Cow genome map


           Conread name:
           Ss1.1-rplun0112_o20.5
        

               Conread position:
               175-435
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               77, 63
               

               Conread position:
               177-356
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               177-698
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 122
               

               Conread position:
               231-348
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               231-391
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               31, 69
               

               Conread position:
               263-550
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 36
               

               Conread position:
               263-755
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 36
               

               Conread position:
               270-579
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 31
               

               Conread position:
               300-750
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               305
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               60, 17
               

               Conread position:
               313-750
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 48
               

               Conread position:
               336-603
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 83
               

               Conread position:
               419-581
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               440-561
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               74, 24
               

               Conread position:
               447-601
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               470-755
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               88, 94
               

               Conread position:
               472-756
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               207
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               132, 78
               

               Conread position:
               479-755
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 78
               
Show alignments to all cow chromosomes.