Cow genome map


           Conread name:
           Ss1.1-rplun0112_o20.5
        

               Conread position:
               172-686
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 37
               

               Conread position:
               180-601
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               295
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               187-591
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 73
               

               Conread position:
               194-506
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               36, 54
               

               Conread position:
               202-441
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               175, 7
               

               Conread position:
               203-471
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 97
               

               Conread position:
               205-485
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               25, 56
               

               Conread position:
               212-451
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               8, 16
               

               Conread position:
               216-604
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 60
               

               Conread position:
               231-397
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 70
               

               Conread position:
               232-412
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               147, 67
               

               Conread position:
               232-422
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               103, 23
               

               Conread position:
               232-490
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               159, 72
               

               Conread position:
               232-550
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 34
               

               Conread position:
               232-752
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 69
               

               Conread position:
               236-568
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               237-752
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 62
               

               Conread position:
               240-447
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               137, 26
               

               Conread position:
               241-412
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               136, 58
               

               Conread position:
               263-578
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 36
               

               Conread position:
               267-755
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 29
               

               Conread position:
               270-512
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               113, 29
               

               Conread position:
               270-586
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 29
               

               Conread position:
               270-605
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               146, 29
               

               Conread position:
               273-499
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               113, 26
               

               Conread position:
               273-504
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               97, 26
               

               Conread position:
               287-503
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               55, 12
               

               Conread position:
               298-489
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               299-728
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 35
               

               Conread position:
               299-752
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               308
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               88, 8
               

               Conread position:
               305-411
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               313-577
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               24, 205
               

               Conread position:
               313-604
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               216
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               20, 93
               

               Conread position:
               313-752
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 103
               

               Conread position:
               321-753
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               288
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               26, 33
               

               Conread position:
               322-753
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               306
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               30, 12
               

               Conread position:
               323-603
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 11
               

               Conread position:
               323-620
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               233
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               58, 83
               

               Conread position:
               335-695
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 82
               

               Conread position:
               335-756
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 147
               

               Conread position:
               336-660
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               234
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               42, 83
               

               Conread position:
               354-709
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 89
               

               Conread position:
               382-687
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               218
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               52, 137
               

               Conread position:
               387-638
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 28
               

               Conread position:
               388-684
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               213
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               188, 60
               

               Conread position:
               416-755
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 136
               

               Conread position:
               431-707
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               437-756
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 69
               

               Conread position:
               441-605
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               72, 77
               

               Conread position:
               445-591
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               445-603
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               78, 68
               

               Conread position:
               456-753
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 207
               

               Conread position:
               468-693
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               138, 113
               

               Conread position:
               472-750
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               50, 135
               

               Conread position:
               552-755
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               54, 149
               

               Conread position:
               553-755
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               53, 39
               

               Conread position:
               557-755
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               49, 146
               

               Conread position:
               570-751
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               595-755
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               119, 0
               
Show alignments to all cow chromosomes.