Cow genome map
| Conread name: | Ss1.1-rpliv0129_b1.5.5 |
| Conread position: | 1-305 |
| Cow position: | chr20:29119566-29119888 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 28, 264 |
| Conread position: | 2-188 |
| Cow position: | chr20:24484615-24484800 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 31, 53 |
| Conread position: | 2-427 |
| Cow position: | chr20:25332661-25332231 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 189 |
| Conread position: | 2-479 |
| Cow position: | chr20:5936698-5936238 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 322 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 30, 52 |
| Conread position: | 2-479 |
| Cow position: | chr20:13073182-13073654 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 314 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 28, 66 |
| Conread position: | 2-481 |
| Cow position: | chr20:28101611-28102088 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 325 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 3-444 |
| Cow position: | chr20:27875761-27876210 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 69 |
| Conread position: | 3-446 |
| Cow position: | chr20:20185045-20185478 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 57 |
| Conread position: | 3-447 |
| Cow position: | chr20:5537209-5537660 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 150 |
| Conread position: | 3-447 |
| Cow position: | chr20:15294256-15294699 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 125 |
| Conread position: | 4-335 |
| Cow position: | chr20:20389025-20388687 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 28, 250 |
| Conread position: | 4-441 |
| Cow position: | chr20:2717552-2717991 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 8-222 |
| Cow position: | chr20:16020523-16020307 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 123 |
| Conread position: | 8-349 |
| Cow position: | chr20:36187070-36187415 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 11-298 |
| Cow position: | chr20:22396695-22396417 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 119, 38 |
| Conread position: | 12-207 |
| Cow position: | chr20:3499664-3499465 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 12-216 |
| Cow position: | chr20:6014599-6014390 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 12-404 |
| Cow position: | chr20:28756253-28756613 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 271 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 9, 49 |
| Conread position: | 12-426 |
| Cow position: | chr20:10037488-10037095 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 303, 6 |
| Conread position: | 12-444 |
| Cow position: | chr20:870715-870278 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 300 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 10, 15 |
| Conread position: | 12-444 |
| Cow position: | chr20:19424344-19424768 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 297 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 21, 6 |
| Conread position: | 12-445 |
| Cow position: | chr20:3307143-3307577 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 60 |
| Conread position: | 12-446 |
| Cow position: | chr20:24519400-24519830 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 15, 6 |
| Conread position: | 12-455 |
| Cow position: | chr20:27345660-27345227 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 300 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 9, 112 |
| Conread position: | 12-479 |
| Cow position: | chr20:12578515-12578980 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 300 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 7, 162 |
| Conread position: | 12-480 |
| Cow position: | chr20:10495286-10495752 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 305 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 68, 106 |
| Conread position: | 13-342 |
| Cow position: | chr20:12548119-12547786 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 20, 214 |
| Conread position: | 13-384 |
| Cow position: | chr20:15095611-15095234 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 259 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 19, 112 |
| Conread position: | 13-427 |
| Cow position: | chr20:28293617-28294030 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 281 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 54, 107 |
| Conread position: | 13-444 |
| Cow position: | chr20:10922632-10922193 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 205 |
| Conread position: | 13-444 |
| Cow position: | chr20:13765184-13765625 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 285 |
| Conread position: | 13-444 |
| Cow position: | chr20:21396818-21397249 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 293 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 14, 139 |
| Conread position: | 13-444 |
| Cow position: | chr20:35126954-35127399 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 291 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 20, 44 |
| Conread position: | 13-447 |
| Cow position: | chr20:23805590-23805146 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 13-760 |
| Cow position: | chr20:7598565-7597829 (view UCSC Genome Browser custom track) |
| Alignm length: | 767 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 221 |
| Conread position: | 13-760 |
| Cow position: | chr20:23467377-23466622 (view UCSC Genome Browser custom track) |
| Alignm length: | 772 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 347 |
| Conread position: | 13-816 |
| Cow position: | chr20:23801178-23801996 (view UCSC Genome Browser custom track) |
| Alignm length: | 834 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 388 |
| Conread position: | 14-294 |
| Cow position: | chr20:9621158-9621423 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 102, 44 |
| Conread position: | 14-479 |
| Cow position: | chr20:5226242-5225793 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 317 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 20, 41 |
| Conread position: | 17-444 |
| Cow position: | chr20:10867494-10867061 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 148 |
| Conread position: | 18-245 |
| Cow position: | chr20:19342106-19342337 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 25-207 |
| Cow position: | chr20:21916946-21917131 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 25-387 |
| Cow position: | chr20:28959254-28958888 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 256 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 99, 158 |
| Conread position: | 25-388 |
| Cow position: | chr20:13339592-13339247 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 31 |
| Conread position: | 25-424 |
| Cow position: | chr20:7513640-7514059 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 188 |
| Conread position: | 25-476 |
| Cow position: | chr20:7569788-7569335 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 85 |
| Conread position: | 25-478 |
| Cow position: | chr20:2653445-2653894 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 308 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 99, 52 |
| Conread position: | 25-479 |
| Cow position: | chr20:4242366-4242823 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 295 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 8, 78 |
| Conread position: | 26-229 |
| Cow position: | chr20:15602461-15602255 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 26-237 |
| Cow position: | chr20:10493494-10493703 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 8 |
| Conread position: | 26-280 |
| Cow position: | chr20:13788413-13788667 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 97, 163 |
| Conread position: | 26-310 |
| Cow position: | chr20:28280116-28280409 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 129, 95 |
| Conread position: | 26-340 |
| Cow position: | chr20:29757977-29757658 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 283 |
| Conread position: | 26-366 |
| Cow position: | chr20:8753916-8754247 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 28 |
| Conread position: | 26-381 |
| Cow position: | chr20:14722079-14721714 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 254 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 98, 70 |
| Conread position: | 26-382 |
| Cow position: | chr20:16177454-16177098 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 251 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 100, 32 |
| Conread position: | 26-402 |
| Cow position: | chr20:20752534-20752160 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 258 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 166, 98 |
| Conread position: | 26-427 |
| Cow position: | chr20:30385924-30385535 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 164 |
| Conread position: | 26-435 |
| Cow position: | chr20:17659442-17659027 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 120 |
| Conread position: | 26-435 |
| Cow position: | chr20:22696720-22696327 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 280 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 89, 51 |
| Conread position: | 26-444 |
| Cow position: | chr20:18093884-18093458 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 336 |
| Conread position: | 26-444 |
| Cow position: | chr20:30578192-30578616 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 292 |
| Conread position: | 26-444 |
| Cow position: | chr20:30687875-30688301 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 273 |
| Conread position: | 26-445 |
| Cow position: | chr20:12046816-12047242 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 71 |
| Conread position: | 26-445 |
| Cow position: | chr20:32150243-32150660 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 293 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 6, 29 |
| Conread position: | 26-447 |
| Cow position: | chr20:13654975-13654560 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 67 |
| Conread position: | 26-447 |
| Cow position: | chr20:20440649-20440220 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 185 |
| Conread position: | 26-447 |
| Cow position: | chr20:28163349-28163776 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 39 |
| Conread position: | 26-730 |
| Cow position: | chr20:19440219-19440912 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 121 |
| Conread position: | 26-760 |
| Cow position: | chr20:12436093-12435367 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 126 |
| Conread position: | 26-760 |
| Cow position: | chr20:21718866-21719586 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 372 |
| Conread position: | 26-760 |
| Cow position: | chr20:30430575-30431300 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 126 |
| Conread position: | 26-763 |
| Cow position: | chr20:35160277-35159551 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 126 |
| Conread position: | 26-775 |
| Cow position: | chr20:825083-825822 (view UCSC Genome Browser custom track) |
| Alignm length: | 768 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 152 |
| Conread position: | 27-294 |
| Cow position: | chr20:32155040-32154759 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 6, 149 |
| Conread position: | 27-443 |
| Cow position: | chr20:14868063-14867655 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 79 |
| Conread position: | 27-760 |
| Cow position: | chr20:24541726-24542454 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 183 |
| Conread position: | 28-444 |
| Cow position: | chr20:28445041-28444619 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 39 |
| Conread position: | 28-459 |
| Cow position: | chr20:36703694-36704141 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 49 |
| Conread position: | 29-442 |
| Cow position: | chr20:25846310-25845894 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 83 |
| Conread position: | 29-447 |
| Cow position: | chr20:8971575-8971160 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 99 |
| Conread position: | 32-210 |
| Cow position: | chr20:1535312-1535489 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 157, 88 |
| Conread position: | 32-399 |
| Cow position: | chr20:5076314-5076684 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 43 |
| Conread position: | 34-278 |
| Cow position: | chr20:39881650-39881903 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 87, 106 |
| Conread position: | 34-426 |
| Cow position: | chr20:24518254-24518644 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 20 |
| Conread position: | 34-447 |
| Cow position: | chr20:19876265-19876661 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 278 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 82, 115 |
| Conread position: | 36-389 |
| Cow position: | chr20:3677996-3677659 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 252 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 181, 18 |
| Conread position: | 38-444 |
| Cow position: | chr20:752460-752876 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 43-405 |
| Cow position: | chr20:35144562-35144194 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 254 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 81, 264 |
| Conread position: | 45-444 |
| Cow position: | chr20:34459984-34459580 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 55 |
| Conread position: | 49-359 |
| Cow position: | chr20:13500628-13500938 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 143, 75 |
| Conread position: | 49-381 |
| Cow position: | chr20:35019249-35019586 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 18, 28 |
| Conread position: | 52-427 |
| Cow position: | chr20:6475863-6476241 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 140, 82 |
| Conread position: | 62-427 |
| Cow position: | chr20:31747633-31747993 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 130, 62 |
| Conread position: | 65-447 |
| Cow position: | chr20:12568971-12568580 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 222 |
| Conread position: | 70-424 |
| Cow position: | chr20:35844965-35844605 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 25 |
| Conread position: | 71-382 |
| Cow position: | chr20:13723621-13723313 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 52, 85 |
| Conread position: | 74-331 |
| Cow position: | chr20:33598782-33599045 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 50, 229 |
| Conread position: | 74-436 |
| Cow position: | chr20:8350984-8350619 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 50, 216 |
| Conread position: | 74-760 |
| Cow position: | chr20:18355579-18356259 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 393 |
| Conread position: | 75-760 |
| Cow position: | chr20:19844144-19844806 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 454 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 114, 49 |
| Conread position: | 81-451 |
| Cow position: | chr20:37582443-37582813 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 270 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 35, 82 |
| Conread position: | 88-434 |
| Cow position: | chr20:33182313-33181967 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 63, 71 |
| Conread position: | 98-459 |
| Cow position: | chr20:28724143-28724499 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 235 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 91, 134 |
| Conread position: | 109-444 |
| Cow position: | chr20:39233618-39233960 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 10 |
| Conread position: | 113-760 |
| Cow position: | chr20:6136599-6135961 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 172 |
| Conread position: | 113-775 |
| Cow position: | chr20:16560152-16559499 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 352 |
| Conread position: | 115-402 |
| Cow position: | chr20:18969119-18969411 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 17, 48 |
| Conread position: | 115-440 |
| Cow position: | chr20:30461656-30461331 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 230 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 77, 186 |
| Conread position: | 115-480 |
| Cow position: | chr20:29053743-29054103 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 111, 17 |
| Conread position: | 120-435 |
| Cow position: | chr20:29313216-29313542 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 69, 201 |
| Conread position: | 120-760 |
| Cow position: | chr20:16105831-16106476 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 30 |
| Conread position: | 122-447 |
| Cow position: | chr20:13954056-13954380 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 71, 36 |
| Conread position: | 125-381 |
| Cow position: | chr20:32086276-32086025 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 5, 74 |
| Conread position: | 135-480 |
| Cow position: | chr20:19365905-19365555 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 62, 57 |
| Conread position: | 140-736 |
| Cow position: | chr20:4736899-4736327 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 191 |
| Conread position: | 143-443 |
| Cow position: | chr20:37928339-37928052 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 146-396 |
| Cow position: | chr20:14738595-14738351 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 46, 99 |
| Conread position: | 150-446 |
| Cow position: | chr20:13645921-13645622 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 42, 12 |
| Conread position: | 151-680 |
| Cow position: | chr20:12693468-12693984 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 346 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 48, 220 |
| Conread position: | 158-364 |
| Cow position: | chr20:25269780-25269573 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 7 |
| Conread position: | 158-476 |
| Cow position: | chr20:7594145-7593823 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 10, 169 |
| Conread position: | 159-346 |
| Cow position: | chr20:808917-808725 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 33, 184 |
| Conread position: | 170-746 |
| Cow position: | chr20:24568823-24568255 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 286 |
| Conread position: | 172-401 |
| Cow position: | chr20:9995748-9995981 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 117 |
| Conread position: | 174-435 |
| Cow position: | chr20:13794584-13794846 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 18, 54 |
| Conread position: | 174-759 |
| Cow position: | chr20:3809319-3808742 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 280 |
| Conread position: | 192-435 |
| Cow position: | chr20:12686105-12685863 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 138 |
| Conread position: | 197-419 |
| Cow position: | chr20:10493691-10493911 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 191, 24 |
| Conread position: | 198-426 |
| Cow position: | chr20:27443524-27443289 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 222-444 |
| Cow position: | chr20:8200722-8200945 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 167, 0 |
| Conread position: | 222-447 |
| Cow position: | chr20:14757750-14757525 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 180, 199 |
| Conread position: | 222-455 |
| Cow position: | chr20:2020764-2020535 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 221, 34 |
| Conread position: | 222-740 |
| Cow position: | chr20:36419209-36418710 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 332 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 166, 59 |
| Conread position: | 222-760 |
| Cow position: | chr20:7811323-7810812 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 346 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 345, 92 |
| Conread position: | 225-382 |
| Cow position: | chr20:11902695-11902539 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 227-760 |
| Cow position: | chr20:38956648-38957166 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 209 |
| Conread position: | 228-444 |
| Cow position: | chr20:2180240-2180024 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 161, 192 |
| Conread position: | 233-387 |
| Cow position: | chr20:38748073-38747919 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 256-760 |
| Cow position: | chr20:13507019-13506530 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 331 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 133, 193 |
| Conread position: | 259-760 |
| Cow position: | chr20:35108645-35108159 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 329 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 130, 199 |
| Conread position: | 266-390 |
| Cow position: | chr20:3450578-3450702 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 373-678 |
| Cow position: | chr20:801926-801624 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 11, 39 |
| Conread position: | 485-1142 |
| Cow position: | chr20:21677196-21677867 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 446 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 39, 6 |
| Conread position: | 495-738 |
| Cow position: | chr20:5936251-5936002 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 34, 93 |
| Conread position: | 526-1206 |
| Cow position: | chr20:2017012-2016293 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 467 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 42, 66 |
| Conread position: | 526-1224 |
| Cow position: | chr20:924717-923982 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 145 |
| Conread position: | 537-760 |
| Cow position: | chr20:16189943-16189713 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 16, 134 |
| Conread position: | 537-760 |
| Cow position: | chr20:19306587-19306357 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 16, 134 |
| Conread position: | 537-760 |
| Cow position: | chr20:33598166-33597936 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 16, 134 |
| Conread position: | 554-783 |
| Cow position: | chr20:5086521-5086285 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 116 |
| Conread position: | 556-816 |
| Cow position: | chr20:3134518-3134793 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 11, 177 |
| Conread position: | 884-1169 |
| Cow position: | chr20:7875701-7875409 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 49, 196 |
| Conread position: | 888-1223 |
| Cow position: | chr20:5201234-5200891 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 68, 127 |
| Conread position: | 893-1224 |
| Cow position: | chr20:22446540-22446195 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 54, 229 |
| Conread position: | 915-1168 |
| Cow position: | chr20:4243243-4243496 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 62 |
| Conread position: | 916-1139 |
| Cow position: | chr20:12791179-12791408 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 6, 201 |
| Conread position: | 917-1224 |
| Cow position: | chr20:6831844-6831522 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 28, 186 |
Show alignments to all cow chromosomes.