Cow genome map
| Conread name: | Ss1.1-rplun0112_o20.5 |
| Conread position: | 200-601 |
| Cow position: | chr27:30484357-30484761 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 60 |
| Conread position: | 203-755 |
| Cow position: | chr27:25448070-25448618 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 29 |
| Conread position: | 205-488 |
| Cow position: | chr27:13303428-13303149 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 41, 55 |
| Conread position: | 208-450 |
| Cow position: | chr27:22533334-22533093 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 12, 25 |
| Conread position: | 232-754 |
| Cow position: | chr27:29642794-29642290 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 39 |
| Conread position: | 233-424 |
| Cow position: | chr27:26635642-26635835 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 112, 34 |
| Conread position: | 258-421 |
| Cow position: | chr27:26466580-26466415 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 123, 41 |
| Conread position: | 263-755 |
| Cow position: | chr27:11601540-11602047 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 36 |
| Conread position: | 273-391 |
| Cow position: | chr27:6707700-6707816 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 273-498 |
| Cow position: | chr27:13542144-13541915 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 94, 26 |
| Conread position: | 289-755 |
| Cow position: | chr27:29667289-29666816 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 11 |
| Conread position: | 299-755 |
| Cow position: | chr27:30983254-30982805 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 14 |
| Conread position: | 300-581 |
| Cow position: | chr27:20339289-20339010 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 33, 7 |
| Conread position: | 321-603 |
| Cow position: | chr27:25166881-25167162 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 174 |
| Conread position: | 370-756 |
| Cow position: | chr27:26466408-26466025 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 37 |
| Conread position: | 425-605 |
| Cow position: | chr27:13298970-13298792 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 89, 23 |
| Conread position: | 447-752 |
| Cow position: | chr27:13309512-13309215 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 98 |
| Conread position: | 451-755 |
| Cow position: | chr27:22532828-22532533 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 119 |
| Conread position: | 472-709 |
| Cow position: | chr27:21120962-21120722 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 133, 102 |
Show alignments to all cow chromosomes.