Cow genome map

Conread name: Ss1.1-rpliv0129_b1.5.5

Conread position: 2-187
Cow position: chr16:41626337-41626522 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 26, 112

Conread position: 2-265
Cow position: chr16:10770408-10770676 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 190
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 96

Conread position: 2-271
Cow position: chr16:45232900-45233174 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 185
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 103

Conread position: 2-304
Cow position: chr16:32740908-32741218 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 217
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 54

Conread position: 2-341
Cow position: chr16:23319409-23319054 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 178

Conread position: 2-353
Cow position: chr16:9589095-9589455 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 182

Conread position: 2-377
Cow position: chr16:10054514-10054133 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 247
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 31, 50

Conread position: 2-401
Cow position: chr16:32932032-32932426 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 275
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 31, 67

Conread position: 2-416
Cow position: chr16:33923560-33923139 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 32

Conread position: 2-423
Cow position: chr16:42058510-42058949 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 288
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 32, 377

Conread position: 2-432
Cow position: chr16:30999756-31000193 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 68

Conread position: 2-444
Cow position: chr16:20408639-20408200 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 166

Conread position: 2-444
Cow position: chr16:26652143-26652596 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 2-444
Cow position: chr16:49386552-49386989 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 289
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 112

Conread position: 2-447
Cow position: chr16:42735095-42734648 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 309
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 19, 26

Conread position: 2-447
Cow position: chr16:47475545-47475995 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 306
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 65

Conread position: 2-462
Cow position: chr16:24924314-24924782 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 326
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 222, 87

Conread position: 2-477
Cow position: chr16:36164298-36164772 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 47

Conread position: 3-342
Cow position: chr16:3348333-3348681 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 241
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 24, 157

Conread position: 3-381
Cow position: chr16:28469255-28468872 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 3-444
Cow position: chr16:16538337-16538760 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 294
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 24, 95

Conread position: 3-447
Cow position: chr16:624906-625351 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 296
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 24, 115

Conread position: 3-447
Cow position: chr16:15186597-15187046 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 144

Conread position: 4-336
Cow position: chr16:2200538-2200869 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 239
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 31, 106

Conread position: 7-462
Cow position: chr16:18617598-18617142 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 140

Conread position: 8-447
Cow position: chr16:26991417-26990968 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 165

Conread position: 8-479
Cow position: chr16:4847381-4846888 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 59

Conread position: 9-479
Cow position: chr16:23672144-23672619 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 386

Conread position: 9-479
Cow position: chr16:49254716-49254219 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 323
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 180, 126

Conread position: 12-252
Cow position: chr16:818248-818496 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 166
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 12-276
Cow position: chr16:39645187-39645458 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 190
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 139

Conread position: 12-379
Cow position: chr16:16268346-16267984 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 112

Conread position: 12-381
Cow position: chr16:3031961-3031589 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 92

Conread position: 12-409
Cow position: chr16:39614791-39615193 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 276
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 89, 48

Conread position: 12-444
Cow position: chr16:25956027-25955597 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 6

Conread position: 12-447
Cow position: chr16:25172828-25173252 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 288
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 180, 46

Conread position: 12-447
Cow position: chr16:28023485-28023045 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 6

Conread position: 12-479
Cow position: chr16:5891551-5892015 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 6

Conread position: 12-738
Cow position: chr16:41032839-41033554 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 17

Conread position: 13-298
Cow position: chr16:27980835-27980543 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 20, 0

Conread position: 13-321
Cow position: chr16:20666737-20667053 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 215
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 113, 13

Conread position: 13-367
Cow position: chr16:14682114-14681756 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 104

Conread position: 13-379
Cow position: chr16:14663767-14663393 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 138

Conread position: 13-384
Cow position: chr16:29048565-29048946 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 13-427
Cow position: chr16:20642044-20642467 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 197

Conread position: 13-447
Cow position: chr16:3144854-3144419 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 135

Conread position: 13-447
Cow position: chr16:23365372-23364932 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 176

Conread position: 13-447
Cow position: chr16:37479316-37478881 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 204

Conread position: 13-469
Cow position: chr16:52626909-52627376 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 77

Conread position: 13-479
Cow position: chr16:2725684-2725208 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 134

Conread position: 13-750
Cow position: chr16:14620721-14620014 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 37

Conread position: 13-760
Cow position: chr16:838824-839560 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 112

Conread position: 13-760
Cow position: chr16:2409353-2408618 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 90

Conread position: 13-760
Cow position: chr16:3770474-3769734 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 134

Conread position: 13-760
Cow position: chr16:7674924-7674184 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 429

Conread position: 13-760
Cow position: chr16:31587161-31586420 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 423

Conread position: 13-760
Cow position: chr16:52525769-52526508 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 134

Conread position: 14-381
Cow position: chr16:16219949-16220312 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 239
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 177, 27

Conread position: 18-414
Cow position: chr16:32836462-32836860 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 107

Conread position: 18-435
Cow position: chr16:3331457-3331877 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 134

Conread position: 24-405
Cow position: chr16:42804309-42804692 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 164

Conread position: 25-328
Cow position: chr16:36289128-36289427 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 203
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 100

Conread position: 25-332
Cow position: chr16:28435588-28435273 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 222
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 92, 0

Conread position: 25-351
Cow position: chr16:30697166-30696831 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 217
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 141

Conread position: 25-412
Cow position: chr16:19275685-19276075 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 258
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 8, 53

Conread position: 25-424
Cow position: chr16:43693401-43693809 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 263
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 161

Conread position: 25-435
Cow position: chr16:24406463-24406883 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 248

Conread position: 25-674
Cow position: chr16:25948754-25948138 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 418
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 106, 164

Conread position: 26-187
Cow position: chr16:4462794-4462634 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 70

Conread position: 26-197
Cow position: chr16:15568807-15568978 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 163, 94

Conread position: 26-215
Cow position: chr16:48135734-48135549 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 163, 78

Conread position: 26-229
Cow position: chr16:5663396-5663595 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 121

Conread position: 26-229
Cow position: chr16:20192617-20192418 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 91, 125

Conread position: 26-229
Cow position: chr16:25443182-25443387 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 95, 135

Conread position: 26-261
Cow position: chr16:43845667-43845425 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 90, 152

Conread position: 26-264
Cow position: chr16:25127000-25126756 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 100, 180

Conread position: 26-275
Cow position: chr16:54292239-54292482 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 166
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 200, 90

Conread position: 26-277
Cow position: chr16:25463355-25463099 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 95, 125

Conread position: 26-288
Cow position: chr16:56915556-56915289 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 176
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 80, 162

Conread position: 26-298
Cow position: chr16:2890963-2890682 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 26-298
Cow position: chr16:28269508-28269236 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 46

Conread position: 26-349
Cow position: chr16:7647552-7647880 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 229
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 85, 46

Conread position: 26-366
Cow position: chr16:34094-34443 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 26-368
Cow position: chr16:41563931-41564283 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 243
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 166, 51

Conread position: 26-377
Cow position: chr16:16239546-16239190 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 242
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 97, 125

Conread position: 26-381
Cow position: chr16:194348-193998 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 240
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 100, 24

Conread position: 26-381
Cow position: chr16:34505248-34505610 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 127

Conread position: 26-382
Cow position: chr16:27595071-27595432 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 147

Conread position: 26-382
Cow position: chr16:49743878-49743517 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 126

Conread position: 26-392
Cow position: chr16:4799167-4798818 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 259
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 91, 140

Conread position: 26-419
Cow position: chr16:32325403-32325807 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 0

Conread position: 26-435
Cow position: chr16:2237219-2236803 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 139

Conread position: 26-435
Cow position: chr16:16229857-16230280 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 283
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 97, 119

Conread position: 26-435
Cow position: chr16:19672813-19672396 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 289

Conread position: 26-435
Cow position: chr16:25455909-25455494 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 119

Conread position: 26-440
Cow position: chr16:1862002-1862416 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 277
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 95, 63

Conread position: 26-443
Cow position: chr16:5633744-5633339 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 69

Conread position: 26-444
Cow position: chr16:1433740-1434173 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 346

Conread position: 26-444
Cow position: chr16:11284773-11285194 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 140

Conread position: 26-444
Cow position: chr16:23984859-23985287 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 26-444
Cow position: chr16:25087166-25087586 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 70

Conread position: 26-444
Cow position: chr16:28194751-28194323 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 26-444
Cow position: chr16:40294613-40294194 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 111

Conread position: 26-444
Cow position: chr16:41684736-41684316 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 28

Conread position: 26-444
Cow position: chr16:47787507-47787935 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 47

Conread position: 26-444
Cow position: chr16:53446222-53445794 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 26-446
Cow position: chr16:25934709-25935132 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 57

Conread position: 26-447
Cow position: chr16:5487318-5487750 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 26-447
Cow position: chr16:7466162-7466593 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 26-447
Cow position: chr16:8814555-8814121 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 26-447
Cow position: chr16:10439800-10440220 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 159

Conread position: 26-447
Cow position: chr16:29035451-29035877 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 36

Conread position: 26-447
Cow position: chr16:36240708-36241123 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 131

Conread position: 26-447
Cow position: chr16:51086335-51086762 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 125

Conread position: 26-455
Cow position: chr16:15538024-15538443 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 271
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 37

Conread position: 26-456
Cow position: chr16:52523867-52524314 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 294
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 95, 49

Conread position: 26-458
Cow position: chr16:1566119-1565687 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 119

Conread position: 26-479
Cow position: chr16:20203554-20204015 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 36

Conread position: 26-737
Cow position: chr16:10374131-10373414 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 490

Conread position: 26-746
Cow position: chr16:22800121-22799397 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 366

Conread position: 26-760
Cow position: chr16:15980833-15980101 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 139

Conread position: 26-760
Cow position: chr16:21188783-21189534 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 472

Conread position: 26-760
Cow position: chr16:23876975-23876253 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 292

Conread position: 26-760
Cow position: chr16:24622146-24621421 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 78

Conread position: 26-760
Cow position: chr16:25343525-25344254 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 393

Conread position: 26-760
Cow position: chr16:28168769-28168042 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 413

Conread position: 26-760
Cow position: chr16:29207669-29206952 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 304

Conread position: 26-760
Cow position: chr16:41161915-41161182 (view UCSC Genome Browser custom track)
Alignm length: 763
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 292

Conread position: 26-760
Cow position: chr16:47402935-47403660 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 126

Conread position: 26-952
Cow position: chr16:20277402-20278334 (view UCSC Genome Browser custom track)
Alignm length: 960
Alignm identity: 602
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 393

Conread position: 26-952
Cow position: chr16:48103658-48104579 (view UCSC Genome Browser custom track)
Alignm length: 953
Alignm identity: 613
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 28

Conread position: 27-381
Cow position: chr16:2273617-2273975 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 97, 16

Conread position: 27-381
Cow position: chr16:39035148-39034790 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 124

Conread position: 27-447
Cow position: chr16:12536397-12535957 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 27-447
Cow position: chr16:27711596-27711198 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 290
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 204, 79

Conread position: 28-427
Cow position: chr16:42162299-42162703 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 290

Conread position: 28-760
Cow position: chr16:6944829-6945536 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 96

Conread position: 29-426
Cow position: chr16:9024107-9024517 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 62

Conread position: 29-435
Cow position: chr16:52518526-52518930 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 277
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 171, 43

Conread position: 29-444
Cow position: chr16:43895708-43895286 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 123

Conread position: 29-447
Cow position: chr16:26665283-26665696 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 286
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 163, 42

Conread position: 29-447
Cow position: chr16:46521497-46521069 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 29-479
Cow position: chr16:41165200-41164751 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 95

Conread position: 29-736
Cow position: chr16:54323768-54323068 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 429

Conread position: 30-447
Cow position: chr16:27731826-27731402 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 116

Conread position: 32-298
Cow position: chr16:40841968-40842240 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 101, 169

Conread position: 32-443
Cow position: chr16:46224998-46224578 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 280
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 17, 140

Conread position: 33-426
Cow position: chr16:41572954-41573371 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 279
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 84, 264

Conread position: 33-444
Cow position: chr16:4425651-4426070 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 277
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 91, 113

Conread position: 33-444
Cow position: chr16:16992609-16993024 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 274
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 156, 76

Conread position: 34-221
Cow position: chr16:25262028-25262219 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 34-367
Cow position: chr16:339410-339718 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 219
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 37-479
Cow position: chr16:24811520-24811973 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 308
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 87, 63

Conread position: 38-221
Cow position: chr16:55149798-55149980 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 92, 28

Conread position: 38-268
Cow position: chr16:21812088-21812327 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 78, 0

Conread position: 38-479
Cow position: chr16:16031478-16031909 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 309
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 84, 37

Conread position: 42-432
Cow position: chr16:31424411-31424813 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 270
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 82, 169

Conread position: 42-433
Cow position: chr16:42131017-42131412 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 33

Conread position: 43-276
Cow position: chr16:41822434-41822670 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 68, 110

Conread position: 43-447
Cow position: chr16:5654748-5655147 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 282
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 149, 164

Conread position: 45-201
Cow position: chr16:23064948-23064792 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 76, 106

Conread position: 46-208
Cow position: chr16:39365311-39365148 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 78, 144

Conread position: 46-438
Cow position: chr16:23719819-23719426 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 261
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 131, 111

Conread position: 47-447
Cow position: chr16:45705220-45704813 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 205
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 145, 260

Conread position: 47-752
Cow position: chr16:29739507-29738790 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 117

Conread position: 60-382
Cow position: chr16:18496156-18495831 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 224
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 58, 75

Conread position: 68-479
Cow position: chr16:52590113-52589698 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 56

Conread position: 69-427
Cow position: chr16:51402256-51401891 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 250
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 57, 6

Conread position: 71-221
Cow position: chr16:18762571-18762723 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 55, 118

Conread position: 71-445
Cow position: chr16:26653274-26653653 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 251
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 54, 115

Conread position: 71-448
Cow position: chr16:20635914-20635537 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 262
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 136, 49

Conread position: 71-479
Cow position: chr16:34207490-34207899 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 45

Conread position: 71-498
Cow position: chr16:21316044-21316446 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 285
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 156, 25

Conread position: 72-401
Cow position: chr16:8650049-8650386 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 235
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 52, 143

Conread position: 73-479
Cow position: chr16:14069155-14068764 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 282
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 19

Conread position: 74-334
Cow position: chr16:28374372-28374102 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 75-760
Cow position: chr16:3149423-3148754 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 76

Conread position: 77-759
Cow position: chr16:3010442-3011114 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 75

Conread position: 79-404
Cow position: chr16:30050675-30050993 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 226
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 110, 44

Conread position: 85-479
Cow position: chr16:9417076-9416678 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 277
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 39, 14

Conread position: 88-444
Cow position: chr16:15494083-15494436 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 236
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 127

Conread position: 97-455
Cow position: chr16:41198692-41198324 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 245
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 28, 56

Conread position: 98-760
Cow position: chr16:5526481-5525828 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 211

Conread position: 99-367
Cow position: chr16:5875973-5876243 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 52

Conread position: 99-760
Cow position: chr16:23097569-23096888 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 219

Conread position: 102-444
Cow position: chr16:15411420-15411076 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 235
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 22, 50

Conread position: 113-294
Cow position: chr16:16012886-16012702 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 8, 41

Conread position: 113-349
Cow position: chr16:55912119-55911882 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 79, 212

Conread position: 113-447
Cow position: chr16:2481475-2481138 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 238
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 79, 31

Conread position: 113-447
Cow position: chr16:4388374-4388717 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 240
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 77, 203

Conread position: 115-447
Cow position: chr16:37443877-37443540 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 234
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 74, 95

Conread position: 116-444
Cow position: chr16:34531947-34532277 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 226
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 8, 51

Conread position: 116-444
Cow position: chr16:46055688-46056017 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 235
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 73, 169

Conread position: 117-367
Cow position: chr16:54652708-54652464 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 13, 46

Conread position: 122-450
Cow position: chr16:44128189-44127857 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 232
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 70, 43

Conread position: 129-447
Cow position: chr16:5762437-5762771 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 225
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 63, 0

Conread position: 135-427
Cow position: chr16:54181474-54181194 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 69, 14

Conread position: 139-435
Cow position: chr16:43771158-43771455 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 201
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 188

Conread position: 140-435
Cow position: chr16:49220292-49219991 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 199
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 176

Conread position: 140-654
Cow position: chr16:46529972-46529445 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 343
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 57, 46

Conread position: 145-479
Cow position: chr16:4798525-4798176 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 232
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 195

Conread position: 146-480
Cow position: chr16:55866396-55866737 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 233
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 46, 177

Conread position: 152-384
Cow position: chr16:11634475-11634238 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 40, 226

Conread position: 168-390
Cow position: chr16:10966516-10966296 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 138

Conread position: 169-419
Cow position: chr16:29157352-29157609 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 171-445
Cow position: chr16:53632201-53632471 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 21, 55

Conread position: 173-435
Cow position: chr16:2303826-2304095 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 174
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 174-455
Cow position: chr16:1651057-1651352 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 185

Conread position: 175-444
Cow position: chr16:5528889-5529166 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 17, 0

Conread position: 176-760
Cow position: chr16:15811769-15812344 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 280

Conread position: 180-382
Cow position: chr16:50875104-50874899 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 184-526
Cow position: chr16:23800917-23800576 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 227
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 149, 48

Conread position: 198-479
Cow position: chr16:18358819-18359113 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 205
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 23, 191

Conread position: 205-439
Cow position: chr16:7297988-7298221 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 38

Conread position: 215-760
Cow position: chr16:25443623-25444154 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 363
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 15, 10

Conread position: 220-760
Cow position: chr16:12161527-12161003 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 352
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 122, 202

Conread position: 222-362
Cow position: chr16:17111026-17111166 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 222-387
Cow position: chr16:4749088-4748924 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 113, 0

Conread position: 222-401
Cow position: chr16:28681306-28681481 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 166, 135

Conread position: 222-447
Cow position: chr16:416654-416875 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 167, 78

Conread position: 222-495
Cow position: chr16:54085716-54085984 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 17

Conread position: 222-706
Cow position: chr16:13434825-13435296 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 313
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 89, 56

Conread position: 222-730
Cow position: chr16:26092140-26091653 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 297
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 167, 236

Conread position: 222-757
Cow position: chr16:4462572-4462038 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 343
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 167, 191

Conread position: 222-760
Cow position: chr16:15569526-15570045 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 352
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 167, 74

Conread position: 225-423
Cow position: chr16:6647067-6647262 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 161, 0

Conread position: 226-444
Cow position: chr16:20969041-20968822 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 163, 0

Conread position: 227-338
Cow position: chr16:47018471-47018361 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 229-424
Cow position: chr16:7200011-7199815 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 160, 0

Conread position: 229-477
Cow position: chr16:25262389-25262636 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 159, 49

Conread position: 240-479
Cow position: chr16:5057674-5057433 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 148, 115

Conread position: 251-760
Cow position: chr16:11744323-11744817 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 338
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 138, 207

Conread position: 255-760
Cow position: chr16:56861096-56861586 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 338
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 134, 203

Conread position: 319-760
Cow position: chr16:23098164-23098617 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 282
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 27

Conread position: 321-478
Cow position: chr16:29324038-29323878 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 68, 36

Conread position: 326-817
Cow position: chr16:32603990-32604497 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 327
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 41, 31

Conread position: 332-760
Cow position: chr16:13539561-13539148 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 280
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 57, 126

Conread position: 337-760
Cow position: chr16:54431442-54431850 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 279
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 110

Conread position: 495-760
Cow position: chr16:15311284-15311559 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 180
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 495-1224
Cow position: chr16:34207886-34208614 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 81

Conread position: 499-1142
Cow position: chr16:1651365-1652051 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 455
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 28, 94

Conread position: 527-717
Cow position: chr16:38533115-38532925 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 21, 125

Conread position: 530-952
Cow position: chr16:19066521-19066956 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 287
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 22, 68

Conread position: 530-1142
Cow position: chr16:33921703-33921066 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 425
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 22, 320

Conread position: 534-760
Cow position: chr16:18359142-18359370 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 63

Conread position: 537-760
Cow position: chr16:12650976-12651204 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 60

Conread position: 537-783
Cow position: chr16:49463532-49463278 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 16, 134

Conread position: 538-768
Cow position: chr16:19233623-19233392 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 52

Conread position: 544-775
Cow position: chr16:42335263-42335025 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 104

Conread position: 551-760
Cow position: chr16:37478799-37478584 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 18, 72

Conread position: 551-771
Cow position: chr16:416955-417181 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 16, 72

Conread position: 573-1224
Cow position: chr16:14068382-14067725 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 439
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 92, 22

Conread position: 595-1224
Cow position: chr16:16285158-16285807 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 400
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 94, 203

Conread position: 877-1224
Cow position: chr16:44704038-44704399 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 250
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 8, 110

Conread position: 883-1168
Cow position: chr16:37533344-37533637 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 59, 198

Conread position: 884-1170
Cow position: chr16:4748525-4748233 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 200
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 108

Conread position: 884-1208
Cow position: chr16:31504350-31504680 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 227
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 61, 173

Conread position: 884-1210
Cow position: chr16:29864891-29864561 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 218
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 91, 69

Conread position: 884-1224
Cow position: chr16:9590129-9590485 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 241
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 180

Conread position: 884-1224
Cow position: chr16:29323519-29323193 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 234
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 83, 48

Conread position: 884-1224
Cow position: chr16:32284817-32284457 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 240
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 282

Conread position: 884-1224
Cow position: chr16:54213826-54214180 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 247
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 61, 224

Conread position: 886-1209
Cow position: chr16:47015896-47015580 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 220
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 25

Conread position: 888-1206
Cow position: chr16:7648487-7648807 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 205
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 98, 76

Conread position: 906-1224
Cow position: chr16:19327074-19327400 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 223
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 6

Conread position: 921-1224
Cow position: chr16:13406663-13406976 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 207
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 52, 77

Conread position: 934-1224
Cow position: chr16:1037122-1037426 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 211
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 37, 18

Conread position: 949-1157
Cow position: chr16:40382832-40383037 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 122, 140

Conread position: 949-1224
Cow position: chr16:18951495-18951212 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 191
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 111, 143

Conread position: 949-1224
Cow position: chr16:23028832-23029113 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 50, 83

Conread position: 949-1224
Cow position: chr16:31500974-31501245 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 111, 145

Conread position: 957-1224
Cow position: chr16:20124398-20124668 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 116, 72

Conread position: 957-1224
Cow position: chr16:29738550-29738279 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 182
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 111

Conread position: 957-1224
Cow position: chr16:44434792-44435063 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 201
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 81, 91

Conread position: 964-1224
Cow position: chr16:31001248-31001509 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 20

Conread position: 970-1170
Cow position: chr16:19067018-19067217 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 103, 77

Conread position: 1047-1224
Cow position: chr16:48338293-48338475 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 26, 44

Show alignments to all cow chromosomes.