Cow genome map

Conread name: Ss1.1-rplun0112_o20.5

Conread position: 177-423
Cow position:
Alignm length: 251
Alignm identity: 184
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 204, 120

Conread position: 178-506
Cow position:
Alignm length: 335
Alignm identity: 232
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 54, 83

Conread position: 187-371
Cow position:
Alignm length: 191
Alignm identity: 134
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 118

Conread position: 187-557
Cow position:
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 60

Conread position: 190-403
Cow position:
Alignm length: 218
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 111

Conread position: 190-755
Cow position:
Alignm length: 587
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 121

Conread position: 205-468
Cow position:
Alignm length: 267
Alignm identity: 188
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 42, 97

Conread position: 232-627
Cow position:
Alignm length: 405
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 67

Conread position: 232-650
Cow position:
Alignm length: 427
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 62

Conread position: 232-689
Cow position:
Alignm length: 466
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 67

Conread position: 232-741
Cow position:
Alignm length: 518
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 32

Conread position: 232-755
Cow position:
Alignm length: 527
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 35

Conread position: 250-433
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 250-705
Cow position:
Alignm length: 461
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 49

Conread position: 261-702
Cow position:
Alignm length: 451
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 38

Conread position: 263-478
Cow position:
Alignm length: 219
Alignm identity: 168
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 114, 36

Conread position: 268-469
Cow position:
Alignm length: 202
Alignm identity: 155
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 31, 0

Conread position: 270-554
Cow position:
Alignm length: 294
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 29

Conread position: 270-561
Cow position:
Alignm length: 303
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 29

Conread position: 270-600
Cow position:
Alignm length: 336
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 29

Conread position: 270-601
Cow position:
Alignm length: 342
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 29

Conread position: 273-410
Cow position:
Alignm length: 142
Alignm identity: 114
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 108, 26

Conread position: 273-412
Cow position:
Alignm length: 142
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 104, 26

Conread position: 273-495
Cow position:
Alignm length: 228
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 26

Conread position: 273-496
Cow position:
Alignm length: 228
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 142, 26

Conread position: 275-755
Cow position:
Alignm length: 492
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 24

Conread position: 279-376
Cow position:
Alignm length: 98
Alignm identity: 87
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 299-705
Cow position:
Alignm length: 415
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 100

Conread position: 300-661
Cow position:
Alignm length: 370
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 117

Conread position: 321-755
Cow position:
Alignm length: 444
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 159

Conread position: 321-755
Cow position:
Alignm length: 437
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 17

Conread position: 323-579
Cow position:
Alignm length: 262
Alignm identity: 177
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 10, 48

Conread position: 337-602
Cow position:
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 15

Conread position: 370-604
Cow position:
Alignm length: 238
Alignm identity: 172
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 21, 58

Conread position: 371-554
Cow position:
Alignm length: 184
Alignm identity: 142
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 44, 0

Conread position: 419-752
Cow position:
Alignm length: 339
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 94

Conread position: 426-755
Cow position:
Alignm length: 331
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 92

Conread position: 439-698
Cow position:
Alignm length: 264
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 0

Conread position: 441-750
Cow position:
Alignm length: 311
Alignm identity: 217
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 117, 123

Conread position: 448-755
Cow position:
Alignm length: 314
Alignm identity: 225
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 19, 92

Conread position: 459-710
Cow position:
Alignm length: 258
Alignm identity: 191
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 126, 175

Conread position: 481-755
Cow position:
Alignm length: 279
Alignm identity: 194
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 123, 12

Show alignments to all cow chromosomes.