Cow genome map
| Conread name: | Ss1.1-rplun0112_o20.5 |
| Conread position: | 177-601 |
| Cow position: | chr28:16529084-16528660 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 71 |
| Conread position: | 189-755 |
| Cow position: | chr28:22005741-22005195 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 31 |
| Conread position: | 205-490 |
| Cow position: | chr28:17338174-17337873 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 43, 105 |
| Conread position: | 232-364 |
| Cow position: | chr28:4254207-4254337 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 232-753 |
| Cow position: | chr28:3679291-3678763 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 55 |
| Conread position: | 232-755 |
| Cow position: | chr28:8639286-8639828 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 67 |
| Conread position: | 249-754 |
| Cow position: | chr28:518476-517965 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 50 |
| Conread position: | 250-754 |
| Cow position: | chr28:8426170-8425684 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 47 |
| Conread position: | 255-412 |
| Cow position: | chr28:1270310-1270152 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 109, 34 |
| Conread position: | 263-575 |
| Cow position: | chr28:20927101-20926790 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 39 |
| Conread position: | 270-531 |
| Cow position: | chr28:22004207-22003935 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 103, 29 |
| Conread position: | 273-503 |
| Cow position: | chr28:15181349-15181117 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 101, 26 |
| Conread position: | 275-499 |
| Cow position: | chr28:514315-514086 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 99, 24 |
| Conread position: | 275-503 |
| Cow position: | chr28:9223040-9223272 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 100, 24 |
| Conread position: | 287-412 |
| Cow position: | chr28:17596013-17595888 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 89, 14 |
| Conread position: | 288-610 |
| Cow position: | chr28:4132341-4132036 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 237 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 93, 13 |
| Conread position: | 370-538 |
| Cow position: | chr28:1270136-1269967 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 28, 21 |
| Conread position: | 371-755 |
| Cow position: | chr28:17595873-17595485 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 45 |
| Conread position: | 397-755 |
| Cow position: | chr28:13413177-13413534 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 121 |
| Conread position: | 467-755 |
| Cow position: | chr28:22806906-22806631 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 193, 111 |
| Conread position: | 475-756 |
| Cow position: | chr28:17337573-17337313 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 83, 88 |
| Conread position: | 498-746 |
| Cow position: | chr28:22837451-22837188 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 16, 20 |
| Conread position: | 540-756 |
| Cow position: | chr28:1269802-1269584 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 74, 175 |
Show alignments to all cow chromosomes.