Cow genome map


           Conread name:
           Ss1.1-rplun0112_o20.5
        

               Conread position:
               172-458
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               12, 41
               

               Conread position:
               177-745
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 52
               

               Conread position:
               211-755
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 19
               

               Conread position:
               229-661
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 18
               

               Conread position:
               232-396
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               146, 67
               

               Conread position:
               232-500
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 68
               

               Conread position:
               232-750
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 13
               

               Conread position:
               250-754
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 28
               

               Conread position:
               270-601
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 29
               

               Conread position:
               273-411
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               104, 26
               

               Conread position:
               273-499
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               50, 26
               

               Conread position:
               273-581
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               285, 26
               

               Conread position:
               273-605
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 26
               

               Conread position:
               280-503
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               87, 19
               

               Conread position:
               299-741
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 109
               

               Conread position:
               321-588
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               12, 27
               

               Conread position:
               323-551
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               10, 75
               

               Conread position:
               331-729
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 131
               

               Conread position:
               333-742
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 86
               

               Conread position:
               345-506
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               38, 85
               

               Conread position:
               373-588
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               378-710
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 320
               

               Conread position:
               387-570
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               163, 28
               

               Conread position:
               420-604
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               18, 100
               

               Conread position:
               437-662
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               85, 77
               
Show alignments to all cow chromosomes.