Cow genome map
| Conread name: | Ss1.1-rpliv0129_b1.5.5 |
| Conread position: | 1-682 |
| Cow position: | chr12:29715981-29715287 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 450 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 65, 76 |
| Conread position: | 2-195 |
| Cow position: | chr12:13116451-13116255 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 19, 105 |
| Conread position: | 2-366 |
| Cow position: | chr12:25321133-25321491 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 48 |
| Conread position: | 2-388 |
| Cow position: | chr12:4784475-4784095 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 200 |
| Conread position: | 2-405 |
| Cow position: | chr12:28835115-28834700 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 272 |
| Conread position: | 2-435 |
| Cow position: | chr12:757666-758100 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 294 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 6, 74 |
| Conread position: | 2-446 |
| Cow position: | chr12:30677846-30678285 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 52 |
| Conread position: | 2-476 |
| Cow position: | chr12:36573831-36573365 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 317 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 112, 14 |
| Conread position: | 2-479 |
| Cow position: | chr12:8890829-8890350 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 45 |
| Conread position: | 3-374 |
| Cow position: | chr12:32121797-32121425 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 32, 94 |
| Conread position: | 3-428 |
| Cow position: | chr12:4933410-4933818 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 292 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 183, 56 |
| Conread position: | 3-447 |
| Cow position: | chr12:21252370-21251917 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 70 |
| Conread position: | 3-479 |
| Cow position: | chr12:10542816-10542344 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 324 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 118, 54 |
| Conread position: | 3-760 |
| Cow position: | chr12:1887133-1886393 (view UCSC Genome Browser custom track) |
| Alignm length: | 775 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 94 |
| Conread position: | 4-381 |
| Cow position: | chr12:3179584-3179967 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 144 |
| Conread position: | 12-179 |
| Cow position: | chr12:14660123-14659960 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 21, 6 |
| Conread position: | 12-221 |
| Cow position: | chr12:8844279-8844067 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 6 |
| Conread position: | 12-348 |
| Cow position: | chr12:36085856-36085525 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 26, 12 |
| Conread position: | 12-410 |
| Cow position: | chr12:41594256-41594673 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 277 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 110, 6 |
| Conread position: | 12-436 |
| Cow position: | chr12:35633283-35632865 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 6 |
| Conread position: | 12-444 |
| Cow position: | chr12:8143392-8142983 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 291 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 177, 94 |
| Conread position: | 12-447 |
| Cow position: | chr12:2284230-2284665 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 286 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 15, 6 |
| Conread position: | 12-477 |
| Cow position: | chr12:12294749-12295230 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 330 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 21, 86 |
| Conread position: | 12-686 |
| Cow position: | chr12:21129261-21129945 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 6 |
| Conread position: | 13-399 |
| Cow position: | chr12:25261292-25260897 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 141 |
| Conread position: | 13-444 |
| Cow position: | chr12:1404490-1404931 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 59 |
| Conread position: | 13-447 |
| Cow position: | chr12:42857305-42856865 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 139 |
| Conread position: | 13-740 |
| Cow position: | chr12:41464540-41463852 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 104 |
| Conread position: | 13-757 |
| Cow position: | chr12:8675854-8675108 (view UCSC Genome Browser custom track) |
| Alignm length: | 769 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 135 |
| Conread position: | 14-444 |
| Cow position: | chr12:3210195-3210649 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 14-444 |
| Cow position: | chr12:27853737-27853287 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 387 |
| Conread position: | 17-342 |
| Cow position: | chr12:20460997-20460665 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 130 |
| Conread position: | 17-746 |
| Cow position: | chr12:23160663-23159954 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 191 |
| Conread position: | 24-479 |
| Cow position: | chr12:8555089-8555558 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 308 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 9, 72 |
| Conread position: | 25-740 |
| Cow position: | chr12:27514897-27515594 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 50 |
| Conread position: | 26-221 |
| Cow position: | chr12:15775639-15775837 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 26-229 |
| Cow position: | chr12:31332090-31331887 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 95, 119 |
| Conread position: | 26-268 |
| Cow position: | chr12:14213936-14213685 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 26-276 |
| Cow position: | chr12:27930519-27930263 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 100, 125 |
| Conread position: | 26-292 |
| Cow position: | chr12:24030710-24030437 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 96, 230 |
| Conread position: | 26-382 |
| Cow position: | chr12:21200980-21201344 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 245 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 26-399 |
| Cow position: | chr12:24979921-24980299 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 12 |
| Conread position: | 26-415 |
| Cow position: | chr12:24432654-24432261 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 264 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 58, 170 |
| Conread position: | 26-425 |
| Cow position: | chr12:33121633-33122021 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 89, 28 |
| Conread position: | 26-444 |
| Cow position: | chr12:33926288-33925860 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 26-447 |
| Cow position: | chr12:251604-251177 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 26-447 |
| Cow position: | chr12:3718039-3717608 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 26-447 |
| Cow position: | chr12:8137718-8137307 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 13 |
| Conread position: | 26-447 |
| Cow position: | chr12:25097997-25097602 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 363, 69 |
| Conread position: | 26-456 |
| Cow position: | chr12:22592980-22593428 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 296 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 98, 196 |
| Conread position: | 26-458 |
| Cow position: | chr12:21210906-21211347 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 432 |
| Conread position: | 26-479 |
| Cow position: | chr12:18467026-18467487 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 385 |
| Conread position: | 26-680 |
| Cow position: | chr12:24993736-24993093 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 441 |
| Conread position: | 26-725 |
| Cow position: | chr12:1775689-1774995 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 71 |
| Conread position: | 26-746 |
| Cow position: | chr12:11100482-11101193 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 126 |
| Conread position: | 26-759 |
| Cow position: | chr12:21430194-21430921 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 432 |
| Conread position: | 26-760 |
| Cow position: | chr12:1407067-1407790 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 368 |
| Conread position: | 26-760 |
| Cow position: | chr12:3363177-3363902 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 73 |
| Conread position: | 26-760 |
| Cow position: | chr12:12755924-12755196 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 432 |
| Conread position: | 26-760 |
| Cow position: | chr12:23139083-23138370 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 12 |
| Conread position: | 26-760 |
| Cow position: | chr12:25267102-25266374 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 420 |
| Conread position: | 26-760 |
| Cow position: | chr12:28764795-28764040 (view UCSC Genome Browser custom track) |
| Alignm length: | 761 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 86 |
| Conread position: | 26-760 |
| Cow position: | chr12:30685979-30686699 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 154 |
| Conread position: | 26-760 |
| Cow position: | chr12:32655790-32656513 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 141 |
| Conread position: | 26-760 |
| Cow position: | chr12:34175589-34176323 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 73 |
| Conread position: | 26-760 |
| Cow position: | chr12:36212487-36213215 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 406 |
| Conread position: | 26-760 |
| Cow position: | chr12:37561243-37561967 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 126 |
| Conread position: | 26-760 |
| Cow position: | chr12:42605941-42605217 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 98 |
| Conread position: | 27-185 |
| Cow position: | chr12:20845146-20845306 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 27-329 |
| Cow position: | chr12:35300664-35300356 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 221 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 103, 61 |
| Conread position: | 27-375 |
| Cow position: | chr12:2768861-2769215 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 236 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 89, 149 |
| Conread position: | 27-725 |
| Cow position: | chr12:22571084-22571765 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 125 |
| Conread position: | 32-308 |
| Cow position: | chr12:6442985-6442702 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 94, 63 |
| Conread position: | 32-381 |
| Cow position: | chr12:17968044-17968383 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 198, 63 |
| Conread position: | 32-480 |
| Cow position: | chr12:20882361-20882794 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 22 |
| Conread position: | 33-436 |
| Cow position: | chr12:43898372-43897974 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 93, 302 |
| Conread position: | 39-340 |
| Cow position: | chr12:19728176-19727878 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 222 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 153, 10 |
| Conread position: | 39-760 |
| Cow position: | chr12:22747463-22748173 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 104 |
| Conread position: | 40-296 |
| Cow position: | chr12:19872534-19872794 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 149, 111 |
| Conread position: | 43-479 |
| Cow position: | chr12:27880739-27880294 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 290 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 145, 48 |
| Conread position: | 46-353 |
| Cow position: | chr12:29445984-29446289 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 21, 26 |
| Conread position: | 47-760 |
| Cow position: | chr12:35548876-35548168 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 413 |
| Conread position: | 63-760 |
| Cow position: | chr12:18584946-18585631 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 378 |
| Conread position: | 66-294 |
| Cow position: | chr12:6480109-6479875 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 123, 56 |
| Conread position: | 67-193 |
| Cow position: | chr12:16818449-16818577 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 71-359 |
| Cow position: | chr12:22565346-22565641 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 50, 182 |
| Conread position: | 71-444 |
| Cow position: | chr12:17717577-17717960 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 71-475 |
| Cow position: | chr12:30140715-30141116 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 45, 68 |
| Conread position: | 74-772 |
| Cow position: | chr12:38892641-38893334 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 384 |
| Conread position: | 80-378 |
| Cow position: | chr12:22518771-22518465 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 98-347 |
| Cow position: | chr12:14854890-14854625 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 23, 53 |
| Conread position: | 98-350 |
| Cow position: | chr12:364872-364621 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 92, 21 |
| Conread position: | 98-447 |
| Cow position: | chr12:21944426-21944781 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 19, 53 |
| Conread position: | 109-276 |
| Cow position: | chr12:21428231-21428402 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 80, 41 |
| Conread position: | 109-435 |
| Cow position: | chr12:22338543-22338861 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 83, 46 |
| Conread position: | 111-479 |
| Cow position: | chr12:6078781-6078414 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 81, 31 |
| Conread position: | 115-360 |
| Cow position: | chr12:35262877-35263116 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 85, 19 |
| Conread position: | 115-444 |
| Cow position: | chr12:1056775-1057113 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 82, 24 |
| Conread position: | 115-447 |
| Cow position: | chr12:21483728-21484062 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 28, 152 |
| Conread position: | 147-479 |
| Cow position: | chr12:12929529-12929190 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 238 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 45, 317 |
| Conread position: | 154-435 |
| Cow position: | chr12:18201699-18201977 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 46, 10 |
| Conread position: | 154-478 |
| Cow position: | chr12:8343659-8343328 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 57, 42 |
| Conread position: | 156-479 |
| Cow position: | chr12:12241462-12241766 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 232, 25 |
| Conread position: | 160-765 |
| Cow position: | chr12:34964931-34964335 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 294 |
| Conread position: | 178-480 |
| Cow position: | chr12:39414606-39414898 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 197-480 |
| Cow position: | chr12:15080026-15080301 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 159, 25 |
| Conread position: | 205-462 |
| Cow position: | chr12:20846554-20846816 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 218-444 |
| Cow position: | chr12:730516-730741 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 184, 129 |
| Conread position: | 220-724 |
| Cow position: | chr12:29499749-29499277 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 333 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 168, 17 |
| Conread position: | 225-444 |
| Cow position: | chr12:27355273-27355053 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 56, 187 |
| Conread position: | 225-760 |
| Cow position: | chr12:42231753-42232268 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 351 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 164, 38 |
| Conread position: | 227-444 |
| Cow position: | chr12:20995316-20995098 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 86, 73 |
| Conread position: | 228-447 |
| Cow position: | chr12:6106906-6106686 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 230-444 |
| Cow position: | chr12:536820-537035 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 231-397 |
| Cow position: | chr12:35346768-35346932 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 157, 69 |
| Conread position: | 248-760 |
| Cow position: | chr12:10358160-10358654 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 340 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 114, 105 |
| Conread position: | 250-760 |
| Cow position: | chr12:36406204-36405709 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 340 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 139, 208 |
| Conread position: | 252-472 |
| Cow position: | chr12:47822631-47822843 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 54, 33 |
| Conread position: | 309-736 |
| Cow position: | chr12:4664034-4663629 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 293 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 79, 140 |
| Conread position: | 327-783 |
| Cow position: | chr12:62667-62225 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 304 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 62, 131 |
| Conread position: | 495-1167 |
| Cow position: | chr12:42192923-42193615 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 425 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 53, 96 |
| Conread position: | 531-738 |
| Cow position: | chr12:27354992-27354782 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 21, 155 |
| Conread position: | 537-760 |
| Cow position: | chr12:27958797-27958567 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 16, 134 |
| Conread position: | 537-760 |
| Cow position: | chr12:31028088-31027862 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 134 |
| Conread position: | 537-760 |
| Cow position: | chr12:46163468-46163698 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 16, 134 |
| Conread position: | 551-759 |
| Cow position: | chr12:24993079-24992865 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 17, 119 |
| Conread position: | 551-760 |
| Cow position: | chr12:24980465-24980680 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 17, 119 |
| Conread position: | 551-783 |
| Cow position: | chr12:536825-536586 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 17, 216 |
| Conread position: | 757-1224 |
| Cow position: | chr12:19187871-19188344 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 323 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 115, 70 |
| Conread position: | 852-1159 |
| Cow position: | chr12:21904443-21904752 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 33, 7 |
| Conread position: | 884-1169 |
| Cow position: | chr12:4717372-4717657 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 59, 122 |
| Conread position: | 885-1218 |
| Cow position: | chr12:42557955-42557609 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 79, 213 |
| Conread position: | 888-1224 |
| Cow position: | chr12:19971875-19972209 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 100, 110 |
| Conread position: | 957-1224 |
| Cow position: | chr12:27048375-27048637 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 71, 25 |
| Conread position: | 961-1221 |
| Cow position: | chr12:10403194-10402926 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 143 |
Show alignments to all cow chromosomes.