Cow genome map
| Conread name: | Ss1.1-rplun0130_c23.5 |
| Conread position: | 116-407 |
| Cow position: | chr11:34646439-34646731 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 7, 26 |
| Conread position: | 122-307 |
| Cow position: | chr11:42793118-42792932 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 19, 110 |
| Conread position: | 122-341 |
| Cow position: | chr11:13061375-13061161 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 96, 29 |
| Conread position: | 122-368 |
| Cow position: | chr11:30954853-30955102 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 52, 19 |
| Conread position: | 122-371 |
| Cow position: | chr11:47544985-47545239 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 19, 166 |
| Conread position: | 122-373 |
| Cow position: | chr11:23128688-23128435 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 19, 237 |
| Conread position: | 122-376 |
| Cow position: | chr11:30830761-30830504 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 122-378 |
| Cow position: | chr11:3393355-3393100 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 19, 57 |
| Conread position: | 122-380 |
| Cow position: | chr11:35684640-35684386 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 52, 19 |
| Conread position: | 122-388 |
| Cow position: | chr11:45434941-45435201 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 148, 19 |
| Conread position: | 122-407 |
| Cow position: | chr11:2907664-2907390 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 19, 105 |
| Conread position: | 122-408 |
| Cow position: | chr11:65762745-65762447 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 132-287 |
| Cow position: | chr11:16251384-16251223 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 132-374 |
| Cow position: | chr11:45646732-45646485 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 42, 169 |
| Conread position: | 132-376 |
| Cow position: | chr11:48496725-48496481 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 131, 32 |
| Conread position: | 132-408 |
| Cow position: | chr11:1625355-1625085 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 85, 31 |
| Conread position: | 133-318 |
| Cow position: | chr11:10620461-10620276 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 32 |
| Conread position: | 134-364 |
| Cow position: | chr11:52297354-52297123 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 7, 107 |
| Conread position: | 134-382 |
| Cow position: | chr11:52381007-52380758 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 22, 7 |
| Conread position: | 143-408 |
| Cow position: | chr11:76889926-76890184 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 56 |
| Conread position: | 146-334 |
| Cow position: | chr11:2092216-2092402 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 62, 25 |
| Conread position: | 146-362 |
| Cow position: | chr11:37804677-37804458 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 146-364 |
| Cow position: | chr11:71390687-71390468 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 25, 173 |
| Conread position: | 146-374 |
| Cow position: | chr11:83033355-83033134 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 146-377 |
| Cow position: | chr11:51729165-51729395 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 28, 75 |
| Conread position: | 146-408 |
| Cow position: | chr11:5201763-5201508 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 246, 17 |
| Conread position: | 157-380 |
| Cow position: | chr11:34121088-34121312 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 58, 26 |
| Conread position: | 157-408 |
| Cow position: | chr11:62620271-62620513 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 158-370 |
| Cow position: | chr11:39499246-39499459 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 69, 203 |
| Conread position: | 159-380 |
| Cow position: | chr11:15016936-15017172 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 54, 10 |
| Conread position: | 160-303 |
| Cow position: | chr11:65430955-65431091 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 56, 8 |
| Conread position: | 160-315 |
| Cow position: | chr11:46580251-46580406 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 9 |
| Conread position: | 160-317 |
| Cow position: | chr11:11045138-11044982 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 160-318 |
| Cow position: | chr11:81162539-81162381 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 68, 14 |
| Conread position: | 160-319 |
| Cow position: | chr11:21497417-21497575 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 34, 9 |
| Conread position: | 160-319 |
| Cow position: | chr11:24937559-24937718 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 69, 13 |
| Conread position: | 160-334 |
| Cow position: | chr11:69392453-69392630 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 24, 9 |
| Conread position: | 160-334 |
| Cow position: | chr11:75965754-75965584 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-341 |
| Cow position: | chr11:74316608-74316784 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-347 |
| Cow position: | chr11:50778269-50778448 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-355 |
| Cow position: | chr11:80537381-80537575 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 64, 9 |
| Conread position: | 160-357 |
| Cow position: | chr11:55494575-55494770 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 63, 9 |
| Conread position: | 160-362 |
| Cow position: | chr11:42044099-42043902 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 66, 120 |
| Conread position: | 160-363 |
| Cow position: | chr11:11558063-11558269 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 50, 9 |
| Conread position: | 160-363 |
| Cow position: | chr11:23586533-23586734 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 55, 9 |
| Conread position: | 160-364 |
| Cow position: | chr11:6194101-6194302 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 160-368 |
| Cow position: | chr11:39115389-39115597 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 56, 9 |
| Conread position: | 160-368 |
| Cow position: | chr11:41293923-41293718 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 66 |
| Conread position: | 160-368 |
| Cow position: | chr11:44036621-44036821 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 160-368 |
| Cow position: | chr11:44636862-44636655 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 56, 9 |
| Conread position: | 160-369 |
| Cow position: | chr11:27746820-27747024 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 160-369 |
| Cow position: | chr11:65767093-65767301 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 60, 13 |
| Conread position: | 160-370 |
| Cow position: | chr11:2576008-2575800 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 52, 9 |
| Conread position: | 160-370 |
| Cow position: | chr11:77319308-77319516 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 57, 13 |
| Conread position: | 160-370 |
| Cow position: | chr11:83043468-83043261 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-375 |
| Cow position: | chr11:2917690-2917480 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-376 |
| Cow position: | chr11:1071197-1070983 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 12 |
| Conread position: | 160-378 |
| Cow position: | chr11:43898035-43898248 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 160-379 |
| Cow position: | chr11:80556116-80556331 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 55, 9 |
| Conread position: | 160-380 |
| Cow position: | chr11:20238567-20238790 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 54, 9 |
| Conread position: | 160-380 |
| Cow position: | chr11:25386959-25387181 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 56, 203 |
| Conread position: | 160-380 |
| Cow position: | chr11:26275061-26274851 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-380 |
| Cow position: | chr11:30493894-30494105 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-380 |
| Cow position: | chr11:35580153-35580375 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 160-380 |
| Cow position: | chr11:66188427-66188203 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 67, 9 |
| Conread position: | 160-385 |
| Cow position: | chr11:44031898-44032128 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 55, 9 |
| Conread position: | 160-389 |
| Cow position: | chr11:66424985-66424759 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 60, 13 |
| Conread position: | 160-390 |
| Cow position: | chr11:59702382-59702613 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 160-392 |
| Cow position: | chr11:26845699-26845471 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 160-394 |
| Cow position: | chr11:33341251-33341018 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 160-396 |
| Cow position: | chr11:377748-377513 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 47, 9 |
| Conread position: | 160-396 |
| Cow position: | chr11:41812016-41811787 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 186, 8 |
| Conread position: | 160-397 |
| Cow position: | chr11:73924666-73924432 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 138, 9 |
| Conread position: | 160-407 |
| Cow position: | chr11:3233976-3234216 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 40, 55 |
| Conread position: | 160-408 |
| Cow position: | chr11:11125558-11125805 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 48, 9 |
| Conread position: | 160-408 |
| Cow position: | chr11:30192070-30192318 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 105, 9 |
| Conread position: | 160-408 |
| Cow position: | chr11:40608701-40608456 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 48, 9 |
| Conread position: | 160-415 |
| Cow position: | chr11:261367-261121 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 250, 9 |
| Conread position: | 162-397 |
| Cow position: | chr11:79019163-79018930 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 59, 37 |
| Conread position: | 162-419 |
| Cow position: | chr11:20761744-20761991 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 164-285 |
| Cow position: | chr11:33824992-33824869 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 164-347 |
| Cow position: | chr11:11232556-11232375 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 62, 39 |
| Conread position: | 164-362 |
| Cow position: | chr11:48272096-48272296 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 164-367 |
| Cow position: | chr11:22499465-22499266 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 164-370 |
| Cow position: | chr11:62789027-62789233 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 197 |
| Conread position: | 164-370 |
| Cow position: | chr11:67615030-67614821 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 58, 44 |
| Conread position: | 164-370 |
| Cow position: | chr11:80923425-80923221 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 49, 125 |
| Conread position: | 164-378 |
| Cow position: | chr11:83230498-83230291 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 164-380 |
| Cow position: | chr11:23407360-23407576 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 57, 196 |
| Conread position: | 164-380 |
| Cow position: | chr11:81135270-81135055 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 10, 64 |
| Conread position: | 164-396 |
| Cow position: | chr11:44234251-44234483 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 58, 196 |
| Conread position: | 164-398 |
| Cow position: | chr11:17036631-17036395 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 164-398 |
| Cow position: | chr11:42296719-42296491 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 165-315 |
| Cow position: | chr11:18588686-18588537 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 165-334 |
| Cow position: | chr11:67600682-67600852 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 165-341 |
| Cow position: | chr11:84490590-84490425 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 165-354 |
| Cow position: | chr11:49872987-49872800 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 55, 123 |
| Conread position: | 165-363 |
| Cow position: | chr11:19500886-19500695 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 165-368 |
| Cow position: | chr11:35153925-35153722 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 196, 185 |
| Conread position: | 165-369 |
| Cow position: | chr11:48085813-48086021 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 8, 199 |
| Conread position: | 165-370 |
| Cow position: | chr11:29960195-29960397 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 51, 124 |
| Conread position: | 165-372 |
| Cow position: | chr11:69075808-69076014 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 56, 113 |
| Conread position: | 165-377 |
| Cow position: | chr11:55052780-55052980 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 165-378 |
| Cow position: | chr11:67615347-67615137 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 65, 34 |
| Conread position: | 165-378 |
| Cow position: | chr11:67747184-67747393 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 193, 49 |
| Conread position: | 165-379 |
| Cow position: | chr11:27248392-27248601 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 165-380 |
| Cow position: | chr11:48295930-48296142 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 117 |
| Conread position: | 165-382 |
| Cow position: | chr11:39060701-39060489 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 18, 48 |
| Conread position: | 165-403 |
| Cow position: | chr11:50152916-50152676 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 165-408 |
| Cow position: | chr11:13592636-13592876 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 155, 42 |
| Conread position: | 165-408 |
| Cow position: | chr11:47772493-47772245 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 53, 193 |
| Conread position: | 165-408 |
| Cow position: | chr11:53773577-53773820 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 42, 176 |
| Conread position: | 166-370 |
| Cow position: | chr11:5366-5567 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 166-380 |
| Cow position: | chr11:31410984-31410766 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 15, 198 |
| Conread position: | 167-408 |
| Cow position: | chr11:80564194-80564434 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 231, 176 |
| Conread position: | 168-380 |
| Cow position: | chr11:17676468-17676261 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 169-364 |
| Cow position: | chr11:24599486-24599291 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 43, 148 |
| Conread position: | 169-372 |
| Cow position: | chr11:69119195-69119398 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 57, 192 |
| Conread position: | 170-395 |
| Cow position: | chr11:28643989-28644214 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 51, 190 |
| Conread position: | 171-287 |
| Cow position: | chr11:55911729-55911613 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 171-334 |
| Cow position: | chr11:52983582-52983743 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 171-346 |
| Cow position: | chr11:8428416-8428591 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 47, 61 |
| Conread position: | 171-362 |
| Cow position: | chr11:34113169-34113361 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 51, 64 |
| Conread position: | 171-364 |
| Cow position: | chr11:17083405-17083212 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 27 |
| Conread position: | 171-364 |
| Cow position: | chr11:69977881-69978068 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 171-372 |
| Cow position: | chr11:10213660-10213463 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 48, 145 |
| Conread position: | 171-378 |
| Cow position: | chr11:42160155-42159946 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 36, 125 |
| Conread position: | 171-408 |
| Cow position: | chr11:63999184-63998953 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 42, 86 |
| Conread position: | 173-356 |
| Cow position: | chr11:83032589-83032770 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 173-364 |
| Cow position: | chr11:259265-259075 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 48, 58 |
| Conread position: | 173-408 |
| Cow position: | chr11:8437782-8437550 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 187, 44 |
| Conread position: | 175-370 |
| Cow position: | chr11:35536497-35536690 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 179-367 |
| Cow position: | chr11:33409347-33409161 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 182-346 |
| Cow position: | chr11:82740424-82740589 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 184-309 |
| Cow position: | chr11:1779411-1779286 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 42, 92 |
| Conread position: | 184-319 |
| Cow position: | chr11:1849253-1849118 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 184-319 |
| Cow position: | chr11:54218635-54218767 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 184-319 |
| Cow position: | chr11:70619960-70620097 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 184-347 |
| Cow position: | chr11:53279796-53279634 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 105 |
| Conread position: | 184-370 |
| Cow position: | chr11:16342312-16342125 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 151 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 184-370 |
| Cow position: | chr11:62813033-62812848 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 184-383 |
| Cow position: | chr11:35803052-35803251 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 37, 104 |
| Conread position: | 184-392 |
| Cow position: | chr11:72292461-72292678 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 185-364 |
| Cow position: | chr11:17721885-17721704 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 185-370 |
| Cow position: | chr11:30354977-30355160 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 41 |
| Conread position: | 185-381 |
| Cow position: | chr11:44222801-44222997 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 12, 106 |
| Conread position: | 185-393 |
| Cow position: | chr11:28168505-28168300 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 32, 174 |
| Conread position: | 189-364 |
| Cow position: | chr11:4637250-4637074 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 189-366 |
| Cow position: | chr11:30867104-30867284 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 190-374 |
| Cow position: | chr11:35213245-35213062 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 169 |
| Conread position: | 195-372 |
| Cow position: | chr11:62150963-62150790 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 26, 93 |
| Conread position: | 196-386 |
| Cow position: | chr11:10363458-10363263 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 37, 142 |
| Conread position: | 200-369 |
| Cow position: | chr11:48248282-48248113 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 206-370 |
| Cow position: | chr11:34413398-34413238 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 207-390 |
| Cow position: | chr11:18851849-18852027 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 209-358 |
| Cow position: | chr11:18447548-18447400 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 210-364 |
| Cow position: | chr11:36329091-36328939 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 218-370 |
| Cow position: | chr11:21885784-21885934 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 11, 90 |
| Conread position: | 225-370 |
| Cow position: | chr11:897632-897776 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 226-381 |
| Cow position: | chr11:62376513-62376361 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 253-397 |
| Cow position: | chr11:70741129-70741271 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
Show alignments to all cow chromosomes.