Cow genome map


           Conread name:
           Ss1.1-rplun0112_o20.5
        

               Conread position:
               187-601
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 73
               

               Conread position:
               203-412
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               17, 96
               

               Conread position:
               205-756
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 105
               

               Conread position:
               207-580
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 52
               

               Conread position:
               212-642
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 18
               

               Conread position:
               212-708
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 16
               

               Conread position:
               231-414
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               68, 16
               

               Conread position:
               231-470
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               46, 68
               

               Conread position:
               231-756
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 68
               

               Conread position:
               232-449
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               164, 46
               

               Conread position:
               241-605
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               263-458
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               114, 36
               

               Conread position:
               263-631
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 36
               

               Conread position:
               273-422
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               81, 26
               

               Conread position:
               273-503
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               101, 27
               

               Conread position:
               299-583
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               34, 14
               

               Conread position:
               300-755
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 17
               

               Conread position:
               313-756
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 6
               

               Conread position:
               321-581
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               321-755
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 10
               

               Conread position:
               350-708
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 303
               

               Conread position:
               353-755
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               250, 54
               

               Conread position:
               370-707
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               163, 209
               

               Conread position:
               372-740
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 188
               

               Conread position:
               376-755
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 37
               

               Conread position:
               426-756
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 87
               

               Conread position:
               430-605
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               21, 77
               

               Conread position:
               437-556
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               437-755
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               243
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               62, 11
               

               Conread position:
               440-755
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 276
               

               Conread position:
               443-755
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               10, 112
               

               Conread position:
               481-755
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               13, 239
               

               Conread position:
               503-752
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               108, 86
               

               Conread position:
               538-755
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               547-755
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               58, 152
               

               Conread position:
               558-755
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               34, 155
               

               Conread position:
               570-754
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               37, 142
               

               Conread position:
               612-756
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.