Cow genome map

Conread name: Ss1.1-rplun0112_o20.5

Conread position: 187-467
Cow position:
Alignm length: 296
Alignm identity: 209
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 43, 73

Conread position: 187-605
Cow position:
Alignm length: 432
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 55

Conread position: 187-707
Cow position:
Alignm length: 536
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 60

Conread position: 217-390
Cow position:
Alignm length: 174
Alignm identity: 134
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 227-655
Cow position:
Alignm length: 439
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 72

Conread position: 229-465
Cow position:
Alignm length: 243
Alignm identity: 174
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 148, 69

Conread position: 231-436
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 150, 68

Conread position: 231-756
Cow position:
Alignm length: 549
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 33

Conread position: 232-378
Cow position:
Alignm length: 147
Alignm identity: 120
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 67, 0

Conread position: 232-542
Cow position:
Alignm length: 315
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 69

Conread position: 232-548
Cow position:
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 67

Conread position: 232-548
Cow position:
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 67

Conread position: 233-638
Cow position:
Alignm length: 418
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 29

Conread position: 242-391
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 9, 58

Conread position: 249-603
Cow position:
Alignm length: 360
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 50

Conread position: 250-411
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 131, 49

Conread position: 250-745
Cow position:
Alignm length: 517
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 49

Conread position: 250-755
Cow position:
Alignm length: 511
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 49

Conread position: 251-650
Cow position:
Alignm length: 402
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 48

Conread position: 259-498
Cow position:
Alignm length: 246
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 41

Conread position: 270-601
Cow position:
Alignm length: 342
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 29

Conread position: 273-487
Cow position:
Alignm length: 225
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 97, 26

Conread position: 273-503
Cow position:
Alignm length: 240
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 101, 26

Conread position: 273-507
Cow position:
Alignm length: 244
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 26

Conread position: 273-755
Cow position:
Alignm length: 492
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 23

Conread position: 275-503
Cow position:
Alignm length: 238
Alignm identity: 162
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 24

Conread position: 275-557
Cow position:
Alignm length: 296
Alignm identity: 211
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 99, 24

Conread position: 285-591
Cow position:
Alignm length: 313
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 14

Conread position: 321-698
Cow position:
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 11

Conread position: 322-554
Cow position:
Alignm length: 234
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 192, 12

Conread position: 336-755
Cow position:
Alignm length: 426
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 17

Conread position: 342-496
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 345-745
Cow position:
Alignm length: 409
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 72

Conread position: 347-555
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 357-591
Cow position:
Alignm length: 240
Alignm identity: 169
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 21, 167

Conread position: 370-610
Cow position:
Alignm length: 243
Alignm identity: 184
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 68, 45

Conread position: 370-755
Cow position:
Alignm length: 391
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 45

Conread position: 370-755
Cow position:
Alignm length: 388
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 239

Conread position: 378-557
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 63, 18

Conread position: 421-604
Cow position:
Alignm length: 184
Alignm identity: 144
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 26, 0

Conread position: 433-755
Cow position:
Alignm length: 324
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 275

Conread position: 437-602
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 127, 0

Conread position: 437-755
Cow position:
Alignm length: 326
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 102

Conread position: 438-755
Cow position:
Alignm length: 325
Alignm identity: 224
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 53, 132

Conread position: 459-755
Cow position:
Alignm length: 299
Alignm identity: 206
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 121, 72

Conread position: 487-755
Cow position:
Alignm length: 269
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 488-709
Cow position:
Alignm length: 226
Alignm identity: 168
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 118, 69

Conread position: 606-755
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 612-755
Cow position:
Alignm length: 144
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.