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Cow genome map

           
Conread name:
           
Ss1.1-rpliv0129_b1.5.5
        

               
Conread position:
               
1-399
               

               
Cow position:
               
chr3:17938855-17938452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 145
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr3:82157457-82157839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr3:37627103-37627535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 211
               

               
Conread position:
               
2-207
               

               
Cow position:
               
chr3:43418442-43418637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
28, 121
               

               
Conread position:
               
2-210
               

               
Cow position:
               
chr3:67780678-67780888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
2-291
               

               
Cow position:
               
chr3:19590569-19590273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
31, 150
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr3:49742601-49742903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
25, 290
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr3:32414090-32414392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr3:52709325-52709641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 109
               

               
Conread position:
               
2-340
               

               
Cow position:
               
chr3:73530838-73531183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
7, 84
               

               
Conread position:
               
2-361
               

               
Cow position:
               
chr3:12565216-12564844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 325
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr3:34089172-34088788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
25, 101
               

               
Conread position:
               
2-381
               

               
Cow position:
               
chr3:1705420-1705035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 53
               

               
Conread position:
               
2-381
               

               
Cow position:
               
chr3:49733708-49734093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 353
               

               
Conread position:
               
2-420
               

               
Cow position:
               
chr3:27583001-27583401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
2-424
               

               
Cow position:
               
chr3:3789777-3790202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 295
               

               
Conread position:
               
2-424
               

               
Cow position:
               
chr3:76352428-76352855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 95
               

               
Conread position:
               
2-435
               

               
Cow position:
               
chr3:1504246-1504683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
2-435
               

               
Cow position:
               
chr3:24355740-24356173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 77
               

               
Conread position:
               
2-447
               

               
Cow position:
               
chr3:19719393-19718942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
2-448
               

               
Cow position:
               
chr3:49561542-49561121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
217, 32
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr3:38253883-38254341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
31, 278
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr3:15500874-15501317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr3:58887995-58887535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 298
               

               
Conread position:
               
2-463
               

               
Cow position:
               
chr3:30002423-30002877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
30, 45
               

               
Conread position:
               
2-477
               

               
Cow position:
               
chr3:73303646-73304127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
2-479
               

               
Cow position:
               
chr3:33325257-33325751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
31, 213
               

               
Conread position:
               
2-479
               

               
Cow position:
               
chr3:63256256-63256739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 23
               

               
Conread position:
               
2-480
               

               
Cow position:
               
chr3:31320492-31320966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 97
               

               
Conread position:
               
2-736
               

               
Cow position:
               
chr3:57741670-57742384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 169
               

               
Conread position:
               
3-425
               

               
Cow position:
               
chr3:19941068-19941485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
24, 122
               

               
Conread position:
               
3-435
               

               
Cow position:
               
chr3:56328263-56328707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
3-760
               

               
Cow position:
               
chr3:30616792-30616047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
776
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 54
               

               
Conread position:
               
3-760
               

               
Cow position:
               
chr3:75039709-75038952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 458
               

               
Conread position:
               
4-414
               

               
Cow position:
               
chr3:14849430-14849832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
30, 165
               

               
Conread position:
               
5-332
               

               
Cow position:
               
chr3:76154511-76154834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 184
               

               
Conread position:
               
5-427
               

               
Cow position:
               
chr3:27211279-27211700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
30, 119
               

               
Conread position:
               
6-447
               

               
Cow position:
               
chr3:48524891-48525335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
8-193
               

               
Cow position:
               
chr3:79430602-79430415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
8-367
               

               
Cow position:
               
chr3:12752338-12752683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 88
               

               
Conread position:
               
8-372
               

               
Cow position:
               
chr3:77589066-77588709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
13, 93
               

               
Conread position:
               
8-444
               

               
Cow position:
               
chr3:24573998-24573569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
103, 11
               

               
Conread position:
               
9-381
               

               
Cow position:
               
chr3:46504715-46505092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 144
               

               
Conread position:
               
12-186
               

               
Cow position:
               
chr3:69434887-69434710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
94, 157
               

               
Conread position:
               
12-190
               

               
Cow position:
               
chr3:63200904-63201086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
21, 6
               

               
Conread position:
               
12-261
               

               
Cow position:
               
chr3:9433502-9433750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
209, 110
               

               
Conread position:
               
12-273
               

               
Cow position:
               
chr3:34040424-34040157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 6
               

               
Conread position:
               
12-279
               

               
Cow position:
               
chr3:55729198-55729471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
109, 139
               

               
Conread position:
               
12-319
               

               
Cow position:
               
chr3:75185508-75185817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
21, 95
               

               
Conread position:
               
12-332
               

               
Cow position:
               
chr3:7115401-7115713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
213, 34
               

               
Conread position:
               
12-355
               

               
Cow position:
               
chr3:52662552-52662899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
112, 144
               

               
Conread position:
               
12-373
               

               
Cow position:
               
chr3:57455156-57455521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
15, 140
               

               
Conread position:
               
12-381
               

               
Cow position:
               
chr3:3982784-3983162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
12-387
               

               
Cow position:
               
chr3:3059051-3059426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
21, 6
               

               
Conread position:
               
12-390
               

               
Cow position:
               
chr3:40102647-40102270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
177, 111
               

               
Conread position:
               
12-397
               

               
Cow position:
               
chr3:77549180-77549565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
126, 251
               

               
Conread position:
               
12-426
               

               
Cow position:
               
chr3:70889430-70889843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 50
               

               
Conread position:
               
12-438
               

               
Cow position:
               
chr3:66849031-66848610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
12-444
               

               
Cow position:
               
chr3:48602403-48602841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 6
               

               
Conread position:
               
12-455
               

               
Cow position:
               
chr3:71140462-71140017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 6
               

               
Conread position:
               
12-479
               

               
Cow position:
               
chr3:58128236-58128699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 13
               

               
Conread position:
               
12-740
               

               
Cow position:
               
chr3:3938005-3938712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
181, 112
               

               
Conread position:
               
12-767
               

               
Cow position:
               
chr3:25998993-25998236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
782
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 6
               

               
Conread position:
               
12-1224
               

               
Cow position:
               
chr3:16885137-16883919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1263
               

               
Alignm identity:
               
787
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 88
               

               
Conread position:
               
13-229
               

               
Cow position:
               
chr3:21180546-21180329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
21, 133
               

               
Conread position:
               
13-270
               

               
Cow position:
               
chr3:36862304-36862039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
111, 33
               

               
Conread position:
               
13-276
               

               
Cow position:
               
chr3:32361577-32361847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
8, 189
               

               
Conread position:
               
13-293
               

               
Cow position:
               
chr3:9001205-9000924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
13-296
               

               
Cow position:
               
chr3:24637588-24637874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
104, 13
               

               
Conread position:
               
13-373
               

               
Cow position:
               
chr3:58855405-58855768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
13-381
               

               
Cow position:
               
chr3:6687955-6688340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
8, 209
               

               
Conread position:
               
13-381
               

               
Cow position:
               
chr3:24347347-24347720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
14, 140
               

               
Conread position:
               
13-384
               

               
Cow position:
               
chr3:23205730-23205350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 347
               

               
Conread position:
               
13-389
               

               
Cow position:
               
chr3:18205507-18205145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
20, 53
               

               
Conread position:
               
13-389
               

               
Cow position:
               
chr3:40209321-40208945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 270
               

               
Conread position:
               
13-390
               

               
Cow position:
               
chr3:10034597-10034962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 209
               

               
Conread position:
               
13-399
               

               
Cow position:
               
chr3:14890160-14889767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
13-424
               

               
Cow position:
               
chr3:11510693-11510274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 161
               

               
Conread position:
               
13-426
               

               
Cow position:
               
chr3:24457050-24456636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
179, 103
               

               
Conread position:
               
13-435
               

               
Cow position:
               
chr3:42449263-42449685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
20, 139
               

               
Conread position:
               
13-444
               

               
Cow position:
               
chr3:31121994-31121554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 171
               

               
Conread position:
               
13-444
               

               
Cow position:
               
chr3:34875591-34876032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 13
               

               
Conread position:
               
13-444
               

               
Cow position:
               
chr3:56337803-56337362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
13-446
               

               
Cow position:
               
chr3:33844445-33844014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 256
               

               
Conread position:
               
13-447
               

               
Cow position:
               
chr3:2708715-2708277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 82
               

               
Conread position:
               
13-447
               

               
Cow position:
               
chr3:19946396-19946837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 83
               

               
Conread position:
               
13-447
               

               
Cow position:
               
chr3:72632221-72632663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 149
               

               
Conread position:
               
13-479
               

               
Cow position:
               
chr3:80940922-80940448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
103, 24
               

               
Conread position:
               
13-513
               

               
Cow position:
               
chr3:56147461-56147962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
13-725
               

               
Cow position:
               
chr3:49135408-49134705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 83
               

               
Conread position:
               
13-746
               

               
Cow position:
               
chr3:38002287-38002982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 53
               

               
Conread position:
               
13-760
               

               
Cow position:
               
chr3:5885656-5886389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
768
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 122
               

               
Conread position:
               
13-760
               

               
Cow position:
               
chr3:18813661-18814396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
765
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 128
               

               
Conread position:
               
13-760
               

               
Cow position:
               
chr3:45976651-45977392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
768
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 446
               

               
Conread position:
               
14-200
               

               
Cow position:
               
chr3:50907548-50907738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
14-211
               

               
Cow position:
               
chr3:75776469-75776669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
110, 23
               

               
Conread position:
               
14-383
               

               
Cow position:
               
chr3:20018927-20019293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
98, 76
               

               
Conread position:
               
14-682
               

               
Cow position:
               
chr3:67532312-67532962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 41
               

               
Conread position:
               
15-393
               

               
Cow position:
               
chr3:64428068-64427697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 71
               

               
Conread position:
               
19-404
               

               
Cow position:
               
chr3:12688703-12688329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
5, 85
               

               
Conread position:
               
19-444
               

               
Cow position:
               
chr3:62787567-62787154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 30
               

               
Conread position:
               
21-398
               

               
Cow position:
               
chr3:36690035-36689649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
25-234
               

               
Cow position:
               
chr3:60080499-60080288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
8, 115
               

               
Conread position:
               
25-294
               

               
Cow position:
               
chr3:14798581-14798860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
25-404
               

               
Cow position:
               
chr3:32704283-32703893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
164, 342
               

               
Conread position:
               
25-480
               

               
Cow position:
               
chr3:56399406-56399893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
10, 72
               

               
Conread position:
               
26-187
               

               
Cow position:
               
chr3:37657810-37657968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
41, 46
               

               
Conread position:
               
26-207
               

               
Cow position:
               
chr3:77425882-77426051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
162, 77
               

               
Conread position:
               
26-208
               

               
Cow position:
               
chr3:11784381-11784196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
26-210
               

               
Cow position:
               
chr3:37644454-37644637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
104, 139
               

               
Conread position:
               
26-216
               

               
Cow position:
               
chr3:4288247-4288439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
98, 174
               

               
Conread position:
               
26-216
               

               
Cow position:
               
chr3:28670252-28670444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
26-221
               

               
Cow position:
               
chr3:2904871-2904674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 28
               

               
Conread position:
               
26-221
               

               
Cow position:
               
chr3:15095881-15096081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
99, 131
               

               
Conread position:
               
26-221
               

               
Cow position:
               
chr3:64814017-64813822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
160, 119
               

               
Conread position:
               
26-221
               

               
Cow position:
               
chr3:72573465-72573271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
66, 112
               

               
Conread position:
               
26-253
               

               
Cow position:
               
chr3:64323400-64323160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 31
               

               
Conread position:
               
26-261
               

               
Cow position:
               
chr3:6323820-6324064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
26-272
               

               
Cow position:
               
chr3:15053540-15053298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
30, 50
               

               
Conread position:
               
26-293
               

               
Cow position:
               
chr3:64214919-64214657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
166, 80
               

               
Conread position:
               
26-318
               

               
Cow position:
               
chr3:2870959-2871260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
26-335
               

               
Cow position:
               
chr3:21103299-21102986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
97, 185
               

               
Conread position:
               
26-342
               

               
Cow position:
               
chr3:35886179-35885850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
100, 120
               

               
Conread position:
               
26-351
               

               
Cow position:
               
chr3:49003333-49003667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 292
               

               
Conread position:
               
26-364
               

               
Cow position:
               
chr3:2366979-2366632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
26-381
               

               
Cow position:
               
chr3:61675865-61676220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 125
               

               
Conread position:
               
26-381
               

               
Cow position:
               
chr3:64813281-64812917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 126
               

               
Conread position:
               
26-382
               

               
Cow position:
               
chr3:1031137-1031495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 125
               

               
Conread position:
               
26-382
               

               
Cow position:
               
chr3:30990082-30989717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
26-382
               

               
Cow position:
               
chr3:53881315-53880957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 125
               

               
Conread position:
               
26-382
               

               
Cow position:
               
chr3:57996280-57996645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
26-382
               

               
Cow position:
               
chr3:84112600-84112955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
166, 98
               

               
Conread position:
               
26-384
               

               
Cow position:
               
chr3:36876496-36876130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 68
               

               
Conread position:
               
26-387
               

               
Cow position:
               
chr3:74850969-74850601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 339
               

               
Conread position:
               
26-399
               

               
Cow position:
               
chr3:76004628-76004249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
98, 45
               

               
Conread position:
               
26-400
               

               
Cow position:
               
chr3:36716474-36716098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 28
               

               
Conread position:
               
26-402
               

               
Cow position:
               
chr3:12004457-12004067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
163, 95
               

               
Conread position:
               
26-422
               

               
Cow position:
               
chr3:4029897-4030319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
104, 65
               

               
Conread position:
               
26-427
               

               
Cow position:
               
chr3:599664-600053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 98
               

               
Conread position:
               
26-434
               

               
Cow position:
               
chr3:66622381-66622796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 126
               

               
Conread position:
               
26-435
               

               
Cow position:
               
chr3:19796033-19795617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
26-435
               

               
Cow position:
               
chr3:23009557-23009973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 126
               

               
Conread position:
               
26-435
               

               
Cow position:
               
chr3:64025967-64025549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 37
               

               
Conread position:
               
26-436
               

               
Cow position:
               
chr3:39556422-39555998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 107
               

               
Conread position:
               
26-438
               

               
Cow position:
               
chr3:50124829-50124417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
26-443
               

               
Cow position:
               
chr3:48239425-48239847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
106, 168
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr3:7156548-7156125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 292
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr3:18113524-18113097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 390
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr3:18861605-18862033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr3:34505183-34504757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 20
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr3:42151620-42151197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 101
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr3:49543039-49542611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 91
               

               
Conread position:
               
26-446
               

               
Cow position:
               
chr3:21003984-21004406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
110, 168
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr3:10242820-10243254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
95, 119
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr3:19754792-19754368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 98
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr3:29329120-29328689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr3:29574951-29574527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 75
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr3:34028760-34028331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 107
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr3:36401761-36402190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
95, 167
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr3:40825561-40825990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 416
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr3:43191108-43190677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr3:53048621-53048186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
98, 179
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr3:53517748-53518190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
57, 134
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr3:54654933-54655364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 273
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr3:63690091-63689651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 292
               

               
Conread position:
               
26-450
               

               
Cow position:
               
chr3:14862366-14862800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
78, 364
               

               
Conread position:
               
26-479
               

               
Cow position:
               
chr3:3525208-3525656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 208
               

               
Conread position:
               
26-479
               

               
Cow position:
               
chr3:27865340-27865798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 100
               

               
Conread position:
               
26-480
               

               
Cow position:
               
chr3:67628593-67628131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
26-513
               

               
Cow position:
               
chr3:63278449-63277976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 91
               

               
Conread position:
               
26-709
               

               
Cow position:
               
chr3:46687044-46686389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
163, 55
               

               
Conread position:
               
26-740
               

               
Cow position:
               
chr3:20380561-20379848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 259
               

               
Conread position:
               
26-746
               

               
Cow position:
               
chr3:13035852-13036566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 393
               

               
Conread position:
               
26-755
               

               
Cow position:
               
chr3:57482557-57481851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 75
               

               
Conread position:
               
26-759
               

               
Cow position:
               
chr3:26743709-26742980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 433
               

               
Conread position:
               
26-759
               

               
Cow position:
               
chr3:41208433-41207708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 393
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr3:7246942-7246214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
759
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 125
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr3:13724552-13723823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 296
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr3:16225053-16225767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 98
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr3:19798990-19798262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 418
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr3:22338084-22338798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 241
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr3:23288170-23287445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 126
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr3:24443932-24443204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 432
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr3:24587081-24586339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 425
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr3:32620879-32620151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 432
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr3:34014504-34015232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 73
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr3:35611326-35612044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 126
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr3:37971217-37971933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 126
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr3:40337977-40337253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 283
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr3:41082336-41083053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 140
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr3:46859122-46858393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 432
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr3:47079444-47078724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 73
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr3:48845165-48845896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
757
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 435
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr3:49563174-49563901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 44
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr3:64652829-64653559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 432
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr3:66969717-66968989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 317
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr3:68697803-68697075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 8
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr3:68718544-68717819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 432
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr3:68871585-68870860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 8
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr3:68890406-68889682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 126
               

               
Conread position:
               
26-760
               

               
Cow position:
               
chr3:69931671-69930944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 430
               

               
Conread position:
               
26-762
               

               
Cow position:
               
chr3:13477508-13478225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 164
               

               
Conread position:
               
26-763
               

               
Cow position:
               
chr3:6784572-6785301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
26-765
               

               
Cow position:
               
chr3:18760235-18759521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 81
               

               
Conread position:
               
26-775
               

               
Cow position:
               
chr3:19882657-19883374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 60
               

               
Conread position:
               
26-775
               

               
Cow position:
               
chr3:49998305-49999042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
767
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 12
               

               
Conread position:
               
26-783
               

               
Cow position:
               
chr3:27920612-27921367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
783
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 260
               

               
Conread position:
               
26-783
               

               
Cow position:
               
chr3:29129260-29130010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
776
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 124
               

               
Conread position:
               
26-952
               

               
Cow position:
               
chr3:49908850-49907925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
955
               

               
Alignm identity:
               
609
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 418
               

               
Conread position:
               
26-1169
               

               
Cow position:
               
chr3:30320426-30321593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1199
               

               
Alignm identity:
               
755
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 394
               

               
Conread position:
               
26-1169
               

               
Cow position:
               
chr3:72670387-72669223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1185
               

               
Alignm identity:
               
716
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 86
               

               
Conread position:
               
26-1169
               

               
Cow position:
               
chr3:78025270-78024099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1206
               

               
Alignm identity:
               
777
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 432
               

               
Conread position:
               
27-293
               

               
Cow position:
               
chr3:37010015-37009740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
27-361
               

               
Cow position:
               
chr3:64691207-64691556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
73, 67
               

               
Conread position:
               
27-378
               

               
Cow position:
               
chr3:51937903-51937549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
163, 96
               

               
Conread position:
               
27-408
               

               
Cow position:
               
chr3:38868748-38869135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 116
               

               
Conread position:
               
27-443
               

               
Cow position:
               
chr3:62881535-62881955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 86
               

               
Conread position:
               
27-479
               

               
Cow position:
               
chr3:22045993-22045523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 170
               

               
Conread position:
               
27-479
               

               
Cow position:
               
chr3:44670687-44670213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
27-760
               

               
Cow position:
               
chr3:7477754-7477031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
27-775
               

               
Cow position:
               
chr3:72389127-72389877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
776
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 68
               

               
Conread position:
               
28-187
               

               
Cow position:
               
chr3:16077458-16077615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 45
               

               
Conread position:
               
29-447
               

               
Cow position:
               
chr3:596299-596714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
95, 117
               

               
Conread position:
               
29-475
               

               
Cow position:
               
chr3:76839178-76839624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
169, 56
               

               
Conread position:
               
29-760
               

               
Cow position:
               
chr3:83766418-83767143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 438
               

               
Conread position:
               
29-782
               

               
Cow position:
               
chr3:59863733-59864468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
774
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 105
               

               
Conread position:
               
31-308
               

               
Cow position:
               
chr3:61413827-61414095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
95, 29
               

               
Conread position:
               
31-467
               

               
Cow position:
               
chr3:74059645-74060088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 25
               

               
Conread position:
               
32-194
               

               
Cow position:
               
chr3:17058059-17057900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
84, 113
               

               
Conread position:
               
32-369
               

               
Cow position:
               
chr3:31527677-31527345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 97
               

               
Conread position:
               
32-387
               

               
Cow position:
               
chr3:53413261-53413608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
92, 114
               

               
Conread position:
               
32-423
               

               
Cow position:
               
chr3:18461941-18461552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
157, 29
               

               
Conread position:
               
32-446
               

               
Cow position:
               
chr3:22771863-22771457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
181, 58
               

               
Conread position:
               
32-447
               

               
Cow position:
               
chr3:25688839-25689246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 97
               

               
Conread position:
               
32-759
               

               
Cow position:
               
chr3:50203709-50204435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 183
               

               
Conread position:
               
33-275
               

               
Cow position:
               
chr3:29641591-29641835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
156, 91
               

               
Conread position:
               
33-345
               

               
Cow position:
               
chr3:46127544-46127222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
82, 143
               

               
Conread position:
               
33-384
               

               
Cow position:
               
chr3:7326441-7326788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
159, 122
               

               
Conread position:
               
33-443
               

               
Cow position:
               
chr3:19781872-19782276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
93, 224
               

               
Conread position:
               
33-738
               

               
Cow position:
               
chr3:22725597-22724902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 114
               

               
Conread position:
               
34-423
               

               
Cow position:
               
chr3:19806956-19807354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 49
               

               
Conread position:
               
34-443
               

               
Cow position:
               
chr3:77580798-77581209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
158, 56
               

               
Conread position:
               
34-478
               

               
Cow position:
               
chr3:65920030-65920470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 40
               

               
Conread position:
               
36-444
               

               
Cow position:
               
chr3:42315195-42315607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
16, 184
               

               
Conread position:
               
37-767
               

               
Cow position:
               
chr3:38495951-38496668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
155, 106
               

               
Conread position:
               
39-366
               

               
Cow position:
               
chr3:54787246-54787590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 61
               

               
Conread position:
               
39-677
               

               
Cow position:
               
chr3:52510445-52511058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 98
               

               
Conread position:
               
41-359
               

               
Cow position:
               
chr3:62820980-62821294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
26, 158
               

               
Conread position:
               
43-225
               

               
Cow position:
               
chr3:42824608-42824792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
43-269
               

               
Cow position:
               
chr3:40297769-40297537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
24, 30
               

               
Conread position:
               
43-446
               

               
Cow position:
               
chr3:72106613-72106211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
81, 156
               

               
Conread position:
               
43-760
               

               
Cow position:
               
chr3:31020863-31021572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 11
               

               
Conread position:
               
54-326
               

               
Cow position:
               
chr3:16055583-16055310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
72, 126
               

               
Conread position:
               
62-438
               

               
Cow position:
               
chr3:69963594-69963215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
64, 89
               

               
Conread position:
               
68-292
               

               
Cow position:
               
chr3:43317661-43317430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
59, 105
               

               
Conread position:
               
71-274
               

               
Cow position:
               
chr3:77452500-77452707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
53, 110
               

               
Conread position:
               
71-402
               

               
Cow position:
               
chr3:21223574-21223240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 225
               

               
Conread position:
               
71-760
               

               
Cow position:
               
chr3:15415677-15416356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 247
               

               
Conread position:
               
73-447
               

               
Cow position:
               
chr3:78218129-78218515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 63
               

               
Conread position:
               
75-444
               

               
Cow position:
               
chr3:82930848-82931225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 262
               

               
Conread position:
               
76-422
               

               
Cow position:
               
chr3:6663628-6663976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
48, 230
               

               
Conread position:
               
78-381
               

               
Cow position:
               
chr3:81167265-81166955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
86-303
               

               
Cow position:
               
chr3:943860-944082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
87-339
               

               
Cow position:
               
chr3:7950244-7949984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
37, 148
               

               
Conread position:
               
92-444
               

               
Cow position:
               
chr3:21027161-21026817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
93-337
               

               
Cow position:
               
chr3:61555399-61555151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
24, 76
               

               
Conread position:
               
94-305
               

               
Cow position:
               
chr3:27686697-27686914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
98, 26
               

               
Conread position:
               
95-365
               

               
Cow position:
               
chr3:45692753-45692484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
97, 24
               

               
Conread position:
               
95-399
               

               
Cow position:
               
chr3:19125535-19125841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
96, 29
               

               
Conread position:
               
96-349
               

               
Cow position:
               
chr3:77366843-77366578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 44
               

               
Conread position:
               
96-449
               

               
Cow position:
               
chr3:4778187-4778531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
138, 28
               

               
Conread position:
               
98-381
               

               
Cow position:
               
chr3:80931198-80930912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
19, 83
               

               
Conread position:
               
98-423
               

               
Cow position:
               
chr3:62913317-62913005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
26, 93
               

               
Conread position:
               
100-221
               

               
Cow position:
               
chr3:54773164-54773285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 98
               

               
Conread position:
               
108-479
               

               
Cow position:
               
chr3:38491700-38492081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
5, 30
               

               
Conread position:
               
109-446
               

               
Cow position:
               
chr3:56912129-56912456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 15
               

               
Conread position:
               
109-485
               

               
Cow position:
               
chr3:1652580-1652219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
111-447
               

               
Cow position:
               
chr3:29580912-29581257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 326
               

               
Conread position:
               
113-298
               

               
Cow position:
               
chr3:14924376-14924561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 37
               

               
Conread position:
               
113-760
               

               
Cow position:
               
chr3:6713262-6713897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 37
               

               
Conread position:
               
115-336
               

               
Cow position:
               
chr3:43627243-43627025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
115-423
               

               
Cow position:
               
chr3:82362885-82363204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
51, 34
               

               
Conread position:
               
115-478
               

               
Cow position:
               
chr3:39659803-39659437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
75, 49
               

               
Conread position:
               
115-479
               

               
Cow position:
               
chr3:77062723-77062342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
51, 29
               

               
Conread position:
               
117-447
               

               
Cow position:
               
chr3:14451916-14452252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
111, 34
               

               
Conread position:
               
117-447
               

               
Cow position:
               
chr3:49335468-49335794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
108, 75
               

               
Conread position:
               
117-775
               

               
Cow position:
               
chr3:34458611-34457962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 339
               

               
Conread position:
               
118-297
               

               
Cow position:
               
chr3:45614813-45614999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
118-435
               

               
Cow position:
               
chr3:25470309-25470620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
9, 75
               

               
Conread position:
               
120-298
               

               
Cow position:
               
chr3:76650018-76649839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
120-373
               

               
Cow position:
               
chr3:71144672-71144414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
72, 131
               

               
Conread position:
               
121-425
               

               
Cow position:
               
chr3:29550108-29549804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
69, 36
               

               
Conread position:
               
121-428
               

               
Cow position:
               
chr3:67770839-67771159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
68, 213
               

               
Conread position:
               
123-423
               

               
Cow position:
               
chr3:85103456-85103762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
71, 144
               

               
Conread position:
               
124-325
               

               
Cow position:
               
chr3:39080790-39080998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
125-444
               

               
Cow position:
               
chr3:32491581-32491908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
128-444
               

               
Cow position:
               
chr3:6382503-6382828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
129-367
               

               
Cow position:
               
chr3:46387660-46387893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
63, 36
               

               
Conread position:
               
129-479
               

               
Cow position:
               
chr3:61886309-61886654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
38, 93
               

               
Conread position:
               
131-367
               

               
Cow position:
               
chr3:44364045-44364297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 178
               

               
Conread position:
               
135-424
               

               
Cow position:
               
chr3:77445945-77446234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
92, 46
               

               
Conread position:
               
139-447
               

               
Cow position:
               
chr3:44926102-44926415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 183
               

               
Conread position:
               
145-340
               

               
Cow position:
               
chr3:26752145-26751946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
41, 88
               

               
Conread position:
               
149-479
               

               
Cow position:
               
chr3:64134639-64134982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
43, 222
               

               
Conread position:
               
150-760
               

               
Cow position:
               
chr3:24264489-24265092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 307
               

               
Conread position:
               
151-435
               

               
Cow position:
               
chr3:32218105-32218395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
154-463
               

               
Cow position:
               
chr3:22949166-22948846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
51, 164
               

               
Conread position:
               
157-736
               

               
Cow position:
               
chr3:59331749-59332326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
35, 285
               

               
Conread position:
               
170-733
               

               
Cow position:
               
chr3:78624660-78625186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
382, 19
               

               
Conread position:
               
172-427
               

               
Cow position:
               
chr3:74848835-74848575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 126
               

               
Conread position:
               
181-447
               

               
Cow position:
               
chr3:18354017-18353762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
183-480
               

               
Cow position:
               
chr3:46807494-46807795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 138
               

               
Conread position:
               
188-311
               

               
Cow position:
               
chr3:47695639-47695767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
188-480
               

               
Cow position:
               
chr3:8241945-8242245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
35, 161
               

               
Conread position:
               
191-382
               

               
Cow position:
               
chr3:4289125-4288928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
191-663
               

               
Cow position:
               
chr3:2920577-2921034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
29, 273
               

               
Conread position:
               
201-447
               

               
Cow position:
               
chr3:82706955-82706709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
15, 108
               

               
Conread position:
               
210-479
               

               
Cow position:
               
chr3:43345882-43345611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
19, 14
               

               
Conread position:
               
219-416
               

               
Cow position:
               
chr3:51457360-51457548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
220-447
               

               
Cow position:
               
chr3:26595410-26595636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
182, 99
               

               
Conread position:
               
220-479
               

               
Cow position:
               
chr3:80305859-80306114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
168, 80
               

               
Conread position:
               
221-435
               

               
Cow position:
               
chr3:58035899-58036109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
168, 79
               

               
Conread position:
               
222-382
               

               
Cow position:
               
chr3:6837669-6837511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
222-382
               

               
Cow position:
               
chr3:40349843-40349687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
222-435
               

               
Cow position:
               
chr3:61276960-61277174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
222-444
               

               
Cow position:
               
chr3:33635782-33636000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
167, 82
               

               
Conread position:
               
222-444
               

               
Cow position:
               
chr3:39871804-39871584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
153, 61
               

               
Conread position:
               
222-479
               

               
Cow position:
               
chr3:15656909-15656659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
166, 180
               

               
Conread position:
               
222-480
               

               
Cow position:
               
chr3:5421510-5421257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
192, 169
               

               
Conread position:
               
222-480
               

               
Cow position:
               
chr3:79430311-79430057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
166, 27
               

               
Conread position:
               
222-760
               

               
Cow position:
               
chr3:12664304-12664823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
167, 87
               

               
Conread position:
               
222-1224
               

               
Cow position:
               
chr3:323487-322466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1046
               

               
Alignm identity:
               
657
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 47
               

               
Conread position:
               
223-423
               

               
Cow position:
               
chr3:56918825-56919012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 47
               

               
Conread position:
               
225-447
               

               
Cow position:
               
chr3:21179873-21179648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
225-479
               

               
Cow position:
               
chr3:58027778-58027535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
220, 22
               

               
Conread position:
               
225-735
               

               
Cow position:
               
chr3:37658337-37658841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
189, 132
               

               
Conread position:
               
228-372
               

               
Cow position:
               
chr3:26683284-26683140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
228-754
               

               
Cow position:
               
chr3:32327054-32326538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
89, 72
               

               
Conread position:
               
228-767
               

               
Cow position:
               
chr3:80478697-80478184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
160, 50
               

               
Conread position:
               
229-422
               

               
Cow position:
               
chr3:50918950-50919142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
229-455
               

               
Cow position:
               
chr3:15724359-15724580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
175, 71
               

               
Conread position:
               
238-478
               

               
Cow position:
               
chr3:53647561-53647318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
151, 81
               

               
Conread position:
               
241-420
               

               
Cow position:
               
chr3:21336163-21336339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
248-478
               

               
Cow position:
               
chr3:69422057-69421832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
141, 48
               

               
Conread position:
               
255-444
               

               
Cow position:
               
chr3:53925658-53925475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
144, 60
               

               
Conread position:
               
256-444
               

               
Cow position:
               
chr3:26298615-26298426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
133, 154
               

               
Conread position:
               
271-479
               

               
Cow position:
               
chr3:68128819-68128612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
106, 16
               

               
Conread position:
               
271-760
               

               
Cow position:
               
chr3:56296801-56297274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
118, 80
               

               
Conread position:
               
271-1172
               

               
Cow position:
               
chr3:57978107-57977215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
924
               

               
Alignm identity:
               
563
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 58
               

               
Conread position:
               
310-488
               

               
Cow position:
               
chr3:47696261-47696441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 19
               

               
Conread position:
               
357-730
               

               
Cow position:
               
chr3:43044141-43044519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
488-952
               

               
Cow position:
               
chr3:31396008-31396481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
493-759
               

               
Cow position:
               
chr3:58855842-58856109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
34, 8
               

               
Conread position:
               
495-746
               

               
Cow position:
               
chr3:8242231-8242487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
32, 93
               

               
Conread position:
               
495-748
               

               
Cow position:
               
chr3:67781086-67781340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
34, 94
               

               
Conread position:
               
495-760
               

               
Cow position:
               
chr3:36120499-36120774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
495-769
               

               
Cow position:
               
chr3:67628145-67627861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
512-740
               

               
Cow position:
               
chr3:62786405-62786173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 142
               

               
Conread position:
               
525-760
               

               
Cow position:
               
chr3:80939965-80939737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
27, 121
               

               
Conread position:
               
526-738
               

               
Cow position:
               
chr3:73396623-73396835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
26, 144
               

               
Conread position:
               
526-740
               

               
Cow position:
               
chr3:14265869-14265650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 120
               

               
Conread position:
               
526-756
               

               
Cow position:
               
chr3:73637928-73638170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
526-965
               

               
Cow position:
               
chr3:3664642-3665094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 119
               

               
Conread position:
               
526-1170
               

               
Cow position:
               
chr3:64427599-64426962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
27, 96
               

               
Conread position:
               
531-741
               

               
Cow position:
               
chr3:18194590-18194801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
22, 51
               

               
Conread position:
               
531-1139
               

               
Cow position:
               
chr3:22045500-22044852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
21, 127
               

               
Conread position:
               
535-756
               

               
Cow position:
               
chr3:43230310-43230534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
536-723
               

               
Cow position:
               
chr3:12687826-12687639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 64
               

               
Conread position:
               
537-760
               

               
Cow position:
               
chr3:37280055-37280285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 134
               

               
Conread position:
               
537-760
               

               
Cow position:
               
chr3:43526079-43525849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
16, 60
               

               
Conread position:
               
537-763
               

               
Cow position:
               
chr3:74060134-74060367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 134
               

               
Conread position:
               
537-1092
               

               
Cow position:
               
chr3:34875121-34874574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
16, 116
               

               
Conread position:
               
541-1125
               

               
Cow position:
               
chr3:10931552-10932157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
12, 56
               

               
Conread position:
               
542-1168
               

               
Cow position:
               
chr3:24263162-24262508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
19, 47
               

               
Conread position:
               
549-768
               

               
Cow position:
               
chr3:44364717-44364938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 160
               

               
Conread position:
               
551-757
               

               
Cow position:
               
chr3:35619261-35619473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
551-757
               

               
Cow position:
               
chr3:48602926-48603138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 119
               

               
Conread position:
               
551-760
               

               
Cow position:
               
chr3:1033537-1033752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
17, 72
               

               
Conread position:
               
602-1017
               

               
Cow position:
               
chr3:24904429-24904862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
62, 42
               

               
Conread position:
               
608-1040
               

               
Cow position:
               
chr3:69442816-69442363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
119, 209
               

               
Conread position:
               
771-1224
               

               
Cow position:
               
chr3:53924746-53924284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
46, 72
               

               
Conread position:
               
774-1164
               

               
Cow position:
               
chr3:73638208-73638603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 32
               

               
Conread position:
               
884-1137
               

               
Cow position:
               
chr3:56023429-56023688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
75, 61
               

               
Conread position:
               
884-1170
               

               
Cow position:
               
chr3:74132912-74132616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 234
               

               
Conread position:
               
884-1224
               

               
Cow position:
               
chr3:27091146-27090794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
5, 172
               

               
Conread position:
               
884-1224
               

               
Cow position:
               
chr3:27223088-27223429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 40
               

               
Conread position:
               
884-1224
               

               
Cow position:
               
chr3:41654587-41654938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
37, 107
               

               
Conread position:
               
884-1224
               

               
Cow position:
               
chr3:51457960-51458298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
76, 11
               

               
Conread position:
               
885-1224
               

               
Cow position:
               
chr3:42983198-42982858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 33
               

               
Conread position:
               
888-1170
               

               
Cow position:
               
chr3:39233632-39233927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
68, 57
               

               
Conread position:
               
888-1221
               

               
Cow position:
               
chr3:10855261-10854925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
61, 101
               

               
Conread position:
               
949-1224
               

               
Cow position:
               
chr3:8563945-8563677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
200, 96
               

               
Conread position:
               
949-1224
               

               
Cow position:
               
chr3:43671490-43671216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
123, 88
               

               
Conread position:
               
949-1224
               

               
Cow position:
               
chr3:57531247-57531531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
124, 78
               

               
Conread position:
               
952-1224
               

               
Cow position:
               
chr3:65961008-65961279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 91
               

               
Conread position:
               
957-1221
               

               
Cow position:
               
chr3:47696933-47697199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
214, 111
               

               
Conread position:
               
957-1224
               

               
Cow position:
               
chr3:55454937-55454664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 136
               

               
Conread position:
               
963-1203
               

               
Cow position:
               
chr3:63273270-63273512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
97, 19
               
Show alignments to all cow chromosomes.