Cow genome map

Conread name: Ss1.1-rplun0112_o20.5

Conread position: 186-605
Cow position:
Alignm length: 433
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 125

Conread position: 187-755
Cow position:
Alignm length: 580
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 60

Conread position: 200-602
Cow position:
Alignm length: 420
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 17

Conread position: 206-650
Cow position:
Alignm length: 453
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 26

Conread position: 206-710
Cow position:
Alignm length: 524
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 74

Conread position: 229-683
Cow position:
Alignm length: 474
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 72

Conread position: 229-756
Cow position:
Alignm length: 536
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 73

Conread position: 232-391
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 232-605
Cow position:
Alignm length: 378
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 64

Conread position: 250-410
Cow position:
Alignm length: 163
Alignm identity: 130
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 131, 49

Conread position: 250-411
Cow position:
Alignm length: 164
Alignm identity: 136
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 131, 51

Conread position: 250-545
Cow position:
Alignm length: 298
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 49

Conread position: 250-755
Cow position:
Alignm length: 509
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 49

Conread position: 266-483
Cow position:
Alignm length: 224
Alignm identity: 166
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 137, 33

Conread position: 270-601
Cow position:
Alignm length: 342
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 29

Conread position: 270-755
Cow position:
Alignm length: 503
Alignm identity: 345
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 105, 29

Conread position: 273-412
Cow position:
Alignm length: 143
Alignm identity: 121
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 83, 26

Conread position: 273-413
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 120, 28

Conread position: 273-503
Cow position:
Alignm length: 237
Alignm identity: 165
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 101, 26

Conread position: 281-707
Cow position:
Alignm length: 438
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 21

Conread position: 299-561
Cow position:
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 312-755
Cow position:
Alignm length: 454
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 19

Conread position: 321-499
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 14, 37

Conread position: 322-756
Cow position:
Alignm length: 444
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 95

Conread position: 323-755
Cow position:
Alignm length: 443
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 11

Conread position: 337-755
Cow position:
Alignm length: 433
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 45

Conread position: 355-755
Cow position:
Alignm length: 414
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 248

Conread position: 356-603
Cow position:
Alignm length: 254
Alignm identity: 186
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 23, 183

Conread position: 361-709
Cow position:
Alignm length: 358
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 59

Conread position: 370-679
Cow position:
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 44

Conread position: 376-754
Cow position:
Alignm length: 391
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 38

Conread position: 378-707
Cow position:
Alignm length: 335
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 140

Conread position: 387-755
Cow position:
Alignm length: 375
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 132

Conread position: 432-617
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 61

Conread position: 444-754
Cow position:
Alignm length: 314
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 49

Conread position: 472-755
Cow position:
Alignm length: 288
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 45

Conread position: 472-755
Cow position:
Alignm length: 288
Alignm identity: 204
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 126, 82

Conread position: 475-755
Cow position:
Alignm length: 287
Alignm identity: 201
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 137, 48

Conread position: 565-755
Cow position:
Alignm length: 195
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 148

Show alignments to all cow chromosomes.