Cow genome map
| Conread name: | Ss1.1-rplun0112_o20.5 |
| Conread position: | 172-513 |
| Cow position: | chr22:47684288-47684625 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 12, 50 |
| Conread position: | 202-754 |
| Cow position: | chr22:4338659-4338112 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 26 |
| Conread position: | 232-375 |
| Cow position: | chr22:12964952-12964812 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 232-427 |
| Cow position: | chr22:26349605-26349409 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 149, 69 |
| Conread position: | 232-698 |
| Cow position: | chr22:31222379-31221906 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 68 |
| Conread position: | 262-706 |
| Cow position: | chr22:41959485-41959927 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 37 |
| Conread position: | 263-563 |
| Cow position: | chr22:12363772-12363470 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 36 |
| Conread position: | 270-601 |
| Cow position: | chr22:21237247-21236910 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 29 |
| Conread position: | 313-557 |
| Cow position: | chr22:36529960-36530207 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 7, 22 |
| Conread position: | 313-584 |
| Cow position: | chr22:22581763-22581491 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 20, 198 |
| Conread position: | 321-581 |
| Cow position: | chr22:36596947-36597202 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 322-603 |
| Cow position: | chr22:18858300-18858024 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 59, 12 |
| Conread position: | 364-745 |
| Cow position: | chr22:26145467-26145851 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 54 |
| Conread position: | 378-601 |
| Cow position: | chr22:45000003-45000217 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 40, 28 |
| Conread position: | 385-755 |
| Cow position: | chr22:35537308-35537681 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 30 |
| Conread position: | 430-754 |
| Cow position: | chr22:4018973-4018653 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 64 |
| Conread position: | 468-755 |
| Cow position: | chr22:47737259-47736978 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 136, 76 |
| Conread position: | 476-755 |
| Cow position: | chr22:26852783-26853057 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 38, 42 |
| Conread position: | 546-755 |
| Cow position: | chr22:12361575-12361364 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 67, 23 |
Show alignments to all cow chromosomes.