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Cow genome map

           
Conread name:
           
Ss1.1-rpliv0129_b1.5.5
        

               
Conread position:
               
2-264
               

               
Cow position:
               
chr24:29178440-29178177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 238
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr24:6472389-6472665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 123
               

               
Conread position:
               
2-362
               

               
Cow position:
               
chr24:18867643-18867285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
32, 143
               

               
Conread position:
               
2-373
               

               
Cow position:
               
chr24:16473277-16473641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
25, 83
               

               
Conread position:
               
2-435
               

               
Cow position:
               
chr24:14722747-14723180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 115
               

               
Conread position:
               
2-478
               

               
Cow position:
               
chr24:6463280-6463754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 38
               

               
Conread position:
               
2-483
               

               
Cow position:
               
chr24:31085399-31085871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
2-487
               

               
Cow position:
               
chr24:34601636-34602137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
2-738
               

               
Cow position:
               
chr24:39056426-39055676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
770
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 111
               

               
Conread position:
               
2-1140
               

               
Cow position:
               
chr24:16208714-16207584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1200
               

               
Alignm identity:
               
786
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 164
               

               
Conread position:
               
3-382
               

               
Cow position:
               
chr24:19704002-19704387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
24, 316
               

               
Conread position:
               
3-421
               

               
Cow position:
               
chr24:1494746-1495169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chr24:24801712-24801257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 138
               

               
Conread position:
               
4-225
               

               
Cow position:
               
chr24:6345179-6345396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
29, 48
               

               
Conread position:
               
6-424
               

               
Cow position:
               
chr24:19642229-19642651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 12
               

               
Conread position:
               
8-466
               

               
Cow position:
               
chr24:16907651-16908104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
19, 83
               

               
Conread position:
               
9-739
               

               
Cow position:
               
chr24:13190479-13191197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 386
               

               
Conread position:
               
12-359
               

               
Cow position:
               
chr24:6667460-6667099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
15, 6
               

               
Conread position:
               
12-425
               

               
Cow position:
               
chr24:2711738-2712152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 164
               

               
Conread position:
               
12-438
               

               
Cow position:
               
chr24:29154681-29155102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
21, 6
               

               
Conread position:
               
12-444
               

               
Cow position:
               
chr24:12910907-12911334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
21, 6
               

               
Conread position:
               
12-446
               

               
Cow position:
               
chr24:22818156-22818604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
177, 96
               

               
Conread position:
               
12-447
               

               
Cow position:
               
chr24:12570216-12570666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
34, 42
               

               
Conread position:
               
12-447
               

               
Cow position:
               
chr24:14317227-14316785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
107, 6
               

               
Conread position:
               
12-482
               

               
Cow position:
               
chr24:29350991-29350526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 103
               

               
Conread position:
               
13-187
               

               
Cow position:
               
chr24:9072871-9072694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
13-304
               

               
Cow position:
               
chr24:16857207-16857505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
18, 94
               

               
Conread position:
               
13-436
               

               
Cow position:
               
chr24:36557255-36556835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
14, 104
               

               
Conread position:
               
13-444
               

               
Cow position:
               
chr24:6078751-6079182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 204
               

               
Conread position:
               
13-447
               

               
Cow position:
               
chr24:14759194-14759636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 58
               

               
Conread position:
               
13-454
               

               
Cow position:
               
chr24:16326229-16325798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
21, 122
               

               
Conread position:
               
13-479
               

               
Cow position:
               
chr24:41230925-41231388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 153
               

               
Conread position:
               
13-479
               

               
Cow position:
               
chr24:42587324-42587787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 183
               

               
Conread position:
               
13-487
               

               
Cow position:
               
chr24:43935779-43936259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
180, 24
               

               
Conread position:
               
13-760
               

               
Cow position:
               
chr24:6411790-6412529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
766
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 303
               

               
Conread position:
               
13-760
               

               
Cow position:
               
chr24:33936231-33936980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
769
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 121
               

               
Conread position:
               
13-760
               

               
Cow position:
               
chr24:40468094-40467365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
768
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 152
               

               
Conread position:
               
15-238
               

               
Cow position:
               
chr24:6461028-6461252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
15-478
               

               
Cow position:
               
chr24:14766813-14767270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
6, 68
               

               
Conread position:
               
19-441
               

               
Cow position:
               
chr24:14335189-14335602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
170, 7
               

               
Conread position:
               
20-235
               

               
Cow position:
               
chr24:6678363-6678583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
169, 145
               

               
Conread position:
               
22-298
               

               
Cow position:
               
chr24:17367600-17367322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
5, 75
               

               
Conread position:
               
24-455
               

               
Cow position:
               
chr24:12126770-12126329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
9, 52
               

               
Conread position:
               
25-235
               

               
Cow position:
               
chr24:14306545-14306753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
85, 168
               

               
Conread position:
               
25-306
               

               
Cow position:
               
chr24:14174408-14174129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
99, 141
               

               
Conread position:
               
25-357
               

               
Cow position:
               
chr24:22322041-22322381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
9, 250
               

               
Conread position:
               
25-463
               

               
Cow position:
               
chr24:36479584-36479124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 345
               

               
Conread position:
               
25-479
               

               
Cow position:
               
chr24:37198702-37198238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 147
               

               
Conread position:
               
25-760
               

               
Cow position:
               
chr24:14195535-14194797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
766
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 126
               

               
Conread position:
               
26-187
               

               
Cow position:
               
chr24:17454806-17454643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
26-187
               

               
Cow position:
               
chr24:36132486-36132649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
26-273
               

               
Cow position:
               
chr24:36037887-36037634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 46
               

               
Conread position:
               
26-276
               

               
Cow position:
               
chr24:1454106-1454357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
166, 86
               

               
Conread position:
               
26-283
               

               
Cow position:
               
chr24:22973396-22973659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
95, 119
               

               
Conread position:
               
26-334
               

               
Cow position:
               
chr24:19835732-19836049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
35, 42
               

               
Conread position:
               
26-337
               

               
Cow position:
               
chr24:11150797-11150480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
84, 126
               

               
Conread position:
               
26-338
               

               
Cow position:
               
chr24:6272292-6271982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
89, 134
               

               
Conread position:
               
26-378
               

               
Cow position:
               
chr24:14377331-14376971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
89, 126
               

               
Conread position:
               
26-381
               

               
Cow position:
               
chr24:6657928-6657569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 141
               

               
Conread position:
               
26-397
               

               
Cow position:
               
chr24:25438620-25438983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
43, 126
               

               
Conread position:
               
26-410
               

               
Cow position:
               
chr24:38004617-38004222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 169
               

               
Conread position:
               
26-419
               

               
Cow position:
               
chr24:9177640-9177245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
154, 98
               

               
Conread position:
               
26-427
               

               
Cow position:
               
chr24:42583443-42583037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
61, 97
               

               
Conread position:
               
26-435
               

               
Cow position:
               
chr24:16647604-16647161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
26-443
               

               
Cow position:
               
chr24:38640468-38640886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 99
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr24:6069534-6069099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
97, 380
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr24:12088528-12088948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
87, 125
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr24:20285019-20284594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 313
               

               
Conread position:
               
26-446
               

               
Cow position:
               
chr24:6164779-6164368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
166, 98
               

               
Conread position:
               
26-446
               

               
Cow position:
               
chr24:18268159-18267734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 41
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr24:12239196-12239612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 128
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr24:19884618-19885049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 42
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr24:35868309-35867915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
296, 28
               

               
Conread position:
               
26-479
               

               
Cow position:
               
chr24:12148775-12148314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 73
               

               
Conread position:
               
26-479
               

               
Cow position:
               
chr24:12698693-12698227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 334
               

               
Conread position:
               
26-480
               

               
Cow position:
               
chr24:14739982-14740436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 82
               

               
Conread position:
               
26-480
               

               
Cow position:
               
chr24:36724389-36724853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 332
               

               
Conread position:
               
26-722
               

               
Cow position:
               
chr24:12333397-12332696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
26-757
               

               
Cow position:
               
chr24:6021751-6021030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 124
               

               
Conread position:
               
26-758
               

               
Cow position:
               
chr24:6440077-6440802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 358
               

               
Conread position:
               
26-758
               

               
Cow position:
               
chr24:21248623-21247897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 441
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr24:208676-207953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 20
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr24:3849892-3850646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
759
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 435
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr24:6327041-6326320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 126
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr24:7063891-7064617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 73
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr24:8606671-8607380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 165
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr24:13234564-13235283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 381
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr24:16082163-16081435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 114
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr24:17323017-17323748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 369
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr24:20366690-20367418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 352
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr24:29189611-29190340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 432
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr24:40550951-40551676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 126
               

               
Conread position:
               
27-210
               

               
Cow position:
               
chr24:4413225-4413046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
8, 97
               

               
Conread position:
               
27-400
               

               
Cow position:
               
chr24:12204037-12203661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
7, 76
               

               
Conread position:
               
27-421
               

               
Cow position:
               
chr24:14880560-14880162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
27-760
               

               
Cow position:
               
chr24:16559978-16559228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
759
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 131
               

               
Conread position:
               
27-760
               

               
Cow position:
               
chr24:19689252-19688528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 125
               

               
Conread position:
               
29-276
               

               
Cow position:
               
chr24:28687794-28688040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
95, 204
               

               
Conread position:
               
29-760
               

               
Cow position:
               
chr24:41004818-41005530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
97, 122
               

               
Conread position:
               
30-384
               

               
Cow position:
               
chr24:14350328-14350690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
30-399
               

               
Cow position:
               
chr24:11691668-11691292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 122
               

               
Conread position:
               
31-418
               

               
Cow position:
               
chr24:39679864-39680243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
158, 75
               

               
Conread position:
               
33-371
               

               
Cow position:
               
chr24:18711693-18712033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 162
               

               
Conread position:
               
33-444
               

               
Cow position:
               
chr24:11570830-11570412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
115, 18
               

               
Conread position:
               
36-444
               

               
Cow position:
               
chr24:31183570-31183980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
156, 66
               

               
Conread position:
               
40-447
               

               
Cow position:
               
chr24:19468248-19467831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
149, 80
               

               
Conread position:
               
50-451
               

               
Cow position:
               
chr24:23847307-23847697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
67, 88
               

               
Conread position:
               
54-350
               

               
Cow position:
               
chr24:38584790-38584489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
63, 41
               

               
Conread position:
               
71-479
               

               
Cow position:
               
chr24:13323220-13323636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
122, 44
               

               
Conread position:
               
71-682
               

               
Cow position:
               
chr24:14263948-14264550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
75-377
               

               
Cow position:
               
chr24:6338746-6339052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 77
               

               
Conread position:
               
75-435
               

               
Cow position:
               
chr24:146220-145851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
75-447
               

               
Cow position:
               
chr24:23093670-23093289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
49, 255
               

               
Conread position:
               
75-447
               

               
Cow position:
               
chr24:23096408-23096027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
49, 255
               

               
Conread position:
               
81-426
               

               
Cow position:
               
chr24:35994565-35994909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
134, 32
               

               
Conread position:
               
96-389
               

               
Cow position:
               
chr24:1247922-1248217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 70
               

               
Conread position:
               
98-408
               

               
Cow position:
               
chr24:19674107-19674411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
91, 6
               

               
Conread position:
               
99-480
               

               
Cow position:
               
chr24:25009877-25009492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
100-434
               

               
Cow position:
               
chr24:6509676-6509345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
21, 163
               

               
Conread position:
               
100-457
               

               
Cow position:
               
chr24:41535716-41535367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
31, 72
               

               
Conread position:
               
112-401
               

               
Cow position:
               
chr24:11226730-11227005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
113-426
               

               
Cow position:
               
chr24:32362708-32362385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
113-479
               

               
Cow position:
               
chr24:17410852-17411216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
79, 41
               

               
Conread position:
               
113-757
               

               
Cow position:
               
chr24:12208200-12208829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
76, 28
               

               
Conread position:
               
114-463
               

               
Cow position:
               
chr24:6503810-6503477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
8, 31
               

               
Conread position:
               
115-357
               

               
Cow position:
               
chr24:31049202-31049451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
115-407
               

               
Cow position:
               
chr24:36712682-36712966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
279, 34
               

               
Conread position:
               
117-426
               

               
Cow position:
               
chr24:28927382-28927085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 33
               

               
Conread position:
               
120-760
               

               
Cow position:
               
chr24:6963269-6963901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 345
               

               
Conread position:
               
121-447
               

               
Cow position:
               
chr24:31380842-31381172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
71, 29
               

               
Conread position:
               
121-479
               

               
Cow position:
               
chr24:15934332-15934688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
79, 14
               

               
Conread position:
               
123-479
               

               
Cow position:
               
chr24:27586204-27586559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
69, 48
               

               
Conread position:
               
124-507
               

               
Cow position:
               
chr24:17997725-17998106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
65, 182
               

               
Conread position:
               
125-348
               

               
Cow position:
               
chr24:20387742-20387979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
129-342
               

               
Cow position:
               
chr24:33321462-33321236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
146-426
               

               
Cow position:
               
chr24:17031627-17031352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
47, 181
               

               
Conread position:
               
149-366
               

               
Cow position:
               
chr24:32419605-32419382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
150-711
               

               
Cow position:
               
chr24:25371385-25371936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 315
               

               
Conread position:
               
151-344
               

               
Cow position:
               
chr24:31766463-31766650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
152-447
               

               
Cow position:
               
chr24:12466696-12466993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
164-340
               

               
Cow position:
               
chr24:41865178-41864996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
170-479
               

               
Cow position:
               
chr24:40460915-40460607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
183-427
               

               
Cow position:
               
chr24:39531226-39530982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
9, 53
               

               
Conread position:
               
183-435
               

               
Cow position:
               
chr24:16604294-16604034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
40, 198
               

               
Conread position:
               
191-475
               

               
Cow position:
               
chr24:32848658-32848941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
32, 92
               

               
Conread position:
               
191-479
               

               
Cow position:
               
chr24:30895320-30895610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
29, 255
               

               
Conread position:
               
198-458
               

               
Cow position:
               
chr24:14785853-14786091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
222-384
               

               
Cow position:
               
chr24:29085343-29085183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
222-425
               

               
Cow position:
               
chr24:1950019-1950223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
222-444
               

               
Cow position:
               
chr24:15295355-15295578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
222-444
               

               
Cow position:
               
chr24:33986003-33986226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
222-480
               

               
Cow position:
               
chr24:14306775-14307036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
93, 10
               

               
Conread position:
               
222-760
               

               
Cow position:
               
chr24:34373120-34373643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 236
               

               
Conread position:
               
225-458
               

               
Cow position:
               
chr24:13085933-13085706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
90, 48
               

               
Conread position:
               
227-382
               

               
Cow position:
               
chr24:12578067-12578222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
89, 82
               

               
Conread position:
               
227-479
               

               
Cow position:
               
chr24:26794427-26794186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
205, 103
               

               
Conread position:
               
228-479
               

               
Cow position:
               
chr24:5775581-5775329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
160, 7
               

               
Conread position:
               
239-425
               

               
Cow position:
               
chr24:27960303-27960116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
248-444
               

               
Cow position:
               
chr24:43906008-43906205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
309-480
               

               
Cow position:
               
chr24:25060367-25060194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
79, 20
               

               
Conread position:
               
311-818
               

               
Cow position:
               
chr24:840731-841255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
72, 50
               

               
Conread position:
               
484-1037
               

               
Cow position:
               
chr24:6463732-6464321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
525-1223
               

               
Cow position:
               
chr24:6503439-6502734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
42, 125
               

               
Conread position:
               
526-1133
               

               
Cow position:
               
chr24:37222977-37222359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 103
               

               
Conread position:
               
527-738
               

               
Cow position:
               
chr24:27959890-27959677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 144
               

               
Conread position:
               
534-687
               

               
Cow position:
               
chr24:32418296-32418143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 52
               

               
Conread position:
               
537-760
               

               
Cow position:
               
chr24:29084844-29084614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
16, 134
               

               
Conread position:
               
537-760
               

               
Cow position:
               
chr24:31842361-31842591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
16, 134
               

               
Conread position:
               
537-783
               

               
Cow position:
               
chr24:9545993-9546247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 231
               

               
Conread position:
               
551-1204
               

               
Cow position:
               
chr24:23805861-23806528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
17, 39
               

               
Conread position:
               
774-1170
               

               
Cow position:
               
chr24:7467210-7466814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
44, 87
               

               
Conread position:
               
884-1170
               

               
Cow position:
               
chr24:19903065-19902777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
44, 209
               

               
Conread position:
               
884-1222
               

               
Cow position:
               
chr24:39055493-39055158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
86, 171
               

               
Conread position:
               
884-1224
               

               
Cow position:
               
chr24:14699392-14699052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
93, 69
               

               
Conread position:
               
884-1224
               

               
Cow position:
               
chr24:33187813-33188149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
888-1224
               

               
Cow position:
               
chr24:1294971-1294622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
60, 111
               

               
Conread position:
               
891-1170
               

               
Cow position:
               
chr24:21887845-21888128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
14, 20
               

               
Conread position:
               
907-1224
               

               
Cow position:
               
chr24:39829513-39829194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 90
               

               
Conread position:
               
908-1222
               

               
Cow position:
               
chr24:36563057-36562741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
78, 162
               

               
Conread position:
               
910-1169
               

               
Cow position:
               
chr24:29395125-29394862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
57, 43
               

               
Conread position:
               
952-1222
               

               
Cow position:
               
chr24:16874952-16874680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
120, 61
               

               
Conread position:
               
974-1224
               

               
Cow position:
               
chr24:23491424-23491678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
97, 91
               
Show alignments to all cow chromosomes.