Cow genome map

Conread name: Ss1.1-rplun0112_o20.5

Conread position: 168-425
Cow position:
Alignm length: 263
Alignm identity: 181
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 52, 15

Conread position: 177-411
Cow position:
Alignm length: 241
Alignm identity: 175
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 53, 44

Conread position: 179-578
Cow position:
Alignm length: 411
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 82

Conread position: 198-610
Cow position:
Alignm length: 415
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 12

Conread position: 205-651
Cow position:
Alignm length: 474
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 106

Conread position: 212-531
Cow position:
Alignm length: 325
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 17

Conread position: 213-447
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 7, 21

Conread position: 229-755
Cow position:
Alignm length: 530
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 70

Conread position: 231-379
Cow position:
Alignm length: 149
Alignm identity: 118
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 68, 0

Conread position: 231-753
Cow position:
Alignm length: 532
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 61

Conread position: 232-394
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 145, 67

Conread position: 232-485
Cow position:
Alignm length: 259
Alignm identity: 191
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 145, 67

Conread position: 232-650
Cow position:
Alignm length: 428
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 186

Conread position: 241-482
Cow position:
Alignm length: 242
Alignm identity: 176
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 58, 0

Conread position: 247-754
Cow position:
Alignm length: 518
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 52

Conread position: 250-565
Cow position:
Alignm length: 323
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 16

Conread position: 250-755
Cow position:
Alignm length: 513
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 50

Conread position: 262-755
Cow position:
Alignm length: 500
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 37

Conread position: 263-411
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 114, 36

Conread position: 270-601
Cow position:
Alignm length: 343
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 29

Conread position: 275-707
Cow position:
Alignm length: 440
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 24

Conread position: 289-560
Cow position:
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 10

Conread position: 298-738
Cow position:
Alignm length: 463
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 8

Conread position: 309-755
Cow position:
Alignm length: 459
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 10

Conread position: 313-699
Cow position:
Alignm length: 398
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 8

Conread position: 340-756
Cow position:
Alignm length: 431
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 80

Conread position: 345-557
Cow position:
Alignm length: 224
Alignm identity: 167
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 25, 117

Conread position: 369-755
Cow position:
Alignm length: 396
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 94

Conread position: 378-755
Cow position:
Alignm length: 384
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 291

Conread position: 381-750
Cow position:
Alignm length: 371
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 195

Conread position: 385-556
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 128, 0

Conread position: 385-755
Cow position:
Alignm length: 379
Alignm identity: 256
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 70, 188

Conread position: 403-756
Cow position:
Alignm length: 359
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 111

Conread position: 417-753
Cow position:
Alignm length: 341
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 419-568
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 419-605
Cow position:
Alignm length: 187
Alignm identity: 145
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 138, 0

Conread position: 419-710
Cow position:
Alignm length: 297
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 135

Conread position: 419-755
Cow position:
Alignm length: 342
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 100

Conread position: 432-756
Cow position:
Alignm length: 331
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 109

Conread position: 433-549
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 48

Conread position: 440-755
Cow position:
Alignm length: 318
Alignm identity: 220
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 54

Conread position: 459-610
Cow position:
Alignm length: 152
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 459-676
Cow position:
Alignm length: 222
Alignm identity: 173
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 53, 59

Conread position: 467-605
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 46, 51

Conread position: 472-689
Cow position:
Alignm length: 224
Alignm identity: 168
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 132, 25

Conread position: 472-749
Cow position:
Alignm length: 283
Alignm identity: 201
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 42, 46

Conread position: 478-738
Cow position:
Alignm length: 273
Alignm identity: 192
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 5, 77

Conread position: 557-756
Cow position:
Alignm length: 200
Alignm identity: 148
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 152, 0

Show alignments to all cow chromosomes.