Cow genome map
| Conread name: | Ss1.1-rplun0112_o20.5 |
| Conread position: | 205-422 |
| Cow position: | chr24:41983649-41983878 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 104 |
| Conread position: | 212-450 |
| Cow position: | chr24:11896153-11895917 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 163, 61 |
| Conread position: | 230-375 |
| Cow position: | chr24:16956337-16956480 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 232-368 |
| Cow position: | chr24:2129323-2129457 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 232-755 |
| Cow position: | chr24:19664813-19664314 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 374, 14 |
| Conread position: | 233-584 |
| Cow position: | chr24:30693590-30693248 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 250-755 |
| Cow position: | chr24:28420247-28420761 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 263 |
| Conread position: | 252-755 |
| Cow position: | chr24:265161-265648 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 269-503 |
| Cow position: | chr24:10273196-10273432 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 105, 30 |
| Conread position: | 270-475 |
| Cow position: | chr24:14495116-14494905 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 95, 31 |
| Conread position: | 273-503 |
| Cow position: | chr24:33072559-33072794 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 101, 26 |
| Conread position: | 273-503 |
| Cow position: | chr24:33902985-33902757 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 113, 26 |
| Conread position: | 301-753 |
| Cow position: | chr24:20990652-20991103 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 119 |
| Conread position: | 309-509 |
| Cow position: | chr24:39166828-39167032 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 68, 110 |
| Conread position: | 321-752 |
| Cow position: | chr24:16874195-16873768 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 285 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 12, 251 |
| Conread position: | 322-601 |
| Cow position: | chr24:19652938-19652659 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 12 |
| Conread position: | 363-755 |
| Cow position: | chr24:16213152-16213542 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 271 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 53, 131 |
| Conread position: | 370-752 |
| Cow position: | chr24:41983884-41984256 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 254 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 236, 26 |
| Conread position: | 378-754 |
| Cow position: | chr24:20261382-20261752 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 37 |
| Conread position: | 426-755 |
| Cow position: | chr24:17541727-17541423 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 440-755 |
| Cow position: | chr24:24658034-24657720 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 58 |
| Conread position: | 576-708 |
| Cow position: | chr24:24571313-24571181 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 603-752 |
| Cow position: | chr24:19652341-19652189 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 49, 0 |
Show alignments to all cow chromosomes.