Cow genome map


           Conread name:
           Ss1.1-rplun0113_o10.5
        

               Conread position:
               19-156
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               19-186
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               21-156
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               23-154
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               52, 57
               

               Conread position:
               149-251
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               149-255
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               157-251
               

               Cow position:
               
               

               Alignm length:
               95
               

               Alignm identity:
               80
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               303-403
               

               Cow position:
               
               

               Alignm length:
               101
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               406-517
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               406-517
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               516-606
               

               Cow position:
               
               

               Alignm length:
               91
               

               Alignm identity:
               82
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               607-754
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               607-755
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               741-881
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               744-883
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               744-883
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               949-1113
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               139
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               949-1113
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               144
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               949-1113
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               142
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1110-1343
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1110-1343
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1110-1343
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1337-1501
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               151
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1337-1504
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               152
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1337-1504
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               154
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1497-1847
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 163
               

               Conread position:
               1499-1850
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 135
               

               Conread position:
               1499-1850
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 134
               
Show alignments to all cow chromosomes.