Cow genome map

Conread name: Ss1.1-rpliv0129_b1.5.5

Conread position: 1-333
Cow position:
Alignm length: 347
Alignm identity: 230
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 151

Conread position: 1-422
Cow position:
Alignm length: 434
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 152

Conread position: 1-458
Cow position:
Alignm length: 468
Alignm identity: 293
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 147

Conread position: 2-180
Cow position:
Alignm length: 182
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 66

Conread position: 2-187
Cow position:
Alignm length: 189
Alignm identity: 143
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 31, 98

Conread position: 2-228
Cow position:
Alignm length: 233
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 96

Conread position: 2-298
Cow position:
Alignm length: 303
Alignm identity: 206
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 6, 71

Conread position: 2-331
Cow position:
Alignm length: 351
Alignm identity: 237
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 6, 17

Conread position: 2-342
Cow position:
Alignm length: 357
Alignm identity: 228
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 26

Conread position: 2-362
Cow position:
Alignm length: 385
Alignm identity: 249
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 2-368
Cow position:
Alignm length: 385
Alignm identity: 257
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 83

Conread position: 2-370
Cow position:
Alignm length: 389
Alignm identity: 253
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 31, 200

Conread position: 2-384
Cow position:
Alignm length: 400
Alignm identity: 268
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 31, 0

Conread position: 2-387
Cow position:
Alignm length: 390
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 94

Conread position: 2-418
Cow position:
Alignm length: 431
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 146

Conread position: 2-419
Cow position:
Alignm length: 429
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 70

Conread position: 2-422
Cow position:
Alignm length: 428
Alignm identity: 284
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 34, 119

Conread position: 2-435
Cow position:
Alignm length: 444
Alignm identity: 300
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 114, 24

Conread position: 2-435
Cow position:
Alignm length: 458
Alignm identity: 307
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 31, 45

Conread position: 2-436
Cow position:
Alignm length: 439
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 123

Conread position: 2-469
Cow position:
Alignm length: 480
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 42

Conread position: 2-478
Cow position:
Alignm length: 484
Alignm identity: 313
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 25, 67

Conread position: 2-479
Cow position:
Alignm length: 491
Alignm identity: 316
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 108, 21

Conread position: 2-480
Cow position:
Alignm length: 500
Alignm identity: 342
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 65, 131

Conread position: 2-656
Cow position:
Alignm length: 675
Alignm identity: 434
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 31, 141

Conread position: 2-784
Cow position:
Alignm length: 800
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 121

Conread position: 3-183
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 69

Conread position: 3-296
Cow position:
Alignm length: 298
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 123

Conread position: 3-298
Cow position:
Alignm length: 306
Alignm identity: 213
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 24, 54

Conread position: 3-381
Cow position:
Alignm length: 391
Alignm identity: 257
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 24, 0

Conread position: 3-389
Cow position:
Alignm length: 395
Alignm identity: 244
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 87

Conread position: 3-422
Cow position:
Alignm length: 430
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 54

Conread position: 3-434
Cow position:
Alignm length: 447
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 133

Conread position: 3-447
Cow position:
Alignm length: 455
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 45

Conread position: 3-447
Cow position:
Alignm length: 456
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 144

Conread position: 3-447
Cow position:
Alignm length: 456
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 3-760
Cow position:
Alignm length: 778
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 456

Conread position: 3-760
Cow position:
Alignm length: 777
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 456

Conread position: 3-760
Cow position:
Alignm length: 777
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 163

Conread position: 4-334
Cow position:
Alignm length: 341
Alignm identity: 240
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 31, 43

Conread position: 6-480
Cow position:
Alignm length: 498
Alignm identity: 332
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 14, 195

Conread position: 9-380
Cow position:
Alignm length: 377
Alignm identity: 249
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 18, 9

Conread position: 11-216
Cow position:
Alignm length: 210
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 119, 12

Conread position: 12-187
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 12-341
Cow position:
Alignm length: 336
Alignm identity: 227
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 15, 38

Conread position: 12-362
Cow position:
Alignm length: 363
Alignm identity: 244
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 104, 62

Conread position: 12-381
Cow position:
Alignm length: 380
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 6

Conread position: 12-399
Cow position:
Alignm length: 394
Alignm identity: 256
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 176, 80

Conread position: 12-434
Cow position:
Alignm length: 442
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 6

Conread position: 12-435
Cow position:
Alignm length: 433
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 6

Conread position: 12-447
Cow position:
Alignm length: 447
Alignm identity: 298
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 111, 53

Conread position: 12-447
Cow position:
Alignm length: 447
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 6

Conread position: 12-448
Cow position:
Alignm length: 445
Alignm identity: 292
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 176, 37

Conread position: 12-454
Cow position:
Alignm length: 455
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 102

Conread position: 12-458
Cow position:
Alignm length: 459
Alignm identity: 299
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 77, 13

Conread position: 12-760
Cow position:
Alignm length: 762
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 6

Conread position: 12-760
Cow position:
Alignm length: 766
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 43

Conread position: 12-775
Cow position:
Alignm length: 787
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 305

Conread position: 13-187
Cow position:
Alignm length: 182
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 13-257
Cow position:
Alignm length: 249
Alignm identity: 167
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 8, 209

Conread position: 13-283
Cow position:
Alignm length: 284
Alignm identity: 195
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 21, 63

Conread position: 13-294
Cow position:
Alignm length: 298
Alignm identity: 211
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 21, 38

Conread position: 13-298
Cow position:
Alignm length: 293
Alignm identity: 204
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 90

Conread position: 13-378
Cow position:
Alignm length: 373
Alignm identity: 246
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 14, 41

Conread position: 13-379
Cow position:
Alignm length: 384
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 306

Conread position: 13-444
Cow position:
Alignm length: 443
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 36

Conread position: 13-444
Cow position:
Alignm length: 443
Alignm identity: 294
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 18, 134

Conread position: 13-447
Cow position:
Alignm length: 445
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 13-447
Cow position:
Alignm length: 447
Alignm identity: 292
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 18, 133

Conread position: 13-447
Cow position:
Alignm length: 448
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 134

Conread position: 13-447
Cow position:
Alignm length: 448
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 94

Conread position: 13-455
Cow position:
Alignm length: 454
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 155

Conread position: 13-758
Cow position:
Alignm length: 764
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 140

Conread position: 13-760
Cow position:
Alignm length: 774
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 28

Conread position: 13-775
Cow position:
Alignm length: 780
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 161

Conread position: 14-310
Cow position:
Alignm length: 301
Alignm identity: 211
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 172, 109

Conread position: 14-422
Cow position:
Alignm length: 420
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 152

Conread position: 14-426
Cow position:
Alignm length: 428
Alignm identity: 273
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 62

Conread position: 15-479
Cow position:
Alignm length: 475
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 77

Conread position: 17-477
Cow position:
Alignm length: 472
Alignm identity: 307
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 48, 55

Conread position: 19-325
Cow position:
Alignm length: 316
Alignm identity: 221
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 105, 140

Conread position: 20-736
Cow position:
Alignm length: 731
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 6

Conread position: 23-435
Cow position:
Alignm length: 423
Alignm identity: 270
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 18, 131

Conread position: 25-304
Cow position:
Alignm length: 284
Alignm identity: 201
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 7, 165

Conread position: 25-469
Cow position:
Alignm length: 454
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 27

Conread position: 26-172
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 26-187
Cow position:
Alignm length: 164
Alignm identity: 118
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 89, 121

Conread position: 26-188
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 26-190
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 95, 0

Conread position: 26-200
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 26-212
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 26-215
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 26-225
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 41, 51

Conread position: 26-228
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 163, 138

Conread position: 26-229
Cow position:
Alignm length: 207
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 20

Conread position: 26-264
Cow position:
Alignm length: 246
Alignm identity: 167
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 59, 70

Conread position: 26-273
Cow position:
Alignm length: 257
Alignm identity: 184
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 98, 0

Conread position: 26-273
Cow position:
Alignm length: 255
Alignm identity: 185
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 104, 0

Conread position: 26-283
Cow position:
Alignm length: 270
Alignm identity: 187
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 115, 67

Conread position: 26-284
Cow position:
Alignm length: 272
Alignm identity: 197
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 91, 125

Conread position: 26-291
Cow position:
Alignm length: 268
Alignm identity: 188
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 93, 139

Conread position: 26-297
Cow position:
Alignm length: 281
Alignm identity: 201
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 98, 44

Conread position: 26-298
Cow position:
Alignm length: 282
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 26-303
Cow position:
Alignm length: 282
Alignm identity: 193
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 163, 172

Conread position: 26-342
Cow position:
Alignm length: 326
Alignm identity: 226
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 89, 114

Conread position: 26-352
Cow position:
Alignm length: 348
Alignm identity: 242
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 99, 24

Conread position: 26-380
Cow position:
Alignm length: 362
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 174

Conread position: 26-381
Cow position:
Alignm length: 363
Alignm identity: 250
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 77, 14

Conread position: 26-381
Cow position:
Alignm length: 365
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 140

Conread position: 26-382
Cow position:
Alignm length: 367
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 26-382
Cow position:
Alignm length: 365
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 91

Conread position: 26-382
Cow position:
Alignm length: 366
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 297

Conread position: 26-384
Cow position:
Alignm length: 367
Alignm identity: 253
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 166, 80

Conread position: 26-399
Cow position:
Alignm length: 403
Alignm identity: 276
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 100, 20

Conread position: 26-399
Cow position:
Alignm length: 386
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 94

Conread position: 26-419
Cow position:
Alignm length: 401
Alignm identity: 271
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 163, 91

Conread position: 26-419
Cow position:
Alignm length: 401
Alignm identity: 266
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 95, 17

Conread position: 26-421
Cow position:
Alignm length: 407
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 26-422
Cow position:
Alignm length: 407
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 355

Conread position: 26-426
Cow position:
Alignm length: 415
Alignm identity: 284
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 32, 36

Conread position: 26-427
Cow position:
Alignm length: 412
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 26-427
Cow position:
Alignm length: 412
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 234

Conread position: 26-435
Cow position:
Alignm length: 421
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 74

Conread position: 26-439
Cow position:
Alignm length: 416
Alignm identity: 281
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 166, 22

Conread position: 26-439
Cow position:
Alignm length: 418
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 29

Conread position: 26-444
Cow position:
Alignm length: 431
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 22

Conread position: 26-444
Cow position:
Alignm length: 429
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 26-444
Cow position:
Alignm length: 421
Alignm identity: 265
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 104, 28

Conread position: 26-444
Cow position:
Alignm length: 427
Alignm identity: 284
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 166, 69

Conread position: 26-444
Cow position:
Alignm length: 423
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 170

Conread position: 26-445
Cow position:
Alignm length: 426
Alignm identity: 296
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 99, 34

Conread position: 26-447
Cow position:
Alignm length: 432
Alignm identity: 279
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 97

Conread position: 26-447
Cow position:
Alignm length: 433
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 292

Conread position: 26-448
Cow position:
Alignm length: 433
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 358

Conread position: 26-480
Cow position:
Alignm length: 468
Alignm identity: 305
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 98, 36

Conread position: 26-485
Cow position:
Alignm length: 478
Alignm identity: 317
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 172, 85

Conread position: 26-746
Cow position:
Alignm length: 738
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 302

Conread position: 26-746
Cow position:
Alignm length: 733
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 37

Conread position: 26-757
Cow position:
Alignm length: 750
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 292

Conread position: 26-759
Cow position:
Alignm length: 750
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 73

Conread position: 26-760
Cow position:
Alignm length: 752
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 283

Conread position: 26-760
Cow position:
Alignm length: 770
Alignm identity: 482
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 98, 24

Conread position: 26-760
Cow position:
Alignm length: 753
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 126

Conread position: 26-760
Cow position:
Alignm length: 752
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 441

Conread position: 26-760
Cow position:
Alignm length: 752
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 86

Conread position: 26-760
Cow position:
Alignm length: 753
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 369

Conread position: 26-760
Cow position:
Alignm length: 752
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 283

Conread position: 26-760
Cow position:
Alignm length: 751
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 441

Conread position: 26-760
Cow position:
Alignm length: 754
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 56

Conread position: 26-760
Cow position:
Alignm length: 757
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 136

Conread position: 26-760
Cow position:
Alignm length: 756
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 131

Conread position: 26-760
Cow position:
Alignm length: 751
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 124

Conread position: 26-760
Cow position:
Alignm length: 755
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 442

Conread position: 27-382
Cow position:
Alignm length: 365
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 27-447
Cow position:
Alignm length: 436
Alignm identity: 284
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 153, 88

Conread position: 27-477
Cow position:
Alignm length: 462
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 315

Conread position: 27-950
Cow position:
Alignm length: 969
Alignm identity: 635
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 431

Conread position: 28-228
Cow position:
Alignm length: 204
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 93, 123

Conread position: 28-336
Cow position:
Alignm length: 318
Alignm identity: 221
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 96, 34

Conread position: 28-425
Cow position:
Alignm length: 408
Alignm identity: 274
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 89, 117

Conread position: 29-233
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 163, 95

Conread position: 29-294
Cow position:
Alignm length: 282
Alignm identity: 196
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 88, 220

Conread position: 31-479
Cow position:
Alignm length: 454
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 64

Conread position: 31-1224
Cow position:
Alignm length: 1239
Alignm identity: 793
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 23

Conread position: 32-409
Cow position:
Alignm length: 383
Alignm identity: 248
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 98, 199

Conread position: 32-444
Cow position:
Alignm length: 426
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 340

Conread position: 32-447
Cow position:
Alignm length: 431
Alignm identity: 290
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 76, 282

Conread position: 33-230
Cow position:
Alignm length: 203
Alignm identity: 151
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 82, 177

Conread position: 33-444
Cow position:
Alignm length: 424
Alignm identity: 284
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 91, 42

Conread position: 35-368
Cow position:
Alignm length: 349
Alignm identity: 234
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 84, 152

Conread position: 37-379
Cow position:
Alignm length: 353
Alignm identity: 227
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 93, 43

Conread position: 40-447
Cow position:
Alignm length: 423
Alignm identity: 272
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 153, 84

Conread position: 42-384
Cow position:
Alignm length: 344
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 108

Conread position: 43-426
Cow position:
Alignm length: 387
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 189

Conread position: 62-332
Cow position:
Alignm length: 278
Alignm identity: 200
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 127, 62

Conread position: 62-365
Cow position:
Alignm length: 313
Alignm identity: 217
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 62, 90

Conread position: 62-381
Cow position:
Alignm length: 330
Alignm identity: 215
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 62, 274

Conread position: 62-433
Cow position:
Alignm length: 387
Alignm identity: 248
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 62, 251

Conread position: 62-434
Cow position:
Alignm length: 384
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 62-775
Cow position:
Alignm length: 725
Alignm identity: 280
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 59, 90

Conread position: 67-382
Cow position:
Alignm length: 325
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 5

Conread position: 68-320
Cow position:
Alignm length: 255
Alignm identity: 170
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 124, 55

Conread position: 72-368
Cow position:
Alignm length: 307
Alignm identity: 204
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 72-418
Cow position:
Alignm length: 355
Alignm identity: 231
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 159, 78

Conread position: 73-481
Cow position:
Alignm length: 421
Alignm identity: 266
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 119, 40

Conread position: 74-444
Cow position:
Alignm length: 387
Alignm identity: 262
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 47, 246

Conread position: 77-364
Cow position:
Alignm length: 304
Alignm identity: 204
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 63

Conread position: 78-368
Cow position:
Alignm length: 295
Alignm identity: 210
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 11, 82

Conread position: 78-426
Cow position:
Alignm length: 359
Alignm identity: 242
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 39, 95

Conread position: 82-435
Cow position:
Alignm length: 358
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 106

Conread position: 85-327
Cow position:
Alignm length: 247
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 105, 24

Conread position: 91-760
Cow position:
Alignm length: 690
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 5

Conread position: 94-466
Cow position:
Alignm length: 381
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 59

Conread position: 96-760
Cow position:
Alignm length: 680
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 56

Conread position: 100-463
Cow position:
Alignm length: 373
Alignm identity: 240
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 92, 27

Conread position: 102-447
Cow position:
Alignm length: 367
Alignm identity: 238
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 238

Conread position: 108-402
Cow position:
Alignm length: 307
Alignm identity: 203
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 14, 51

Conread position: 108-415
Cow position:
Alignm length: 310
Alignm identity: 213
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 16, 57

Conread position: 111-444
Cow position:
Alignm length: 341
Alignm identity: 237
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 5, 267

Conread position: 113-656
Cow position:
Alignm length: 553
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 352

Conread position: 115-399
Cow position:
Alignm length: 289
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 77, 39

Conread position: 115-443
Cow position:
Alignm length: 345
Alignm identity: 231
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 11, 37

Conread position: 117-435
Cow position:
Alignm length: 325
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 182

Conread position: 120-479
Cow position:
Alignm length: 361
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 25

Conread position: 120-479
Cow position:
Alignm length: 364
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 177

Conread position: 121-514
Cow position:
Alignm length: 403
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 53

Conread position: 123-444
Cow position:
Alignm length: 334
Alignm identity: 223
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 69, 22

Conread position: 125-484
Cow position:
Alignm length: 369
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 61

Conread position: 128-435
Cow position:
Alignm length: 316
Alignm identity: 211
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 64, 17

Conread position: 130-379
Cow position:
Alignm length: 257
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 133-330
Cow position:
Alignm length: 201
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 135-481
Cow position:
Alignm length: 355
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 330

Conread position: 138-736
Cow position:
Alignm length: 613
Alignm identity: 393
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 61

Conread position: 139-677
Cow position:
Alignm length: 548
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 26

Conread position: 141-419
Cow position:
Alignm length: 288
Alignm identity: 199
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 53, 213

Conread position: 146-480
Cow position:
Alignm length: 351
Alignm identity: 232
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 47, 184

Conread position: 146-760
Cow position:
Alignm length: 631
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 319

Conread position: 147-425
Cow position:
Alignm length: 279
Alignm identity: 193
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 150-399
Cow position:
Alignm length: 260
Alignm identity: 174
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 17, 137

Conread position: 151-447
Cow position:
Alignm length: 305
Alignm identity: 199
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 41, 213

Conread position: 151-458
Cow position:
Alignm length: 317
Alignm identity: 215
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 41, 144

Conread position: 151-466
Cow position:
Alignm length: 322
Alignm identity: 227
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 126, 15

Conread position: 154-479
Cow position:
Alignm length: 335
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 179

Conread position: 162-759
Cow position:
Alignm length: 614
Alignm identity: 391
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 30, 109

Conread position: 171-373
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 21, 0

Conread position: 181-723
Cow position:
Alignm length: 550
Alignm identity: 360
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 40, 5

Conread position: 182-1169
Cow position:
Alignm length: 1046
Alignm identity: 654
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 24, 10

Conread position: 189-475
Cow position:
Alignm length: 297
Alignm identity: 201
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 28, 49

Conread position: 190-952
Cow position:
Alignm length: 799
Alignm identity: 494
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 30, 251

Conread position: 191-435
Cow position:
Alignm length: 251
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 6

Conread position: 197-645
Cow position:
Alignm length: 458
Alignm identity: 288
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 27, 53

Conread position: 198-760
Cow position:
Alignm length: 576
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 122

Conread position: 209-397
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 28

Conread position: 218-728
Cow position:
Alignm length: 518
Alignm identity: 332
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 170, 17

Conread position: 222-381
Cow position:
Alignm length: 160
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 222-435
Cow position:
Alignm length: 214
Alignm identity: 147
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 222-442
Cow position:
Alignm length: 222
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 167, 40

Conread position: 222-445
Cow position:
Alignm length: 236
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 222-478
Cow position:
Alignm length: 258
Alignm identity: 175
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 167, 0

Conread position: 222-480
Cow position:
Alignm length: 261
Alignm identity: 193
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 81, 36

Conread position: 222-685
Cow position:
Alignm length: 472
Alignm identity: 312
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 166, 106

Conread position: 222-760
Cow position:
Alignm length: 549
Alignm identity: 336
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 81, 207

Conread position: 222-760
Cow position:
Alignm length: 552
Alignm identity: 358
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 28, 76

Conread position: 222-760
Cow position:
Alignm length: 552
Alignm identity: 344
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 88, 78

Conread position: 222-760
Cow position:
Alignm length: 550
Alignm identity: 357
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 166, 65

Conread position: 225-419
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 163, 56

Conread position: 225-481
Cow position:
Alignm length: 261
Alignm identity: 172
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 164, 235

Conread position: 227-447
Cow position:
Alignm length: 222
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 162, 0

Conread position: 227-479
Cow position:
Alignm length: 257
Alignm identity: 175
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 131, 194

Conread position: 227-740
Cow position:
Alignm length: 525
Alignm identity: 328
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 36

Conread position: 227-763
Cow position:
Alignm length: 545
Alignm identity: 341
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 162, 22

Conread position: 228-480
Cow position:
Alignm length: 257
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 91

Conread position: 228-762
Cow position:
Alignm length: 546
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 226

Conread position: 228-783
Cow position:
Alignm length: 566
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 230

Conread position: 240-444
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 165, 139

Conread position: 242-760
Cow position:
Alignm length: 527
Alignm identity: 342
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 147, 162

Conread position: 242-760
Cow position:
Alignm length: 527
Alignm identity: 340
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 147, 44

Conread position: 245-461
Cow position:
Alignm length: 217
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 248-436
Cow position:
Alignm length: 190
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 140, 52

Conread position: 260-446
Cow position:
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 128, 0

Conread position: 261-818
Cow position:
Alignm length: 582
Alignm identity: 372
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 109, 9

Conread position: 263-760
Cow position:
Alignm length: 506
Alignm identity: 325
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 126, 195

Conread position: 268-680
Cow position:
Alignm length: 420
Alignm identity: 254
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 180, 143

Conread position: 273-479
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 173, 19

Conread position: 293-757
Cow position:
Alignm length: 473
Alignm identity: 304
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 96, 143

Conread position: 296-479
Cow position:
Alignm length: 190
Alignm identity: 144
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 37, 6

Conread position: 358-760
Cow position:
Alignm length: 411
Alignm identity: 265
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 100

Conread position: 479-750
Cow position:
Alignm length: 285
Alignm identity: 194
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 30, 143

Conread position: 495-733
Cow position:
Alignm length: 243
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 107

Conread position: 495-759
Cow position:
Alignm length: 271
Alignm identity: 195
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 57, 36

Conread position: 497-760
Cow position:
Alignm length: 273
Alignm identity: 179
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 526-680
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 51

Conread position: 530-740
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 169

Conread position: 535-783
Cow position:
Alignm length: 258
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 239

Conread position: 537-760
Cow position:
Alignm length: 232
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 134

Conread position: 537-760
Cow position:
Alignm length: 232
Alignm identity: 156
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 16, 134

Conread position: 537-760
Cow position:
Alignm length: 232
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 134

Conread position: 551-746
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 112, 103

Conread position: 551-760
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 39

Conread position: 551-760
Cow position:
Alignm length: 218
Alignm identity: 150
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 17, 119

Conread position: 551-760
Cow position:
Alignm length: 218
Alignm identity: 150
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 17, 119

Conread position: 551-783
Cow position:
Alignm length: 241
Alignm identity: 160
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 17, 216

Conread position: 555-1224
Cow position:
Alignm length: 703
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 55

Conread position: 774-1085
Cow position:
Alignm length: 324
Alignm identity: 210
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 97

Conread position: 839-1207
Cow position:
Alignm length: 395
Alignm identity: 270
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 77

Conread position: 844-1170
Cow position:
Alignm length: 343
Alignm identity: 228
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 9, 24

Conread position: 878-1224
Cow position:
Alignm length: 372
Alignm identity: 252
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 11, 33

Conread position: 883-1224
Cow position:
Alignm length: 368
Alignm identity: 248
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 35, 179

Conread position: 884-1135
Cow position:
Alignm length: 257
Alignm identity: 175
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 83, 26

Conread position: 887-1168
Cow position:
Alignm length: 299
Alignm identity: 200
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 121

Conread position: 887-1224
Cow position:
Alignm length: 350
Alignm identity: 230
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 80, 47

Conread position: 888-1224
Cow position:
Alignm length: 355
Alignm identity: 250
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 17, 23

Conread position: 888-1224
Cow position:
Alignm length: 357
Alignm identity: 236
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 68, 192

Conread position: 949-1224
Cow position:
Alignm length: 285
Alignm identity: 195
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 188, 35

Conread position: 961-1224
Cow position:
Alignm length: 273
Alignm identity: 186
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 69, 9

Conread position: 964-1170
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 76, 18

Conread position: 984-1224
Cow position:
Alignm length: 254
Alignm identity: 171
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 76, 119

Show alignments to all cow chromosomes.