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Cow genome map

           
Conread name:
           
Ss1.1-rpliv0129_b1.5.5
        

               
Conread position:
               
1-408
               

               
Cow position:
               
chr18:33100947-33101355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
32, 95
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr18:42992548-42992116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 39
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr18:16150830-16151286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 164
               

               
Conread position:
               
2-200
               

               
Cow position:
               
chr18:40290450-40290253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
33, 100
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr18:15504860-15505087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr18:23441522-23441219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
31, 279
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr18:34571373-34571065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 23
               

               
Conread position:
               
2-362
               

               
Cow position:
               
chr18:35798552-35798196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 18
               

               
Conread position:
               
2-367
               

               
Cow position:
               
chr18:48390267-48390627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
25, 88
               

               
Conread position:
               
2-383
               

               
Cow position:
               
chr18:35742364-35741983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
187, 31
               

               
Conread position:
               
2-387
               

               
Cow position:
               
chr18:4979488-4979099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 168
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr18:12994312-12994716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 103
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr18:19404188-19403792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
2-400
               

               
Cow position:
               
chr18:55056392-55056789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
23, 36
               

               
Conread position:
               
2-423
               

               
Cow position:
               
chr18:33266651-33267069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
190, 37
               

               
Conread position:
               
2-427
               

               
Cow position:
               
chr18:32770057-32770484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 145
               

               
Conread position:
               
2-444
               

               
Cow position:
               
chr18:29120348-29120778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
33, 152
               

               
Conread position:
               
2-444
               

               
Cow position:
               
chr18:36510931-36511381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 145
               

               
Conread position:
               
2-444
               

               
Cow position:
               
chr18:36647481-36647933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 309
               

               
Conread position:
               
2-447
               

               
Cow position:
               
chr18:29864297-29863842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 184
               

               
Conread position:
               
2-760
               

               
Cow position:
               
chr18:14418281-14419037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
781
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 446
               

               
Conread position:
               
3-382
               

               
Cow position:
               
chr18:19354678-19355059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 44
               

               
Conread position:
               
3-454
               

               
Cow position:
               
chr18:16363996-16363547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
29, 52
               

               
Conread position:
               
3-475
               

               
Cow position:
               
chr18:45399483-45399951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 21
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr18:13826176-13826438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
4-432
               

               
Cow position:
               
chr18:36342177-36342588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 103
               

               
Conread position:
               
4-485
               

               
Cow position:
               
chr18:36210039-36209553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 185
               

               
Conread position:
               
7-267
               

               
Cow position:
               
chr18:14792566-14792295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
8-387
               

               
Cow position:
               
chr18:1046671-1047051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
13, 219
               

               
Conread position:
               
8-447
               

               
Cow position:
               
chr18:51662467-51662913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 11
               

               
Conread position:
               
8-455
               

               
Cow position:
               
chr18:44181665-44181222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
11-740
               

               
Cow position:
               
chr18:37540031-37540753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
759
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
12-221
               

               
Cow position:
               
chr18:53633515-53633721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
109, 133
               

               
Conread position:
               
12-279
               

               
Cow position:
               
chr18:9661038-9661311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
180, 124
               

               
Conread position:
               
12-362
               

               
Cow position:
               
chr18:2364123-2363774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
12-427
               

               
Cow position:
               
chr18:25353570-25353992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 6
               

               
Conread position:
               
12-434
               

               
Cow position:
               
chr18:16136346-16135906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
112, 50
               

               
Conread position:
               
12-447
               

               
Cow position:
               
chr18:56484351-56483914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
193, 112
               

               
Conread position:
               
12-479
               

               
Cow position:
               
chr18:4948265-4948756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 142
               

               
Conread position:
               
12-479
               

               
Cow position:
               
chr18:15171200-15171680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
23, 6
               

               
Conread position:
               
12-479
               

               
Cow position:
               
chr18:20691857-20691400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
178, 76
               

               
Conread position:
               
12-759
               

               
Cow position:
               
chr18:18476480-18475723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
770
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 244
               

               
Conread position:
               
13-320
               

               
Cow position:
               
chr18:21027291-21026980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
13-374
               

               
Cow position:
               
chr18:16360660-16360298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 83
               

               
Conread position:
               
13-394
               

               
Cow position:
               
chr18:27835765-27835374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 161
               

               
Conread position:
               
13-443
               

               
Cow position:
               
chr18:29045347-29044911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
99, 177
               

               
Conread position:
               
13-444
               

               
Cow position:
               
chr18:33344455-33344875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 48
               

               
Conread position:
               
13-447
               

               
Cow position:
               
chr18:36775595-36776040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 293
               

               
Conread position:
               
13-711
               

               
Cow position:
               
chr18:15487382-15486697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 112
               

               
Conread position:
               
13-760
               

               
Cow position:
               
chr18:14128958-14128225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
767
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
19, 44
               

               
Conread position:
               
13-816
               

               
Cow position:
               
chr18:37676851-37677673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
837
               

               
Alignm identity:
               
567
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 89
               

               
Conread position:
               
13-1216
               

               
Cow position:
               
chr18:39813310-39812081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1283
               

               
Alignm identity:
               
822
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 209
               

               
Conread position:
               
14-434
               

               
Cow position:
               
chr18:46875073-46874667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
6, 184
               

               
Conread position:
               
15-402
               

               
Cow position:
               
chr18:13792768-13792386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 56
               

               
Conread position:
               
20-384
               

               
Cow position:
               
chr18:35290889-35291251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
199, 6
               

               
Conread position:
               
20-447
               

               
Cow position:
               
chr18:30609614-30609191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
15, 127
               

               
Conread position:
               
23-383
               

               
Cow position:
               
chr18:33143985-33144353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 151
               

               
Conread position:
               
25-426
               

               
Cow position:
               
chr18:5077733-5077319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 346
               

               
Conread position:
               
25-745
               

               
Cow position:
               
chr18:17960629-17959936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 30
               

               
Conread position:
               
26-228
               

               
Cow position:
               
chr18:47743829-47744033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
100, 12
               

               
Conread position:
               
26-229
               

               
Cow position:
               
chr18:28767135-28767341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
26-271
               

               
Cow position:
               
chr18:54272759-54273015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
37, 102
               

               
Conread position:
               
26-276
               

               
Cow position:
               
chr18:25941236-25941495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
26-276
               

               
Cow position:
               
chr18:32656023-32656282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
26-278
               

               
Cow position:
               
chr18:19457198-19457463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
26-293
               

               
Cow position:
               
chr18:54168548-54168273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
98, 78
               

               
Conread position:
               
26-303
               

               
Cow position:
               
chr18:15852958-15853233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
98, 41
               

               
Conread position:
               
26-317
               

               
Cow position:
               
chr18:43128729-43129033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
66, 130
               

               
Conread position:
               
26-365
               

               
Cow position:
               
chr18:37156411-37156062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
79, 171
               

               
Conread position:
               
26-371
               

               
Cow position:
               
chr18:40158663-40159010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
91, 15
               

               
Conread position:
               
26-404
               

               
Cow position:
               
chr18:21529861-21530247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 126
               

               
Conread position:
               
26-424
               

               
Cow position:
               
chr18:14422602-14423012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
26-435
               

               
Cow position:
               
chr18:43336679-43336269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
54, 99
               

               
Conread position:
               
26-443
               

               
Cow position:
               
chr18:22480842-22481251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
7, 193
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr18:1956836-1956408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr18:30762625-30762197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr18:55417060-55417485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 126
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr18:16174284-16173847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 134
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr18:17322740-17323165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 39
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr18:23702748-23702319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 121
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr18:23801358-23801786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 172
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr18:25922725-25923156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr18:28929251-28928827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 30
               

               
Conread position:
               
26-450
               

               
Cow position:
               
chr18:26244242-26243811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 120
               

               
Conread position:
               
26-460
               

               
Cow position:
               
chr18:35295511-35295954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
98, 20
               

               
Conread position:
               
26-479
               

               
Cow position:
               
chr18:16275391-16274924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
98, 58
               

               
Conread position:
               
26-479
               

               
Cow position:
               
chr18:37491159-37491606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
26-479
               

               
Cow position:
               
chr18:51483930-51484392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 418
               

               
Conread position:
               
26-480
               

               
Cow position:
               
chr18:6459209-6459665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 46
               

               
Conread position:
               
26-480
               

               
Cow position:
               
chr18:17095143-17095609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 176
               

               
Conread position:
               
26-639
               

               
Cow position:
               
chr18:16146677-16146093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 120
               

               
Conread position:
               
26-724
               

               
Cow position:
               
chr18:51344444-51345127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 111
               

               
Conread position:
               
26-725
               

               
Cow position:
               
chr18:3755277-3755967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 430
               

               
Conread position:
               
26-756
               

               
Cow position:
               
chr18:52655150-52655862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 120
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr18:604120-603405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 98
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr18:11272510-11271784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 97
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr18:22183189-22182478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 126
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr18:27538751-27539492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
769
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 127
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr18:29070784-29071481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 140
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr18:32165592-32164872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 147
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr18:37508301-37509028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 251
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr18:37701156-37700433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 256
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr18:38091012-38090298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 158
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr18:51460505-51459782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 125
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr18:52630911-52630198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 139
               

               
Conread position:
               
26-775
               

               
Cow position:
               
chr18:16464521-16463796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 35
               

               
Conread position:
               
26-1169
               

               
Cow position:
               
chr18:16080858-16081995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1161
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 432
               

               
Conread position:
               
27-187
               

               
Cow position:
               
chr18:37664735-37664896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
89, 109
               

               
Conread position:
               
27-447
               

               
Cow position:
               
chr18:27167963-27168398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
27-522
               

               
Cow position:
               
chr18:15857514-15858004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
88, 141
               

               
Conread position:
               
27-760
               

               
Cow position:
               
chr18:32437768-32437042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 338
               

               
Conread position:
               
28-187
               

               
Cow position:
               
chr18:36309997-36310154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
104, 117
               

               
Conread position:
               
28-435
               

               
Cow position:
               
chr18:40343936-40343526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 137
               

               
Conread position:
               
28-468
               

               
Cow position:
               
chr18:9356540-9356090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 18
               

               
Conread position:
               
28-757
               

               
Cow position:
               
chr18:36115102-36114385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 119
               

               
Conread position:
               
29-760
               

               
Cow position:
               
chr18:16092154-16092879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 410
               

               
Conread position:
               
30-294
               

               
Cow position:
               
chr18:23446284-23446009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
30-399
               

               
Cow position:
               
chr18:38606173-38606518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
162, 62
               

               
Conread position:
               
30-447
               

               
Cow position:
               
chr18:40483346-40483758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 116
               

               
Conread position:
               
30-455
               

               
Cow position:
               
chr18:28969947-28969516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 117
               

               
Conread position:
               
31-687
               

               
Cow position:
               
chr18:54026146-54026795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 47
               

               
Conread position:
               
32-258
               

               
Cow position:
               
chr18:6882877-6882644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
85, 53
               

               
Conread position:
               
32-310
               

               
Cow position:
               
chr18:45185194-45185478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
84, 127
               

               
Conread position:
               
32-340
               

               
Cow position:
               
chr18:39745281-39745590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 134
               

               
Conread position:
               
32-361
               

               
Cow position:
               
chr18:29239443-29239772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
92, 119
               

               
Conread position:
               
33-276
               

               
Cow position:
               
chr18:54107486-54107727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
156, 78
               

               
Conread position:
               
34-420
               

               
Cow position:
               
chr18:47187979-47187572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
80, 134
               

               
Conread position:
               
34-479
               

               
Cow position:
               
chr18:35274499-35274942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 23
               

               
Conread position:
               
39-477
               

               
Cow position:
               
chr18:40080333-40079904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
77, 217
               

               
Conread position:
               
39-483
               

               
Cow position:
               
chr18:19269833-19270297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 32
               

               
Conread position:
               
40-690
               

               
Cow position:
               
chr18:51273751-51273135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 129
               

               
Conread position:
               
41-424
               

               
Cow position:
               
chr18:14814589-14814970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
42-382
               

               
Cow position:
               
chr18:51696642-51696991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 268
               

               
Conread position:
               
42-424
               

               
Cow position:
               
chr18:44023841-44024232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
82, 110
               

               
Conread position:
               
43-421
               

               
Cow position:
               
chr18:5680738-5681109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
147, 42
               

               
Conread position:
               
51-480
               

               
Cow position:
               
chr18:37559931-37560361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 112
               

               
Conread position:
               
59-426
               

               
Cow position:
               
chr18:16558072-16558433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
71-390
               

               
Cow position:
               
chr18:11340830-11341140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
21, 35
               

               
Conread position:
               
71-448
               

               
Cow position:
               
chr18:29222751-29223127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
122, 24
               

               
Conread position:
               
72-366
               

               
Cow position:
               
chr18:26747750-26748047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
114, 52
               

               
Conread position:
               
72-760
               

               
Cow position:
               
chr18:54032089-54032777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 367
               

               
Conread position:
               
74-229
               

               
Cow position:
               
chr18:33987841-33987999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
75-384
               

               
Cow position:
               
chr18:33101708-33102019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
46, 230
               

               
Conread position:
               
75-439
               

               
Cow position:
               
chr18:38160476-38160103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
75-480
               

               
Cow position:
               
chr18:5535376-5535780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
49, 239
               

               
Conread position:
               
78-444
               

               
Cow position:
               
chr18:5201911-5202287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
80-760
               

               
Cow position:
               
chr18:18215895-18216569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 387
               

               
Conread position:
               
83-366
               

               
Cow position:
               
chr18:25757373-25757667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
8, 85
               

               
Conread position:
               
97-479
               

               
Cow position:
               
chr18:44403225-44403614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
27, 117
               

               
Conread position:
               
98-402
               

               
Cow position:
               
chr18:33521621-33521932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
28, 54
               

               
Conread position:
               
99-444
               

               
Cow position:
               
chr18:18853609-18853951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
116, 25
               

               
Conread position:
               
101-1223
               

               
Cow position:
               
chr18:39411257-39412374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1186
               

               
Alignm identity:
               
762
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 72
               

               
Conread position:
               
107-382
               

               
Cow position:
               
chr18:28083468-28083752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
115-479
               

               
Cow position:
               
chr18:28674845-28674480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 115
               

               
Conread position:
               
116-283
               

               
Cow position:
               
chr18:43029882-43030051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
107, 41
               

               
Conread position:
               
118-444
               

               
Cow position:
               
chr18:37335856-37336201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
53, 31
               

               
Conread position:
               
120-336
               

               
Cow position:
               
chr18:19474300-19474520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
120-389
               

               
Cow position:
               
chr18:16243638-16243372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
8, 66
               

               
Conread position:
               
123-381
               

               
Cow position:
               
chr18:47711560-47711822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
125-760
               

               
Cow position:
               
chr18:10221464-10222090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 181
               

               
Conread position:
               
151-760
               

               
Cow position:
               
chr18:24618890-24619488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 165
               

               
Conread position:
               
153-422
               

               
Cow position:
               
chr18:17671465-17671194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
70, 18
               

               
Conread position:
               
172-427
               

               
Cow position:
               
chr18:22411872-22412138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
172-723
               

               
Cow position:
               
chr18:54066562-54066031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
20, 84
               

               
Conread position:
               
192-442
               

               
Cow position:
               
chr18:25993759-25994007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
33, 38
               

               
Conread position:
               
219-526
               

               
Cow position:
               
chr18:30847621-30847325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
225, 19
               

               
Conread position:
               
222-382
               

               
Cow position:
               
chr18:34015298-34015458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
222-760
               

               
Cow position:
               
chr18:47744288-47744812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
167, 227
               

               
Conread position:
               
226-444
               

               
Cow position:
               
chr18:26549316-26549528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
183, 93
               

               
Conread position:
               
228-380
               

               
Cow position:
               
chr18:13286136-13285987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
233-447
               

               
Cow position:
               
chr18:22681352-22681560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
233-507
               

               
Cow position:
               
chr18:36253138-36252863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
204, 101
               

               
Conread position:
               
255-444
               

               
Cow position:
               
chr18:39293451-39293261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
287-478
               

               
Cow position:
               
chr18:6059807-6059615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
97, 165
               

               
Conread position:
               
290-479
               

               
Cow position:
               
chr18:28211182-28210990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
156, 186
               

               
Conread position:
               
347-760
               

               
Cow position:
               
chr18:37583797-37583399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
42, 111
               

               
Conread position:
               
354-760
               

               
Cow position:
               
chr18:52573783-52574175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 96
               

               
Conread position:
               
442-1061
               

               
Cow position:
               
chr18:14791683-14791042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
7, 26
               

               
Conread position:
               
495-756
               

               
Cow position:
               
chr18:33138266-33138003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
34, 6
               

               
Conread position:
               
509-747
               

               
Cow position:
               
chr18:37560841-37561087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
15, 244
               

               
Conread position:
               
511-1220
               

               
Cow position:
               
chr18:36123029-36122297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
520-966
               

               
Cow position:
               
chr18:25199596-25200047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
47, 57
               

               
Conread position:
               
526-830
               

               
Cow position:
               
chr18:23445695-23445376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 172
               

               
Conread position:
               
530-1209
               

               
Cow position:
               
chr18:31381882-31382592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
22, 393
               

               
Conread position:
               
534-729
               

               
Cow position:
               
chr18:45399983-45400177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
537-783
               

               
Cow position:
               
chr18:9981449-9981703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
16, 134
               

               
Conread position:
               
574-1220
               

               
Cow position:
               
chr18:6091963-6091334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
123, 128
               

               
Conread position:
               
576-738
               

               
Cow position:
               
chr18:33144483-33144647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 94
               

               
Conread position:
               
579-792
               

               
Cow position:
               
chr18:26748339-26748564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
21, 114
               

               
Conread position:
               
592-1224
               

               
Cow position:
               
chr18:51330767-51331405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 101
               

               
Conread position:
               
771-1217
               

               
Cow position:
               
chr18:30846957-30846501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
71, 34
               

               
Conread position:
               
773-1139
               

               
Cow position:
               
chr18:33347184-33347563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
100, 47
               

               
Conread position:
               
773-1222
               

               
Cow position:
               
chr18:44403933-44404400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
84, 46
               

               
Conread position:
               
812-1174
               

               
Cow position:
               
chr18:23463818-23463473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
259, 81
               

               
Conread position:
               
866-1133
               

               
Cow position:
               
chr18:6460035-6460306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
879-1224
               

               
Cow position:
               
chr18:14407012-14406649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
66, 6
               

               
Conread position:
               
883-1224
               

               
Cow position:
               
chr18:7444727-7445088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
73, 277
               

               
Conread position:
               
884-1061
               

               
Cow position:
               
chr18:10978214-10978389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
884-1222
               

               
Cow position:
               
chr18:51250879-51251235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
69, 138
               

               
Conread position:
               
884-1224
               

               
Cow position:
               
chr18:23682683-23682341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 21
               

               
Conread position:
               
885-1170
               

               
Cow position:
               
chr18:40078963-40078667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
59, 198
               

               
Conread position:
               
885-1177
               

               
Cow position:
               
chr18:47999526-47999241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
51, 125
               

               
Conread position:
               
886-1170
               

               
Cow position:
               
chr18:30111199-30110909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 24
               

               
Conread position:
               
889-1224
               

               
Cow position:
               
chr18:51246877-51247236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 270
               

               
Conread position:
               
912-1224
               

               
Cow position:
               
chr18:36605820-36606141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
42, 156
               

               
Conread position:
               
957-1224
               

               
Cow position:
               
chr18:6376835-6377106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
103, 25
               

               
Conread position:
               
957-1224
               

               
Cow position:
               
chr18:37677998-37678271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
90, 151
               

               
Conread position:
               
957-1224
               

               
Cow position:
               
chr18:41957811-41958092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
69, 53
               
Show alignments to all cow chromosomes.