Cow genome map
| Conread name: | Ss1.1-rpliv0129_b1.5.5 |
| Conread position: | 1-321 |
| Cow position: | chr25:18250660-18250324 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 32, 156 |
| Conread position: | 2-291 |
| Cow position: | chr25:30313203-30312902 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 29, 49 |
| Conread position: | 2-294 |
| Cow position: | chr25:26733222-26733525 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 119, 273 |
| Conread position: | 2-386 |
| Cow position: | chr25:5265777-5265403 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 265 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 33, 10 |
| Conread position: | 2-389 |
| Cow position: | chr25:21415964-21415571 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 271 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 34, 123 |
| Conread position: | 2-399 |
| Cow position: | chr25:20099637-20100042 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 279 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 31, 270 |
| Conread position: | 2-400 |
| Cow position: | chr25:18280565-18280162 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 271 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 31, 94 |
| Conread position: | 2-455 |
| Cow position: | chr25:15283230-15283695 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 173 |
| Conread position: | 2-479 |
| Cow position: | chr25:33261469-33261943 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 319 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 26, 37 |
| Conread position: | 2-480 |
| Cow position: | chr25:30129525-30129035 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 327 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 19, 75 |
| Conread position: | 2-481 |
| Cow position: | chr25:34495134-34494661 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 17 |
| Conread position: | 2-738 |
| Cow position: | chr25:13793218-13792491 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 259 |
| Conread position: | 2-750 |
| Cow position: | chr25:25289217-25289962 (view UCSC Genome Browser custom track) |
| Alignm length: | 771 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 168 |
| Conread position: | 3-216 |
| Cow position: | chr25:30154499-30154289 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 187, 30 |
| Conread position: | 3-335 |
| Cow position: | chr25:12699976-12700311 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 31, 144 |
| Conread position: | 3-435 |
| Cow position: | chr25:14010873-14011315 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 81 |
| Conread position: | 3-447 |
| Cow position: | chr25:34344704-34344253 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 138 |
| Conread position: | 3-760 |
| Cow position: | chr25:18191387-18190622 (view UCSC Genome Browser custom track) |
| Alignm length: | 785 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 149 |
| Conread position: | 5-213 |
| Cow position: | chr25:18451992-18452203 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 5-440 |
| Cow position: | chr25:10135711-10136143 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 7 |
| Conread position: | 6-428 |
| Cow position: | chr25:41308860-41308451 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 27, 19 |
| Conread position: | 8-327 |
| Cow position: | chr25:24215250-24214926 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 89 |
| Conread position: | 10-480 |
| Cow position: | chr25:18422733-18423206 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 14 |
| Conread position: | 12-204 |
| Cow position: | chr25:14559226-14559032 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 12-250 |
| Cow position: | chr25:25508982-25509220 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 19, 6 |
| Conread position: | 12-393 |
| Cow position: | chr25:24206400-24206018 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 105, 167 |
| Conread position: | 12-399 |
| Cow position: | chr25:26455725-26456101 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 275 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 180, 47 |
| Conread position: | 12-421 |
| Cow position: | chr25:18489029-18489449 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 277 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 21, 6 |
| Conread position: | 12-447 |
| Cow position: | chr25:16924119-16923682 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 14 |
| Conread position: | 12-479 |
| Cow position: | chr25:30809850-30810295 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 317 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 213, 6 |
| Conread position: | 12-480 |
| Cow position: | chr25:10635257-10634777 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 54 |
| Conread position: | 12-513 |
| Cow position: | chr25:12835549-12835047 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 6 |
| Conread position: | 12-736 |
| Cow position: | chr25:11930506-11929815 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 469 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 375, 95 |
| Conread position: | 13-246 |
| Cow position: | chr25:30663717-30663483 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 16, 39 |
| Conread position: | 13-336 |
| Cow position: | chr25:40431290-40430972 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 113, 54 |
| Conread position: | 13-384 |
| Cow position: | chr25:13784861-13785241 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 13-424 |
| Cow position: | chr25:170388-169976 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 297 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 22, 59 |
| Conread position: | 13-435 |
| Cow position: | chr25:38398463-38398894 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 152 |
| Conread position: | 13-447 |
| Cow position: | chr25:24656425-24655984 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 383 |
| Conread position: | 13-645 |
| Cow position: | chr25:49218-49828 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 34 |
| Conread position: | 13-760 |
| Cow position: | chr25:11042633-11043371 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 13 |
| Conread position: | 15-424 |
| Cow position: | chr25:1077846-1078256 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 86 |
| Conread position: | 15-635 |
| Cow position: | chr25:32448162-32448777 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 85 |
| Conread position: | 16-228 |
| Cow position: | chr25:18426307-18426519 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 22, 124 |
| Conread position: | 18-399 |
| Cow position: | chr25:11828696-11828321 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 104 |
| Conread position: | 24-783 |
| Cow position: | chr25:32578639-32577890 (view UCSC Genome Browser custom track) |
| Alignm length: | 779 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 434 |
| Conread position: | 25-207 |
| Cow position: | chr25:9394227-9394419 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 25-220 |
| Cow position: | chr25:17547764-17547569 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 122 |
| Conread position: | 25-281 |
| Cow position: | chr25:12173096-12172831 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 8, 127 |
| Conread position: | 25-399 |
| Cow position: | chr25:16448403-16448041 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 250 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 164, 99 |
| Conread position: | 25-675 |
| Cow position: | chr25:14537640-14537003 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 31 |
| Conread position: | 26-186 |
| Cow position: | chr25:21948865-21948708 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 26-228 |
| Cow position: | chr25:23999791-23999587 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 98, 163 |
| Conread position: | 26-229 |
| Cow position: | chr25:26354626-26354832 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 26-291 |
| Cow position: | chr25:34673939-34674210 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 163, 94 |
| Conread position: | 26-305 |
| Cow position: | chr25:13771248-13770958 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 82, 36 |
| Conread position: | 26-310 |
| Cow position: | chr25:3925960-3926242 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 10, 89 |
| Conread position: | 26-334 |
| Cow position: | chr25:19409335-19409650 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 96, 119 |
| Conread position: | 26-353 |
| Cow position: | chr25:29359054-29359387 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 126 |
| Conread position: | 26-361 |
| Cow position: | chr25:34505791-34505447 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 98, 138 |
| Conread position: | 26-367 |
| Cow position: | chr25:13351991-13352342 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 26-371 |
| Cow position: | chr25:18324551-18324213 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 235 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 109, 15 |
| Conread position: | 26-383 |
| Cow position: | chr25:27020304-27019946 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 24 |
| Conread position: | 26-384 |
| Cow position: | chr25:26929885-26930258 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 257 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 91, 268 |
| Conread position: | 26-399 |
| Cow position: | chr25:34510721-34510342 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 127 |
| Conread position: | 26-402 |
| Cow position: | chr25:20631917-20632300 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 125 |
| Conread position: | 26-419 |
| Cow position: | chr25:15366189-15366571 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 104, 56 |
| Conread position: | 26-426 |
| Cow position: | chr25:14768165-14767746 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 114, 97 |
| Conread position: | 26-427 |
| Cow position: | chr25:11664694-11665105 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 57 |
| Conread position: | 26-435 |
| Cow position: | chr25:13959102-13959511 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 97 |
| Conread position: | 26-444 |
| Cow position: | chr25:35552712-35553140 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 26-444 |
| Cow position: | chr25:37647456-37647884 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 128 |
| Conread position: | 26-447 |
| Cow position: | chr25:19922840-19923268 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 182 |
| Conread position: | 26-447 |
| Cow position: | chr25:26900561-26900986 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 289 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 98, 124 |
| Conread position: | 26-477 |
| Cow position: | chr25:21546237-21546682 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 24 |
| Conread position: | 26-680 |
| Cow position: | chr25:20773310-20772667 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 432 |
| Conread position: | 26-746 |
| Cow position: | chr25:18887450-18886733 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 435 |
| Conread position: | 26-757 |
| Cow position: | chr25:29803754-29803000 (view UCSC Genome Browser custom track) |
| Alignm length: | 762 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 47 |
| Conread position: | 26-760 |
| Cow position: | chr25:19338293-19337573 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 183 |
| Conread position: | 26-760 |
| Cow position: | chr25:26281047-26281773 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 120 |
| Conread position: | 26-760 |
| Cow position: | chr25:35562484-35561749 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 135 |
| Conread position: | 27-229 |
| Cow position: | chr25:12940148-12939946 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 94, 118 |
| Conread position: | 27-379 |
| Cow position: | chr25:23846785-23846437 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 28 |
| Conread position: | 28-454 |
| Cow position: | chr25:38144620-38145052 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 284 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 16, 304 |
| Conread position: | 30-757 |
| Cow position: | chr25:28861904-28862616 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 116 |
| Conread position: | 31-234 |
| Cow position: | chr25:21966274-21966478 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 90, 139 |
| Conread position: | 32-381 |
| Cow position: | chr25:41106474-41106835 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 94, 22 |
| Conread position: | 32-447 |
| Cow position: | chr25:17656689-17657097 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 14 |
| Conread position: | 33-400 |
| Cow position: | chr25:23774170-23773807 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 261 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 89, 277 |
| Conread position: | 33-426 |
| Cow position: | chr25:34667694-34667301 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 181 |
| Conread position: | 36-317 |
| Cow position: | chr25:33837454-33837743 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 81, 283 |
| Conread position: | 37-269 |
| Cow position: | chr25:11658437-11658678 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 38-187 |
| Cow position: | chr25:15617064-15617215 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 46-480 |
| Cow position: | chr25:34671342-34670910 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 15 |
| Conread position: | 60-479 |
| Cow position: | chr25:19017329-19016909 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 79 |
| Conread position: | 62-444 |
| Cow position: | chr25:17555404-17555020 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 148, 50 |
| Conread position: | 71-434 |
| Cow position: | chr25:23360254-23360626 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 46, 198 |
| Conread position: | 76-760 |
| Cow position: | chr25:18179080-18179770 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 404 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 144, 69 |
| Conread position: | 77-435 |
| Cow position: | chr25:14962831-14962496 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 46, 112 |
| Conread position: | 86-715 |
| Cow position: | chr25:38634450-38635063 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 417 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 106, 25 |
| Conread position: | 104-447 |
| Cow position: | chr25:41099070-41098731 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 88, 20 |
| Conread position: | 113-348 |
| Cow position: | chr25:22189547-22189786 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 19, 109 |
| Conread position: | 113-447 |
| Cow position: | chr25:17586902-17586566 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 79, 37 |
| Conread position: | 115-444 |
| Cow position: | chr25:19106603-19106936 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 77, 41 |
| Conread position: | 129-703 |
| Cow position: | chr25:35086164-35085601 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 392 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 68, 36 |
| Conread position: | 132-415 |
| Cow position: | chr25:24732651-24732365 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 193 |
| Conread position: | 146-436 |
| Cow position: | chr25:32566049-32566337 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 17, 69 |
| Conread position: | 146-444 |
| Cow position: | chr25:35648836-35648530 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 148-681 |
| Cow position: | chr25:31513144-31513654 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 354 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 44, 188 |
| Conread position: | 151-447 |
| Cow position: | chr25:22150225-22150527 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 41, 156 |
| Conread position: | 179-360 |
| Cow position: | chr25:37232505-37232326 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 125 |
| Conread position: | 185-444 |
| Cow position: | chr25:32898350-32898610 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 7, 75 |
| Conread position: | 198-341 |
| Cow position: | chr25:1470118-1469969 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 23, 121 |
| Conread position: | 199-485 |
| Cow position: | chr25:28261435-28261703 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 247, 11 |
| Conread position: | 222-400 |
| Cow position: | chr25:17547262-17547092 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 158, 23 |
| Conread position: | 222-444 |
| Cow position: | chr25:9984331-9984548 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 190, 105 |
| Conread position: | 222-444 |
| Cow position: | chr25:14626216-14625994 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 66, 171 |
| Conread position: | 222-447 |
| Cow position: | chr25:35568655-35568430 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 167, 20 |
| Conread position: | 222-447 |
| Cow position: | chr25:35756017-35755790 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 222-479 |
| Cow position: | chr25:18209469-18209210 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 166, 65 |
| Conread position: | 222-691 |
| Cow position: | chr25:9645994-9646482 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 321 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 40, 415 |
| Conread position: | 232-476 |
| Cow position: | chr25:21652200-21651966 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 94, 24 |
| Conread position: | 234-446 |
| Cow position: | chr25:24449991-24449778 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 154, 9 |
| Conread position: | 282-446 |
| Cow position: | chr25:570344-570177 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 32, 43 |
| Conread position: | 386-1170 |
| Cow position: | chr25:30113130-30112328 (view UCSC Genome Browser custom track) |
| Alignm length: | 835 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 174 |
| Conread position: | 500-759 |
| Cow position: | chr25:24732321-24732054 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 29, 98 |
| Conread position: | 501-746 |
| Cow position: | chr25:1025968-1025716 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 34, 113 |
| Conread position: | 512-950 |
| Cow position: | chr25:28169461-28169024 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 286 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 56, 23 |
| Conread position: | 526-740 |
| Cow position: | chr25:19016890-19016675 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 149 |
| Conread position: | 530-1011 |
| Cow position: | chr25:19327146-19327663 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 330 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 531-746 |
| Cow position: | chr25:14011353-14011569 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 537-760 |
| Cow position: | chr25:24007426-24007656 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 16, 134 |
| Conread position: | 543-818 |
| Cow position: | chr25:21302111-21302397 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 115 |
| Conread position: | 551-783 |
| Cow position: | chr25:22197853-22197614 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 17, 216 |
| Conread position: | 884-1135 |
| Cow position: | chr25:21566450-21566198 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 26 |
| Conread position: | 884-1157 |
| Cow position: | chr25:32449132-32449416 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 61, 235 |
| Conread position: | 884-1167 |
| Cow position: | chr25:33065717-33066002 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 27 |
| Conread position: | 886-1159 |
| Cow position: | chr25:24799650-24799923 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 79, 119 |
| Conread position: | 887-1170 |
| Cow position: | chr25:12216034-12215739 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 18, 127 |
| Conread position: | 888-1170 |
| Cow position: | chr25:16522979-16523267 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 54, 171 |
| Conread position: | 888-1224 |
| Cow position: | chr25:10737805-10737463 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 888-1224 |
| Cow position: | chr25:24731902-24731552 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 54, 113 |
| Conread position: | 890-1224 |
| Cow position: | chr25:14011746-14012099 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 9, 230 |
| Conread position: | 912-1224 |
| Cow position: | chr25:30163234-30162908 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 227 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 28, 87 |
| Conread position: | 914-1158 |
| Cow position: | chr25:30444474-30444717 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 6, 74 |
| Conread position: | 927-1217 |
| Cow position: | chr25:11152140-11151840 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 112, 25 |
| Conread position: | 933-1170 |
| Cow position: | chr25:18069220-18069455 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 126, 160 |
| Conread position: | 949-1213 |
| Cow position: | chr25:15284571-15284836 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 88, 35 |
| Conread position: | 949-1222 |
| Cow position: | chr25:34494170-34493897 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 166, 53 |
| Conread position: | 949-1224 |
| Cow position: | chr25:17450706-17450429 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 92, 99 |
| Conread position: | 949-1224 |
| Cow position: | chr25:30079443-30079163 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 7, 22 |
| Conread position: | 949-1224 |
| Cow position: | chr25:34334669-34334393 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 122, 93 |
| Conread position: | 957-1218 |
| Cow position: | chr25:20369086-20369351 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 76, 112 |
| Conread position: | 957-1224 |
| Cow position: | chr25:27977843-27977569 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 29 |
| Conread position: | 970-1202 |
| Cow position: | chr25:30326366-30326133 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 90, 136 |
Show alignments to all cow chromosomes.