Cow genome map

Conread name: Ss1.1-rplun0112_o20.5

Conread position: 187-372
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 73

Conread position: 187-372
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 43, 60

Conread position: 205-476
Cow position:
Alignm length: 277
Alignm identity: 203
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 15, 28

Conread position: 206-360
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 14, 27

Conread position: 231-503
Cow position:
Alignm length: 276
Alignm identity: 195
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 220, 68

Conread position: 231-576
Cow position:
Alignm length: 347
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 40

Conread position: 232-379
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 232-412
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 147, 68

Conread position: 232-484
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 219, 10

Conread position: 232-755
Cow position:
Alignm length: 532
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 67

Conread position: 233-463
Cow position:
Alignm length: 233
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 33

Conread position: 235-411
Cow position:
Alignm length: 177
Alignm identity: 137
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 235-570
Cow position:
Alignm length: 337
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 62

Conread position: 247-413
Cow position:
Alignm length: 167
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 250-641
Cow position:
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 49

Conread position: 253-413
Cow position:
Alignm length: 165
Alignm identity: 133
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 126, 46

Conread position: 273-503
Cow position:
Alignm length: 239
Alignm identity: 168
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 102, 26

Conread position: 278-473
Cow position:
Alignm length: 196
Alignm identity: 145
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 23, 0

Conread position: 289-755
Cow position:
Alignm length: 476
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 12

Conread position: 309-695
Cow position:
Alignm length: 394
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 104

Conread position: 321-755
Cow position:
Alignm length: 439
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 13

Conread position: 322-752
Cow position:
Alignm length: 442
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 94

Conread position: 356-752
Cow position:
Alignm length: 407
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 63

Conread position: 370-518
Cow position:
Alignm length: 151
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 129, 44

Conread position: 370-548
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 49, 0

Conread position: 376-531
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 42, 143

Conread position: 380-576
Cow position:
Alignm length: 198
Alignm identity: 151
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 147, 41

Conread position: 387-581
Cow position:
Alignm length: 196
Alignm identity: 147
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 126, 28

Conread position: 443-600
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 115, 121

Conread position: 467-755
Cow position:
Alignm length: 300
Alignm identity: 210
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 51, 14

Conread position: 470-599
Cow position:
Alignm length: 130
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 475-698
Cow position:
Alignm length: 230
Alignm identity: 159
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 129, 175

Conread position: 475-755
Cow position:
Alignm length: 284
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 146

Conread position: 496-755
Cow position:
Alignm length: 264
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 111, 10

Conread position: 503-755
Cow position:
Alignm length: 258
Alignm identity: 175
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 14, 47

Conread position: 555-750
Cow position:
Alignm length: 200
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 158

Conread position: 566-755
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 29, 0

Show alignments to all cow chromosomes.