Cow genome map

Conread name: Ss1.1-rplun0112_o20.5

Conread position: 172-379
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 26, 40

Conread position: 176-411
Cow position:
Alignm length: 241
Alignm identity: 175
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 66, 52

Conread position: 187-471
Cow position:
Alignm length: 304
Alignm identity: 210
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 187-539
Cow position:
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 74

Conread position: 187-571
Cow position:
Alignm length: 391
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 72

Conread position: 187-601
Cow position:
Alignm length: 425
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 60

Conread position: 187-755
Cow position:
Alignm length: 574
Alignm identity: 375
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 43, 24

Conread position: 203-490
Cow position:
Alignm length: 300
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 108

Conread position: 205-755
Cow position:
Alignm length: 560
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 42

Conread position: 207-755
Cow position:
Alignm length: 553
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 397, 21

Conread position: 212-511
Cow position:
Alignm length: 309
Alignm identity: 224
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 8, 17

Conread position: 231-410
Cow position:
Alignm length: 184
Alignm identity: 145
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 150, 68

Conread position: 231-477
Cow position:
Alignm length: 250
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 68

Conread position: 232-374
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 232-447
Cow position:
Alignm length: 220
Alignm identity: 159
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 145, 65

Conread position: 233-410
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 233-554
Cow position:
Alignm length: 327
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 66

Conread position: 233-581
Cow position:
Alignm length: 355
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 66

Conread position: 249-405
Cow position:
Alignm length: 161
Alignm identity: 125
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 128, 50

Conread position: 249-594
Cow position:
Alignm length: 350
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 50

Conread position: 263-448
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 165, 37

Conread position: 270-542
Cow position:
Alignm length: 287
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 32

Conread position: 273-507
Cow position:
Alignm length: 244
Alignm identity: 166
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 94, 26

Conread position: 273-753
Cow position:
Alignm length: 486
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 26

Conread position: 286-755
Cow position:
Alignm length: 477
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 10

Conread position: 295-449
Cow position:
Alignm length: 157
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 301-755
Cow position:
Alignm length: 464
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 60

Conread position: 309-755
Cow position:
Alignm length: 455
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 11

Conread position: 313-700
Cow position:
Alignm length: 404
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 7

Conread position: 332-752
Cow position:
Alignm length: 426
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 85

Conread position: 335-575
Cow position:
Alignm length: 246
Alignm identity: 187
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 43, 17

Conread position: 345-643
Cow position:
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 175

Conread position: 356-756
Cow position:
Alignm length: 406
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 215

Conread position: 360-752
Cow position:
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 55

Conread position: 361-755
Cow position:
Alignm length: 400
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 57

Conread position: 365-555
Cow position:
Alignm length: 195
Alignm identity: 144
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 14, 0

Conread position: 370-590
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 29, 33

Conread position: 380-752
Cow position:
Alignm length: 379
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 106

Conread position: 387-755
Cow position:
Alignm length: 372
Alignm identity: 255
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 216, 28

Conread position: 419-695
Cow position:
Alignm length: 283
Alignm identity: 205
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 32, 137

Conread position: 419-755
Cow position:
Alignm length: 339
Alignm identity: 231
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 19, 57

Conread position: 421-755
Cow position:
Alignm length: 341
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 70

Conread position: 427-753
Cow position:
Alignm length: 330
Alignm identity: 225
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 163, 268

Conread position: 443-633
Cow position:
Alignm length: 196
Alignm identity: 150
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 8, 108

Conread position: 447-755
Cow position:
Alignm length: 310
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 449-664
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 157, 59

Conread position: 472-755
Cow position:
Alignm length: 289
Alignm identity: 201
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 136, 81

Conread position: 472-755
Cow position:
Alignm length: 286
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 52

Conread position: 481-605
Cow position:
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 37

Conread position: 504-755
Cow position:
Alignm length: 253
Alignm identity: 172
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 100, 13

Conread position: 632-755
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 118, 0

Show alignments to all cow chromosomes.