Cow genome map

Conread name: Ss1.1-rplun0112_o20.5

Conread position: 177-297
Cow position: chr20:36048270-36048390 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 187-601
Cow position: chr20:26425912-26425513 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 60

Conread position: 205-391
Cow position: chr20:681223-681412 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 22, 100

Conread position: 205-743
Cow position: chr20:24148692-24148154 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 109

Conread position: 212-410
Cow position: chr20:27924211-27924410 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 8, 18

Conread position: 232-566
Cow position: chr20:20765558-20765910 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 67

Conread position: 232-752
Cow position: chr20:35724385-35724912 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 30

Conread position: 232-754
Cow position: chr20:17645461-17644977 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 39

Conread position: 258-755
Cow position: chr20:11137938-11138419 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 87

Conread position: 273-504
Cow position: chr20:36713567-36713332 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 101, 26

Conread position: 275-379
Cow position: chr20:16620778-16620881 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 24

Conread position: 286-503
Cow position: chr20:14595320-14595541 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 13

Conread position: 319-755
Cow position: chr20:18388076-18387642 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 12

Conread position: 321-583
Cow position: chr20:9939489-9939749 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 149, 13

Conread position: 337-755
Cow position: chr20:10993100-10993519 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 78

Conread position: 342-526
Cow position: chr20:38413903-38413715 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 346-694
Cow position: chr20:42738103-42737759 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 69

Conread position: 348-756
Cow position: chr20:31449673-31450088 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 8

Conread position: 350-690
Cow position: chr20:31441582-31441231 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 207

Conread position: 353-754
Cow position: chr20:9432625-9432230 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 62

Conread position: 371-584
Cow position: chr20:38059885-38059676 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 199, 44

Conread position: 380-755
Cow position: chr20:36657675-36657303 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 35

Conread position: 382-578
Cow position: chr20:36048553-36048742 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 424-698
Cow position: chr20:682763-683043 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 208
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 5, 109

Conread position: 431-638
Cow position: chr20:38062299-38062508 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 173, 27

Conread position: 458-755
Cow position: chr20:42109625-42109912 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 201
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 62

Conread position: 524-707
Cow position: chr20:35255524-35255710 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 64, 59

Conread position: 571-755
Cow position: chr20:20766217-20766404 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 72

Show alignments to all cow chromosomes.