Cow genome map

Conread name: Ss1.1-rpliv0129_b1.5.5

Conread position: 1-169
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 2-286
Cow position:
Alignm length: 289
Alignm identity: 208
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 29, 121

Conread position: 2-293
Cow position:
Alignm length: 305
Alignm identity: 205
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 76

Conread position: 2-296
Cow position:
Alignm length: 305
Alignm identity: 213
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 32, 146

Conread position: 2-338
Cow position:
Alignm length: 341
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 127

Conread position: 2-385
Cow position:
Alignm length: 394
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 322

Conread position: 2-427
Cow position:
Alignm length: 448
Alignm identity: 292
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 25, 200

Conread position: 2-446
Cow position:
Alignm length: 448
Alignm identity: 293
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 258, 17

Conread position: 2-446
Cow position:
Alignm length: 457
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 149

Conread position: 2-479
Cow position:
Alignm length: 501
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 50

Conread position: 2-746
Cow position:
Alignm length: 780
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 26

Conread position: 3-207
Cow position:
Alignm length: 209
Alignm identity: 142
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 3-208
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 24, 150

Conread position: 3-269
Cow position:
Alignm length: 277
Alignm identity: 185
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 69

Conread position: 3-434
Cow position:
Alignm length: 443
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 54

Conread position: 3-458
Cow position:
Alignm length: 467
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 165

Conread position: 3-756
Cow position:
Alignm length: 778
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 461

Conread position: 3-760
Cow position:
Alignm length: 781
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 392

Conread position: 4-364
Cow position:
Alignm length: 372
Alignm identity: 254
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 181, 73

Conread position: 4-397
Cow position:
Alignm length: 402
Alignm identity: 264
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 109, 266

Conread position: 4-430
Cow position:
Alignm length: 459
Alignm identity: 301
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 150

Conread position: 6-444
Cow position:
Alignm length: 450
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 147

Conread position: 9-276
Cow position:
Alignm length: 277
Alignm identity: 193
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 11-418
Cow position:
Alignm length: 418
Alignm identity: 278
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 16, 61

Conread position: 12-187
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 112, 21

Conread position: 12-272
Cow position:
Alignm length: 274
Alignm identity: 187
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 9, 153

Conread position: 12-298
Cow position:
Alignm length: 299
Alignm identity: 206
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 6

Conread position: 12-298
Cow position:
Alignm length: 299
Alignm identity: 213
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 109, 0

Conread position: 12-336
Cow position:
Alignm length: 330
Alignm identity: 213
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 109, 259

Conread position: 12-366
Cow position:
Alignm length: 381
Alignm identity: 263
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 21, 6

Conread position: 12-367
Cow position:
Alignm length: 359
Alignm identity: 243
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 109, 214

Conread position: 12-378
Cow position:
Alignm length: 372
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 173

Conread position: 12-426
Cow position:
Alignm length: 434
Alignm identity: 288
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 114, 381

Conread position: 12-426
Cow position:
Alignm length: 428
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 86

Conread position: 12-479
Cow position:
Alignm length: 481
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 6

Conread position: 12-479
Cow position:
Alignm length: 483
Alignm identity: 306
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 120, 83

Conread position: 12-479
Cow position:
Alignm length: 475
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 108

Conread position: 12-757
Cow position:
Alignm length: 774
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 138

Conread position: 13-184
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 8, 77

Conread position: 13-207
Cow position:
Alignm length: 198
Alignm identity: 148
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 8, 113

Conread position: 13-210
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 108, 20

Conread position: 13-211
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 13-298
Cow position:
Alignm length: 298
Alignm identity: 206
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 54, 36

Conread position: 13-304
Cow position:
Alignm length: 294
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 97

Conread position: 13-368
Cow position:
Alignm length: 371
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 33

Conread position: 13-381
Cow position:
Alignm length: 380
Alignm identity: 263
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 48, 12

Conread position: 13-381
Cow position:
Alignm length: 379
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 161

Conread position: 13-381
Cow position:
Alignm length: 380
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 164

Conread position: 13-415
Cow position:
Alignm length: 415
Alignm identity: 257
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 134

Conread position: 13-425
Cow position:
Alignm length: 424
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 140

Conread position: 13-447
Cow position:
Alignm length: 447
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 13-451
Cow position:
Alignm length: 446
Alignm identity: 280
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 19, 55

Conread position: 13-760
Cow position:
Alignm length: 767
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 148

Conread position: 14-254
Cow position:
Alignm length: 248
Alignm identity: 183
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 20, 95

Conread position: 15-275
Cow position:
Alignm length: 270
Alignm identity: 199
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 20, 197

Conread position: 15-399
Cow position:
Alignm length: 395
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 27

Conread position: 20-447
Cow position:
Alignm length: 443
Alignm identity: 292
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 120, 86

Conread position: 24-260
Cow position:
Alignm length: 247
Alignm identity: 174
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 98

Conread position: 24-757
Cow position:
Alignm length: 755
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 9

Conread position: 25-217
Cow position:
Alignm length: 197
Alignm identity: 135
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 14, 25

Conread position: 25-274
Cow position:
Alignm length: 252
Alignm identity: 168
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 8, 61

Conread position: 25-276
Cow position:
Alignm length: 260
Alignm identity: 184
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 164, 88

Conread position: 25-298
Cow position:
Alignm length: 276
Alignm identity: 182
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 164, 98

Conread position: 25-435
Cow position:
Alignm length: 424
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 293

Conread position: 25-480
Cow position:
Alignm length: 487
Alignm identity: 313
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 8, 22

Conread position: 26-181
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 26-187
Cow position:
Alignm length: 164
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 26-187
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 26-190
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 140

Conread position: 26-200
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 95, 133

Conread position: 26-211
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 97, 113

Conread position: 26-223
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 98, 133

Conread position: 26-229
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 33, 37

Conread position: 26-276
Cow position:
Alignm length: 251
Alignm identity: 179
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 41, 0

Conread position: 26-294
Cow position:
Alignm length: 277
Alignm identity: 190
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 95, 125

Conread position: 26-298
Cow position:
Alignm length: 282
Alignm identity: 201
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 95, 0

Conread position: 26-298
Cow position:
Alignm length: 281
Alignm identity: 188
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 121

Conread position: 26-355
Cow position:
Alignm length: 336
Alignm identity: 222
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 50

Conread position: 26-368
Cow position:
Alignm length: 361
Alignm identity: 249
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 76, 148

Conread position: 26-381
Cow position:
Alignm length: 361
Alignm identity: 240
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 98, 201

Conread position: 26-381
Cow position:
Alignm length: 361
Alignm identity: 237
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 104, 125

Conread position: 26-381
Cow position:
Alignm length: 366
Alignm identity: 249
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 91, 227

Conread position: 26-381
Cow position:
Alignm length: 366
Alignm identity: 250
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 97, 121

Conread position: 26-382
Cow position:
Alignm length: 367
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 26-384
Cow position:
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 141

Conread position: 26-384
Cow position:
Alignm length: 368
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 138

Conread position: 26-400
Cow position:
Alignm length: 384
Alignm identity: 189
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 84, 125

Conread position: 26-435
Cow position:
Alignm length: 414
Alignm identity: 265
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 98, 195

Conread position: 26-435
Cow position:
Alignm length: 414
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 26-435
Cow position:
Alignm length: 415
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 209

Conread position: 26-436
Cow position:
Alignm length: 421
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 126

Conread position: 26-436
Cow position:
Alignm length: 420
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 63

Conread position: 26-436
Cow position:
Alignm length: 421
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 70

Conread position: 26-444
Cow position:
Alignm length: 428
Alignm identity: 283
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 99, 17

Conread position: 26-444
Cow position:
Alignm length: 429
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 26-444
Cow position:
Alignm length: 429
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 26-447
Cow position:
Alignm length: 430
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 70

Conread position: 26-447
Cow position:
Alignm length: 433
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 234

Conread position: 26-447
Cow position:
Alignm length: 432
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 152

Conread position: 26-447
Cow position:
Alignm length: 430
Alignm identity: 286
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 126, 49

Conread position: 26-456
Cow position:
Alignm length: 446
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 134

Conread position: 26-479
Cow position:
Alignm length: 467
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 133

Conread position: 26-740
Cow position:
Alignm length: 731
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 63

Conread position: 26-746
Cow position:
Alignm length: 728
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 125

Conread position: 26-757
Cow position:
Alignm length: 747
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 98

Conread position: 26-757
Cow position:
Alignm length: 753
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 114

Conread position: 26-759
Cow position:
Alignm length: 754
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 126

Conread position: 26-760
Cow position:
Alignm length: 753
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 126

Conread position: 26-760
Cow position:
Alignm length: 748
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 126

Conread position: 26-760
Cow position:
Alignm length: 753
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 260

Conread position: 26-760
Cow position:
Alignm length: 750
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 94

Conread position: 26-765
Cow position:
Alignm length: 769
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 424

Conread position: 26-1169
Cow position:
Alignm length: 1182
Alignm identity: 729
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 97

Conread position: 27-381
Cow position:
Alignm length: 366
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 219

Conread position: 27-435
Cow position:
Alignm length: 416
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 96

Conread position: 27-442
Cow position:
Alignm length: 426
Alignm identity: 183
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 6, 417

Conread position: 27-444
Cow position:
Alignm length: 433
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 111

Conread position: 27-447
Cow position:
Alignm length: 433
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 29

Conread position: 31-188
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 93, 142

Conread position: 32-186
Cow position:
Alignm length: 158
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 32-289
Cow position:
Alignm length: 260
Alignm identity: 171
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 82, 6

Conread position: 33-351
Cow position:
Alignm length: 331
Alignm identity: 226
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 167, 91

Conread position: 33-399
Cow position:
Alignm length: 375
Alignm identity: 245
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 84, 136

Conread position: 33-399
Cow position:
Alignm length: 376
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 91

Conread position: 34-416
Cow position:
Alignm length: 406
Alignm identity: 282
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 90, 53

Conread position: 35-444
Cow position:
Alignm length: 426
Alignm identity: 279
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 88, 112

Conread position: 36-362
Cow position:
Alignm length: 329
Alignm identity: 224
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 65, 59

Conread position: 37-760
Cow position:
Alignm length: 740
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 87

Conread position: 38-424
Cow position:
Alignm length: 404
Alignm identity: 261
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 79, 97

Conread position: 40-382
Cow position:
Alignm length: 357
Alignm identity: 244
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 64, 260

Conread position: 41-437
Cow position:
Alignm length: 403
Alignm identity: 270
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 75, 233

Conread position: 42-382
Cow position:
Alignm length: 351
Alignm identity: 240
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 67, 54

Conread position: 42-426
Cow position:
Alignm length: 395
Alignm identity: 258
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 8, 63

Conread position: 47-459
Cow position:
Alignm length: 422
Alignm identity: 276
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 145, 20

Conread position: 62-423
Cow position:
Alignm length: 372
Alignm identity: 252
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 64, 90

Conread position: 62-479
Cow position:
Alignm length: 431
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 62-760
Cow position:
Alignm length: 724
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 414

Conread position: 64-361
Cow position:
Alignm length: 305
Alignm identity: 211
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 57, 152

Conread position: 71-378
Cow position:
Alignm length: 317
Alignm identity: 220
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 53, 81

Conread position: 71-447
Cow position:
Alignm length: 392
Alignm identity: 255
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 16, 26

Conread position: 71-458
Cow position:
Alignm length: 399
Alignm identity: 266
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 72, 92

Conread position: 71-1218
Cow position:
Alignm length: 1202
Alignm identity: 739
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 214

Conread position: 71-1220
Cow position:
Alignm length: 1238
Alignm identity: 775
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 24

Conread position: 74-480
Cow position:
Alignm length: 419
Alignm identity: 286
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 56, 22

Conread position: 74-760
Cow position:
Alignm length: 705
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 213

Conread position: 76-390
Cow position:
Alignm length: 320
Alignm identity: 219
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 113, 48

Conread position: 81-382
Cow position:
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 87-444
Cow position:
Alignm length: 368
Alignm identity: 249
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 39, 80

Conread position: 98-276
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 92, 26

Conread position: 98-447
Cow position:
Alignm length: 359
Alignm identity: 238
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 26, 54

Conread position: 99-479
Cow position:
Alignm length: 395
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 45

Conread position: 103-404
Cow position:
Alignm length: 305
Alignm identity: 223
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 18, 73

Conread position: 108-479
Cow position:
Alignm length: 388
Alignm identity: 265
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 13, 163

Conread position: 109-479
Cow position:
Alignm length: 381
Alignm identity: 258
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 15, 60

Conread position: 113-382
Cow position:
Alignm length: 277
Alignm identity: 187
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 38

Conread position: 114-444
Cow position:
Alignm length: 337
Alignm identity: 227
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 78, 37

Conread position: 114-446
Cow position:
Alignm length: 342
Alignm identity: 227
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 79, 0

Conread position: 115-362
Cow position:
Alignm length: 252
Alignm identity: 175
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 83, 21

Conread position: 115-443
Cow position:
Alignm length: 338
Alignm identity: 233
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 77, 249

Conread position: 115-716
Cow position:
Alignm length: 618
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 52

Conread position: 121-741
Cow position:
Alignm length: 632
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 31

Conread position: 122-368
Cow position:
Alignm length: 249
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 13, 89

Conread position: 129-427
Cow position:
Alignm length: 306
Alignm identity: 208
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 29

Conread position: 145-380
Cow position:
Alignm length: 243
Alignm identity: 170
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 48, 142

Conread position: 146-444
Cow position:
Alignm length: 303
Alignm identity: 217
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 19

Conread position: 151-446
Cow position:
Alignm length: 305
Alignm identity: 198
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 30, 117

Conread position: 151-447
Cow position:
Alignm length: 299
Alignm identity: 195
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 80

Conread position: 151-760
Cow position:
Alignm length: 626
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 186

Conread position: 157-390
Cow position:
Alignm length: 240
Alignm identity: 169
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 35, 161

Conread position: 167-453
Cow position:
Alignm length: 297
Alignm identity: 195
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 17

Conread position: 168-381
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 24, 30

Conread position: 173-479
Cow position:
Alignm length: 315
Alignm identity: 205
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 34, 82

Conread position: 175-427
Cow position:
Alignm length: 257
Alignm identity: 170
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 179-447
Cow position:
Alignm length: 278
Alignm identity: 182
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 115

Conread position: 186-426
Cow position:
Alignm length: 244
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 94

Conread position: 189-1222
Cow position:
Alignm length: 1089
Alignm identity: 704
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 21

Conread position: 192-760
Cow position:
Alignm length: 585
Alignm identity: 385
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 23, 12

Conread position: 197-389
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 35, 7

Conread position: 199-736
Cow position:
Alignm length: 552
Alignm identity: 372
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 24, 102

Conread position: 200-760
Cow position:
Alignm length: 569
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 249

Conread position: 208-447
Cow position:
Alignm length: 243
Alignm identity: 163
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 218-447
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 98, 10

Conread position: 218-480
Cow position:
Alignm length: 265
Alignm identity: 172
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 170, 11

Conread position: 222-384
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 222-435
Cow position:
Alignm length: 218
Alignm identity: 149
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 65, 30

Conread position: 222-444
Cow position:
Alignm length: 224
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 167, 141

Conread position: 222-447
Cow position:
Alignm length: 231
Alignm identity: 152
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 222-477
Cow position:
Alignm length: 256
Alignm identity: 172
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 222-479
Cow position:
Alignm length: 260
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 164, 0

Conread position: 222-760
Cow position:
Alignm length: 547
Alignm identity: 355
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 167, 227

Conread position: 222-763
Cow position:
Alignm length: 558
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 13

Conread position: 225-388
Cow position:
Alignm length: 164
Alignm identity: 129
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 225-444
Cow position:
Alignm length: 224
Alignm identity: 160
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 90, 75

Conread position: 225-444
Cow position:
Alignm length: 221
Alignm identity: 152
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 145, 48

Conread position: 226-479
Cow position:
Alignm length: 258
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 163, 29

Conread position: 228-446
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 161, 38

Conread position: 229-760
Cow position:
Alignm length: 543
Alignm identity: 353
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 160, 69

Conread position: 232-435
Cow position:
Alignm length: 208
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 236-746
Cow position:
Alignm length: 526
Alignm identity: 328
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 254, 100

Conread position: 237-415
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 151, 26

Conread position: 237-444
Cow position:
Alignm length: 209
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 151, 14

Conread position: 255-447
Cow position:
Alignm length: 194
Alignm identity: 133
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 133, 0

Conread position: 264-424
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 61

Conread position: 268-726
Cow position:
Alignm length: 469
Alignm identity: 307
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 109, 38

Conread position: 270-458
Cow position:
Alignm length: 191
Alignm identity: 137
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 95, 28

Conread position: 271-479
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 117, 64

Conread position: 282-760
Cow position:
Alignm length: 487
Alignm identity: 321
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 107, 167

Conread position: 310-1222
Cow position:
Alignm length: 971
Alignm identity: 636
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 76

Conread position: 322-775
Cow position:
Alignm length: 462
Alignm identity: 300
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 67, 136

Conread position: 495-1224
Cow position:
Alignm length: 782
Alignm identity: 484
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 27, 494

Conread position: 512-735
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 142

Conread position: 526-759
Cow position:
Alignm length: 240
Alignm identity: 163
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 26, 144

Conread position: 527-761
Cow position:
Alignm length: 242
Alignm identity: 168
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 65

Conread position: 528-710
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 69

Conread position: 533-746
Cow position:
Alignm length: 217
Alignm identity: 149
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 34, 63

Conread position: 537-760
Cow position:
Alignm length: 232
Alignm identity: 156
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 16, 134

Conread position: 542-760
Cow position:
Alignm length: 226
Alignm identity: 152
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 26, 128

Conread position: 550-1170
Cow position:
Alignm length: 654
Alignm identity: 415
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 40

Conread position: 551-760
Cow position:
Alignm length: 216
Alignm identity: 146
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 556-745
Cow position:
Alignm length: 195
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 168

Conread position: 557-750
Cow position:
Alignm length: 202
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 40

Conread position: 575-1224
Cow position:
Alignm length: 668
Alignm identity: 420
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 89, 94

Conread position: 880-1206
Cow position:
Alignm length: 337
Alignm identity: 215
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 19, 194

Conread position: 884-1170
Cow position:
Alignm length: 303
Alignm identity: 211
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 63, 174

Conread position: 884-1223
Cow position:
Alignm length: 350
Alignm identity: 227
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 86, 135

Conread position: 884-1224
Cow position:
Alignm length: 364
Alignm identity: 246
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 66, 28

Conread position: 887-1175
Cow position:
Alignm length: 301
Alignm identity: 206
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 24

Conread position: 888-1170
Cow position:
Alignm length: 292
Alignm identity: 192
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 57, 107

Conread position: 888-1213
Cow position:
Alignm length: 335
Alignm identity: 225
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 76, 9

Conread position: 890-1127
Cow position:
Alignm length: 248
Alignm identity: 170
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 64, 169

Conread position: 890-1224
Cow position:
Alignm length: 343
Alignm identity: 227
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 183, 106

Conread position: 912-1213
Cow position:
Alignm length: 321
Alignm identity: 215
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 30, 189

Conread position: 912-1224
Cow position:
Alignm length: 324
Alignm identity: 209
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 30

Conread position: 949-1159
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 122, 50

Conread position: 949-1175
Cow position:
Alignm length: 228
Alignm identity: 154
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 125, 36

Conread position: 949-1222
Cow position:
Alignm length: 275
Alignm identity: 197
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 121, 65

Conread position: 949-1224
Cow position:
Alignm length: 285
Alignm identity: 187
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 113, 124

Conread position: 950-1224
Cow position:
Alignm length: 285
Alignm identity: 189
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 120, 135

Conread position: 952-1224
Cow position:
Alignm length: 284
Alignm identity: 187
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 9, 148

Conread position: 953-1224
Cow position:
Alignm length: 281
Alignm identity: 195
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 118, 18

Conread position: 1014-1224
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 65

Conread position: 1025-1224
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 49, 33

Show alignments to all cow chromosomes.