Cow genome map


           Conread name:
           Ss1.1-rplun0112_o20.5
        

               Conread position:
               175-399
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               110, 37
               

               Conread position:
               188-508
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 123
               

               Conread position:
               201-693
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 65
               

               Conread position:
               207-541
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 51
               

               Conread position:
               230-421
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               151, 69
               

               Conread position:
               231-412
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               33, 26
               

               Conread position:
               232-397
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               58, 68
               

               Conread position:
               232-755
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 67
               

               Conread position:
               250-534
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 49
               

               Conread position:
               263-755
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 36
               

               Conread position:
               268-584
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 31
               

               Conread position:
               270-600
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 29
               

               Conread position:
               270-605
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               232, 30
               

               Conread position:
               296-751
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 11
               

               Conread position:
               299-462
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               104, 22
               

               Conread position:
               336-755
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 20
               

               Conread position:
               360-695
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 59
               

               Conread position:
               363-755
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 53
               

               Conread position:
               369-710
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 179
               

               Conread position:
               370-755
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 44
               

               Conread position:
               372-511
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               378-754
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               338, 37
               

               Conread position:
               420-643
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               173
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               184, 98
               

               Conread position:
               440-701
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               152, 231
               

               Conread position:
               570-755
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               36, 143
               

               Conread position:
               587-755
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               18, 83
               
Show alignments to all cow chromosomes.