Cow genome map
| Conread name: | Ss1.1-rplun0113_o10.5 |
| Conread position: | 19-156 |
| Cow position: | chr25:34516041-34516178 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-186 |
| Cow position: | chr25:34646116-34646285 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 21-156 |
| Cow position: | chr25:34518565-34518699 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 23-154 |
| Cow position: | chr25:33018332-33018463 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 52, 57 |
| Conread position: | 149-251 |
| Cow position: | chr25:33019647-33019749 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 149-255 |
| Cow position: | chr25:34522569-34522676 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 157-251 |
| Cow position: | chr25:34652330-34652424 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 80 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 303-403 |
| Cow position: | chr25:34662979-34663079 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 406-517 |
| Cow position: | chr25:32983431-32983542 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 406-517 |
| Cow position: | chr25:34666328-34666439 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 516-606 |
| Cow position: | chr25:32983801-32983891 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 607-754 |
| Cow position: | chr25:34669867-34670014 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 607-755 |
| Cow position: | chr25:32985209-32985357 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 741-881 |
| Cow position: | chr25:32988622-32988762 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 744-883 |
| Cow position: | chr25:34619105-34619244 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 744-883 |
| Cow position: | chr25:34677381-34677520 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 949-1113 |
| Cow position: | chr25:32995801-32995965 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 139 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 949-1113 |
| Cow position: | chr25:34623697-34623861 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 144 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 949-1113 |
| Cow position: | chr25:34685154-34685318 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 142 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1110-1343 |
| Cow position: | chr25:32998365-32998598 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1110-1343 |
| Cow position: | chr25:34626524-34626757 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1110-1343 |
| Cow position: | chr25:34688721-34688954 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1337-1501 |
| Cow position: | chr25:34628991-34629155 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 151 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1337-1504 |
| Cow position: | chr25:33000779-33000946 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 152 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1337-1504 |
| Cow position: | chr25:34691458-34691625 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 154 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1497-1847 |
| Cow position: | chr25:33002689-33003034 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 163 |
| Conread position: | 1499-1850 |
| Cow position: | chr25:34631444-34631794 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 135 |
| Conread position: | 1499-1850 |
| Cow position: | chr25:34694010-34694358 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 134 |
Show alignments to all cow chromosomes.