 8-283 |
| Cow position: | chr8:48407447-48407173 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 116, 126 |
| Conread position: | 8-285 |
| Cow position: | chr8:45200949-45201225 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 38, 27 |
| Conread position: | 8-293 |
| Cow position: | chr8:46817068-46817353 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 48 |
| Conread position: | 10-277 |
| Cow position: | chr8:46815978-46816244 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 12-285 |
| Cow position: | chr8:55581009-55581281 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 119, 107 |
| Conread position: | 15-285 |
| Cow position: | chr8:48407188-48406919 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 33, 20 |
Show alignments to all cow chromosomes.