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Cow genome map

           
Conread name:
           
Ss1.1-rpliv0129_b1.5.5
        

               
Conread position:
               
1-456
               

               
Cow position:
               
chr19:4780473-4780917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
31, 145
               

               
Conread position:
               
2-156
               

               
Cow position:
               
chr19:28789694-28789537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-210
               

               
Cow position:
               
chr19:27608292-27608083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
27, 84
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr19:31379665-31379437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
27, 105
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr19:19177112-19176837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 114
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr19:53510269-53510546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
30, 105
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr19:44279091-44278816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
116, 30
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr19:4302577-4302889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr19:23021267-23021541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
2-368
               

               
Cow position:
               
chr19:30560489-30560855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 145
               

               
Conread position:
               
2-371
               

               
Cow position:
               
chr19:45333912-45334288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 161
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr19:28718835-28719215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 175
               

               
Conread position:
               
2-407
               

               
Cow position:
               
chr19:32138606-32138194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 289
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr19:2587514-2587929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
2-429
               

               
Cow position:
               
chr19:41717714-41718129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 113
               

               
Conread position:
               
2-479
               

               
Cow position:
               
chr19:32719137-32719613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 16
               

               
Conread position:
               
2-479
               

               
Cow position:
               
chr19:38559970-38559486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
2-740
               

               
Cow position:
               
chr19:354859-354130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
82, 30
               

               
Conread position:
               
3-229
               

               
Cow position:
               
chr19:2271800-2271573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
31, 143
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr19:774937-775199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
3-359
               

               
Cow position:
               
chr19:11197236-11196880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
103, 86
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chr19:40660-41103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
24, 165
               

               
Conread position:
               
3-760
               

               
Cow position:
               
chr19:7481622-7480869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
777
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 461
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr19:36470600-36470936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
4-484
               

               
Cow position:
               
chr19:41787397-41786920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 163
               

               
Conread position:
               
5-359
               

               
Cow position:
               
chr19:21212495-21212135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
24, 79
               

               
Conread position:
               
5-478
               

               
Cow position:
               
chr19:2736107-2736586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
29, 66
               

               
Conread position:
               
8-197
               

               
Cow position:
               
chr19:29085982-29086174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
21, 184
               

               
Conread position:
               
8-381
               

               
Cow position:
               
chr19:28795998-28795627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
25, 49
               

               
Conread position:
               
11-1218
               

               
Cow position:
               
chr19:3175805-3177030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1272
               

               
Alignm identity:
               
797
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 7
               

               
Conread position:
               
12-180
               

               
Cow position:
               
chr19:36418296-36418465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
99, 7
               

               
Conread position:
               
12-379
               

               
Cow position:
               
chr19:6499814-6500162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 35
               

               
Conread position:
               
12-427
               

               
Cow position:
               
chr19:35382823-35382403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 74
               

               
Conread position:
               
12-441
               

               
Cow position:
               
chr19:28404243-28403806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
114, 274
               

               
Conread position:
               
12-447
               

               
Cow position:
               
chr19:42297801-42297346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 6
               

               
Conread position:
               
13-211
               

               
Cow position:
               
chr19:18708263-18708074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
177, 26
               

               
Conread position:
               
13-234
               

               
Cow position:
               
chr19:11828586-11828367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
8, 106
               

               
Conread position:
               
13-240
               

               
Cow position:
               
chr19:16129691-16129915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
176, 108
               

               
Conread position:
               
13-347
               

               
Cow position:
               
chr19:47098446-47098800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 72
               

               
Conread position:
               
13-364
               

               
Cow position:
               
chr19:34657188-34656852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
184, 42
               

               
Conread position:
               
13-377
               

               
Cow position:
               
chr19:44032796-44033161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
13-381
               

               
Cow position:
               
chr19:28579365-28578995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 83
               

               
Conread position:
               
13-404
               

               
Cow position:
               
chr19:36148972-36149389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
13-407
               

               
Cow position:
               
chr19:4841372-4840998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
83, 46
               

               
Conread position:
               
13-444
               

               
Cow position:
               
chr19:39183214-39182773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
13-447
               

               
Cow position:
               
chr19:3141960-3142414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
20, 135
               

               
Conread position:
               
13-479
               

               
Cow position:
               
chr19:33640424-33640876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
13-479
               

               
Cow position:
               
chr19:35993695-35994152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
13-760
               

               
Cow position:
               
chr19:7344358-7345099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
769
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 88
               

               
Conread position:
               
13-760
               

               
Cow position:
               
chr19:33875742-33876481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
769
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 44
               

               
Conread position:
               
13-760
               

               
Cow position:
               
chr19:40850160-40849422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
768
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 405
               

               
Conread position:
               
14-757
               

               
Cow position:
               
chr19:1584792-1585529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 468
               

               
Conread position:
               
15-442
               

               
Cow position:
               
chr19:13133622-13133193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 69
               

               
Conread position:
               
15-477
               

               
Cow position:
               
chr19:32708507-32708972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
15-479
               

               
Cow position:
               
chr19:3586811-3586338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 115
               

               
Conread position:
               
15-743
               

               
Cow position:
               
chr19:12701116-12701843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
106, 146
               

               
Conread position:
               
20-320
               

               
Cow position:
               
chr19:3644265-3644561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
170, 73
               

               
Conread position:
               
25-341
               

               
Cow position:
               
chr19:32498407-32498084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
8, 127
               

               
Conread position:
               
26-210
               

               
Cow position:
               
chr19:5899166-5898982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
87, 125
               

               
Conread position:
               
26-269
               

               
Cow position:
               
chr19:17019890-17020137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
95, 121
               

               
Conread position:
               
26-296
               

               
Cow position:
               
chr19:37683280-37683549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
100, 140
               

               
Conread position:
               
26-298
               

               
Cow position:
               
chr19:24727337-24727060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
75, 69
               

               
Conread position:
               
26-337
               

               
Cow position:
               
chr19:33649848-33649525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
26-342
               

               
Cow position:
               
chr19:42305324-42305028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
26-381
               

               
Cow position:
               
chr19:375357-374992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
108, 64
               

               
Conread position:
               
26-381
               

               
Cow position:
               
chr19:38810770-38811111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
163, 77
               

               
Conread position:
               
26-381
               

               
Cow position:
               
chr19:39666208-39665848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 22
               

               
Conread position:
               
26-381
               

               
Cow position:
               
chr19:44758449-44758094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
163, 86
               

               
Conread position:
               
26-384
               

               
Cow position:
               
chr19:39392851-39393216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 56
               

               
Conread position:
               
26-401
               

               
Cow position:
               
chr19:206844-207228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 132
               

               
Conread position:
               
26-427
               

               
Cow position:
               
chr19:40834922-40834514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 140
               

               
Conread position:
               
26-435
               

               
Cow position:
               
chr19:159525-159097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
85, 343
               

               
Conread position:
               
26-435
               

               
Cow position:
               
chr19:33943910-33944323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 69
               

               
Conread position:
               
26-436
               

               
Cow position:
               
chr19:3088981-3088563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 346
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr19:165783-165362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 135
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr19:1586905-1586488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
82, 34
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr19:4387933-4388350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr19:7490440-7490868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 126
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr19:12775462-12775893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 354
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr19:20107064-20107511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
26-455
               

               
Cow position:
               
chr19:5717294-5716838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
26-456
               

               
Cow position:
               
chr19:5248449-5248017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
43, 295
               

               
Conread position:
               
26-477
               

               
Cow position:
               
chr19:24673153-24672693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
26-479
               

               
Cow position:
               
chr19:257653-258115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
41, 46
               

               
Conread position:
               
26-479
               

               
Cow position:
               
chr19:16318270-16317806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 290
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr19:15445521-15444798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 98
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr19:20610671-20611399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 366
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr19:21338504-21337767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 442
               

               
Conread position:
               
26-765
               

               
Cow position:
               
chr19:5731852-5732569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 97
               

               
Conread position:
               
27-224
               

               
Cow position:
               
chr19:3113717-3113916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
9, 186
               

               
Conread position:
               
27-382
               

               
Cow position:
               
chr19:22511433-22511076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 125
               

               
Conread position:
               
27-383
               

               
Cow position:
               
chr19:43147014-43147379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
27-435
               

               
Cow position:
               
chr19:40885404-40884989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
94, 125
               

               
Conread position:
               
27-444
               

               
Cow position:
               
chr19:748914-748502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
7, 32
               

               
Conread position:
               
29-760
               

               
Cow position:
               
chr19:52149192-52148484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 118
               

               
Conread position:
               
31-760
               

               
Cow position:
               
chr19:13063776-13064502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 245
               

               
Conread position:
               
32-433
               

               
Cow position:
               
chr19:5782170-5781774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 137
               

               
Conread position:
               
38-340
               

               
Cow position:
               
chr19:23865816-23865508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
154, 75
               

               
Conread position:
               
42-394
               

               
Cow position:
               
chr19:4553249-4552908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
51-426
               

               
Cow position:
               
chr19:9116347-9115973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
134, 77
               

               
Conread position:
               
52-442
               

               
Cow position:
               
chr19:33905436-33905825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 260
               

               
Conread position:
               
71-419
               

               
Cow position:
               
chr19:28368802-28369134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
18, 6
               

               
Conread position:
               
75-760
               

               
Cow position:
               
chr19:28595773-28596440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 72
               

               
Conread position:
               
76-447
               

               
Cow position:
               
chr19:25020890-25020517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
114, 37
               

               
Conread position:
               
77-390
               

               
Cow position:
               
chr19:42260756-42260445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 7
               

               
Conread position:
               
96-389
               

               
Cow position:
               
chr19:36999938-36999654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 130
               

               
Conread position:
               
97-455
               

               
Cow position:
               
chr19:44004709-44005081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
29, 57
               

               
Conread position:
               
98-346
               

               
Cow position:
               
chr19:30475134-30474885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 209
               

               
Conread position:
               
98-418
               

               
Cow position:
               
chr19:3402582-3402259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
99-479
               

               
Cow position:
               
chr19:18447352-18447730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 66
               

               
Conread position:
               
113-381
               

               
Cow position:
               
chr19:25378367-25378639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
113-692
               

               
Cow position:
               
chr19:47094650-47095216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
22, 53
               

               
Conread position:
               
115-480
               

               
Cow position:
               
chr19:39345506-39345142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 55
               

               
Conread position:
               
118-426
               

               
Cow position:
               
chr19:24691866-24692161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
87, 6
               

               
Conread position:
               
128-311
               

               
Cow position:
               
chr19:42212742-42212552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
130-389
               

               
Cow position:
               
chr19:40068844-40068565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
53, 252
               

               
Conread position:
               
130-399
               

               
Cow position:
               
chr19:48026928-48026646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
23, 143
               

               
Conread position:
               
131-387
               

               
Cow position:
               
chr19:28328824-28329068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
66, 61
               

               
Conread position:
               
138-769
               

               
Cow position:
               
chr19:19388273-19388908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 178
               

               
Conread position:
               
139-479
               

               
Cow position:
               
chr19:18359842-18359497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
146-387
               

               
Cow position:
               
chr19:29369661-29369416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
45, 167
               

               
Conread position:
               
146-387
               

               
Cow position:
               
chr19:29627167-29626921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
45, 168
               

               
Conread position:
               
148-295
               

               
Cow position:
               
chr19:38066690-38066845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
150-369
               

               
Cow position:
               
chr19:18070687-18070911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
151-736
               

               
Cow position:
               
chr19:39749691-39750264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 159
               

               
Conread position:
               
157-435
               

               
Cow position:
               
chr19:35981248-35981535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 167
               

               
Conread position:
               
159-402
               

               
Cow position:
               
chr19:30757692-30757942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
40, 149
               

               
Conread position:
               
159-479
               

               
Cow position:
               
chr19:5901045-5901373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
33, 111
               

               
Conread position:
               
167-447
               

               
Cow position:
               
chr19:40017091-40016810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
25, 65
               

               
Conread position:
               
173-382
               

               
Cow position:
               
chr19:55165568-55165353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
19, 5
               

               
Conread position:
               
175-760
               

               
Cow position:
               
chr19:475008-474431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 290
               

               
Conread position:
               
179-738
               

               
Cow position:
               
chr19:22390964-22390429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
13, 286
               

               
Conread position:
               
183-421
               

               
Cow position:
               
chr19:55694210-55693967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
40, 177
               

               
Conread position:
               
190-760
               

               
Cow position:
               
chr19:890690-890131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
27, 7
               

               
Conread position:
               
222-427
               

               
Cow position:
               
chr19:55842330-55842532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
167, 92
               

               
Conread position:
               
222-434
               

               
Cow position:
               
chr19:1151226-1151429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
166, 65
               

               
Conread position:
               
222-435
               

               
Cow position:
               
chr19:12553692-12553477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
222-447
               

               
Cow position:
               
chr19:266484-266710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
71, 218
               

               
Conread position:
               
222-448
               

               
Cow position:
               
chr19:343947-344173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
222-480
               

               
Cow position:
               
chr19:20126567-20126820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
238, 129
               

               
Conread position:
               
222-758
               

               
Cow position:
               
chr19:6554522-6555041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
167, 98
               

               
Conread position:
               
222-760
               

               
Cow position:
               
chr19:30517349-30517868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
167, 78
               

               
Conread position:
               
224-480
               

               
Cow position:
               
chr19:36418544-36418801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 5
               

               
Conread position:
               
227-458
               

               
Cow position:
               
chr19:28741332-28741103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
126, 131
               

               
Conread position:
               
229-447
               

               
Cow position:
               
chr19:2270748-2270529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
249-479
               

               
Cow position:
               
chr19:40037648-40037879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 58
               

               
Conread position:
               
280-479
               

               
Cow position:
               
chr19:42212554-42212359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
103, 64
               

               
Conread position:
               
310-446
               

               
Cow position:
               
chr19:33440721-33440588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
127, 81
               

               
Conread position:
               
474-816
               

               
Cow position:
               
chr19:44755296-44754949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 23
               

               
Conread position:
               
490-759
               

               
Cow position:
               
chr19:16109413-16109689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 103
               

               
Conread position:
               
493-719
               

               
Cow position:
               
chr19:36990411-36990640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
38, 104
               

               
Conread position:
               
494-819
               

               
Cow position:
               
chr19:18447716-18448044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 47
               

               
Conread position:
               
495-723
               

               
Cow position:
               
chr19:28722099-28722333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 14
               

               
Conread position:
               
495-945
               

               
Cow position:
               
chr19:4780920-4781356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
497-952
               

               
Cow position:
               
chr19:4552303-4551842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
32, 51
               

               
Conread position:
               
500-696
               

               
Cow position:
               
chr19:42256648-42256448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
27, 181
               

               
Conread position:
               
501-725
               

               
Cow position:
               
chr19:50573765-50573989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 159
               

               
Conread position:
               
521-690
               

               
Cow position:
               
chr19:47041571-47041396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
525-812
               

               
Cow position:
               
chr19:29970500-29970196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
526-756
               

               
Cow position:
               
chr19:4840616-4840384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
42, 70
               

               
Conread position:
               
526-1170
               

               
Cow position:
               
chr19:47099706-47100372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 95
               

               
Conread position:
               
526-1224
               

               
Cow position:
               
chr19:23021774-23022453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
48, 153
               

               
Conread position:
               
538-725
               

               
Cow position:
               
chr19:40037896-40038081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
542-760
               

               
Cow position:
               
chr19:2968560-2968780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
84, 201
               

               
Conread position:
               
550-723
               

               
Cow position:
               
chr19:32758263-32758438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 121
               

               
Conread position:
               
551-746
               

               
Cow position:
               
chr19:27209546-27209350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
17, 113
               

               
Conread position:
               
562-725
               

               
Cow position:
               
chr19:24293817-24293656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
76, 9
               

               
Conread position:
               
573-739
               

               
Cow position:
               
chr19:24308597-24308427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
92, 96
               

               
Conread position:
               
577-1170
               

               
Cow position:
               
chr19:37843057-37842438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
152, 315
               

               
Conread position:
               
771-1071
               

               
Cow position:
               
chr19:16180727-16180442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
774-1218
               

               
Cow position:
               
chr19:55367698-55367253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
113, 45
               

               
Conread position:
               
839-1218
               

               
Cow position:
               
chr19:5890116-5890504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 143
               

               
Conread position:
               
884-1125
               

               
Cow position:
               
chr19:24230715-24230953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
163, 63
               

               
Conread position:
               
884-1223
               

               
Cow position:
               
chr19:18255246-18255605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 69
               

               
Conread position:
               
884-1224
               

               
Cow position:
               
chr19:24672279-24671922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
63, 238
               

               
Conread position:
               
885-1171
               

               
Cow position:
               
chr19:44754803-44754509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
71, 195
               

               
Conread position:
               
885-1224
               

               
Cow position:
               
chr19:49882585-49882929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
114, 57
               

               
Conread position:
               
888-1224
               

               
Cow position:
               
chr19:19461755-19462101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
60, 205
               

               
Conread position:
               
919-1099
               

               
Cow position:
               
chr19:7445521-7445704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 5
               

               
Conread position:
               
919-1170
               

               
Cow position:
               
chr19:6614329-6614590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
37, 142
               

               
Conread position:
               
934-1170
               

               
Cow position:
               
chr19:23864804-23864572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 60
               

               
Conread position:
               
949-1224
               

               
Cow position:
               
chr19:43510902-43511184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
123, 142
               

               
Conread position:
               
952-1224
               

               
Cow position:
               
chr19:35171596-35171320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
18, 117
               

               
Conread position:
               
957-1224
               

               
Cow position:
               
chr19:21241746-21242013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
81, 135
               

               
Conread position:
               
958-1224
               

               
Cow position:
               
chr19:14228966-14228702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
168, 107
               

               
Conread position:
               
958-1224
               

               
Cow position:
               
chr19:49401291-49401552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
115, 61
               

               
Conread position:
               
1022-1224
               

               
Cow position:
               
chr19:35432283-35432076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
51, 69
               
Show alignments to all cow chromosomes.