Cow genome map
| Conread name: | Ss1.1-rplun0112_o20.5 |
| Conread position: | 172-755 |
| Cow position: | chr14:36647468-36646882 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 125 |
| Conread position: | 177-755 |
| Cow position: | chr14:38341226-38340641 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 81 |
| Conread position: | 180-500 |
| Cow position: | chr14:24593818-24594133 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 226 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 50, 67 |
| Conread position: | 187-483 |
| Cow position: | chr14:26141554-26141863 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 39, 46 |
| Conread position: | 203-689 |
| Cow position: | chr14:26476866-26477367 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 111 |
| Conread position: | 205-357 |
| Cow position: | chr14:40351724-40351575 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 83, 12 |
| Conread position: | 205-605 |
| Cow position: | chr14:38339590-38339181 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 89 |
| Conread position: | 212-573 |
| Cow position: | chr14:37773289-37772932 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 20 |
| Conread position: | 220-698 |
| Cow position: | chr14:3067248-3066758 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 79 |
| Conread position: | 232-609 |
| Cow position: | chr14:27297106-27296748 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 232-695 |
| Cow position: | chr14:26155547-26156015 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 67 |
| Conread position: | 232-747 |
| Cow position: | chr14:29235051-29234551 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 6 |
| Conread position: | 232-750 |
| Cow position: | chr14:45499836-45500340 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 67 |
| Conread position: | 233-375 |
| Cow position: | chr14:8197031-8197171 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 251-754 |
| Cow position: | chr14:38124563-38125044 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 48 |
| Conread position: | 263-550 |
| Cow position: | chr14:37449711-37449424 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 38 |
| Conread position: | 270-605 |
| Cow position: | chr14:20453400-20453054 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 29 |
| Conread position: | 270-755 |
| Cow position: | chr14:12469240-12469710 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 26 |
| Conread position: | 270-755 |
| Cow position: | chr14:45795869-45795396 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 29 |
| Conread position: | 273-379 |
| Cow position: | chr14:37746918-37746814 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 273-494 |
| Cow position: | chr14:30934359-30934133 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 94, 26 |
| Conread position: | 273-503 |
| Cow position: | chr14:13222450-13222684 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 102, 26 |
| Conread position: | 275-503 |
| Cow position: | chr14:32148953-32148716 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 45, 21 |
| Conread position: | 284-554 |
| Cow position: | chr14:37036859-37037133 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 15 |
| Conread position: | 311-755 |
| Cow position: | chr14:13395401-13394968 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 210 |
| Conread position: | 321-755 |
| Cow position: | chr14:13526496-13526936 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 30 |
| Conread position: | 380-729 |
| Cow position: | chr14:38338968-38338614 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 157 |
| Conread position: | 381-756 |
| Cow position: | chr14:26624154-26623774 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 34 |
| Conread position: | 387-755 |
| Cow position: | chr14:2271319-2271689 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 170 |
| Conread position: | 420-755 |
| Cow position: | chr14:20488317-20487969 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 238 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 429-643 |
| Cow position: | chr14:30139779-30139997 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 12 |
| Conread position: | 431-605 |
| Cow position: | chr14:14486659-14486486 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 20, 31 |
| Conread position: | 435-751 |
| Cow position: | chr14:40061811-40061488 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 111, 146 |
| Conread position: | 440-601 |
| Cow position: | chr14:35120474-35120314 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 482-755 |
| Cow position: | chr14:40350422-40350143 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 495-698 |
| Cow position: | chr14:40876604-40876407 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 539-755 |
| Cow position: | chr14:37449201-37448980 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 63, 53 |
Show alignments to all cow chromosomes.