Cow genome map


           Conread name:
           Ss1.1-rplun0112_o20.5
        

               Conread position:
               231-412
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               150, 68
               

               Conread position:
               231-412
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               59, 70
               

               Conread position:
               232-367
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               232-408
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               249-394
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               132, 50
               

               Conread position:
               250-603
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 33
               

               Conread position:
               258-755
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 34
               

               Conread position:
               263-476
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               270-577
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 29
               

               Conread position:
               270-579
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 29
               

               Conread position:
               270-586
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 29
               

               Conread position:
               273-502
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               101, 26
               

               Conread position:
               286-605
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 13
               

               Conread position:
               299-578
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 7
               

               Conread position:
               321-572
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               17, 13
               

               Conread position:
               321-752
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 13
               

               Conread position:
               321-752
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 95
               

               Conread position:
               321-755
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 13
               

               Conread position:
               336-755
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 382
               

               Conread position:
               364-604
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               15, 77
               

               Conread position:
               371-755
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 42
               

               Conread position:
               375-755
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 40
               

               Conread position:
               378-707
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               379-755
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 36
               

               Conread position:
               426-755
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 59
               

               Conread position:
               481-756
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 82
               

               Conread position:
               519-755
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               596-747
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               605-755
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               52, 0
               
Show alignments to all cow chromosomes.