Cow genome map

Conread name: Ss1.1-rplun0112_o20.5

Conread position: 180-755
Cow position:
Alignm length: 599
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 131

Conread position: 181-487
Cow position:
Alignm length: 308
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 65

Conread position: 187-482
Cow position:
Alignm length: 308
Alignm identity: 213
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 73

Conread position: 187-707
Cow position:
Alignm length: 529
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 79

Conread position: 187-707
Cow position:
Alignm length: 529
Alignm identity: 350
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 43, 79

Conread position: 187-756
Cow position:
Alignm length: 594
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 124

Conread position: 198-471
Cow position:
Alignm length: 283
Alignm identity: 208
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 61, 18

Conread position: 200-755
Cow position:
Alignm length: 572
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 108

Conread position: 205-387
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 42, 104

Conread position: 205-396
Cow position:
Alignm length: 203
Alignm identity: 150
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 108

Conread position: 205-605
Cow position:
Alignm length: 412
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 42

Conread position: 216-756
Cow position:
Alignm length: 547
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 85

Conread position: 231-435
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 96, 68

Conread position: 231-514
Cow position:
Alignm length: 289
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 43

Conread position: 232-367
Cow position:
Alignm length: 136
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 232-368
Cow position:
Alignm length: 137
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 232-553
Cow position:
Alignm length: 328
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 34

Conread position: 232-642
Cow position:
Alignm length: 415
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 68

Conread position: 232-754
Cow position:
Alignm length: 533
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 68

Conread position: 237-375
Cow position:
Alignm length: 139
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 240-451
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 248-469
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 54, 0

Conread position: 250-448
Cow position:
Alignm length: 203
Alignm identity: 151
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 121, 49

Conread position: 250-746
Cow position:
Alignm length: 510
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 49

Conread position: 263-549
Cow position:
Alignm length: 299
Alignm identity: 209
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 211, 36

Conread position: 270-755
Cow position:
Alignm length: 493
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 29

Conread position: 275-601
Cow position:
Alignm length: 338
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 24

Conread position: 286-755
Cow position:
Alignm length: 477
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 13

Conread position: 291-755
Cow position:
Alignm length: 469
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 5

Conread position: 298-422
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 298-601
Cow position:
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 48

Conread position: 321-755
Cow position:
Alignm length: 442
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 11

Conread position: 351-479
Cow position:
Alignm length: 133
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 354-600
Cow position:
Alignm length: 252
Alignm identity: 184
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 27, 65

Conread position: 366-752
Cow position:
Alignm length: 395
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 104

Conread position: 373-755
Cow position:
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 35

Conread position: 387-603
Cow position:
Alignm length: 218
Alignm identity: 167
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 112, 28

Conread position: 396-554
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 417-698
Cow position:
Alignm length: 286
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 90

Conread position: 426-626
Cow position:
Alignm length: 206
Alignm identity: 152
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 88, 11

Conread position: 444-636
Cow position:
Alignm length: 197
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 163, 51

Conread position: 459-603
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 55, 59

Conread position: 461-755
Cow position:
Alignm length: 299
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 191

Conread position: 493-755
Cow position:
Alignm length: 267
Alignm identity: 196
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 113, 24

Conread position: 502-702
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 102, 128

Conread position: 570-755
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 38, 59

Conread position: 577-755
Cow position:
Alignm length: 182
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 98, 0

Show alignments to all cow chromosomes.