Cow genome map
| Conread name: | Ss1.1-rplun0130_c23.5 |
| Conread position: | 118-385 |
| Cow position: | chr13:54388901-54389172 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 122-342 |
| Cow position: | chr13:8524508-8524724 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 104, 29 |
| Conread position: | 122-347 |
| Cow position: | chr13:8355312-8355092 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 29, 19 |
| Conread position: | 122-347 |
| Cow position: | chr13:15194619-15194848 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 122-347 |
| Cow position: | chr13:45023099-45023322 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 19, 76 |
| Conread position: | 122-370 |
| Cow position: | chr13:42200731-42200485 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 20, 105 |
| Conread position: | 122-376 |
| Cow position: | chr13:54582990-54582734 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 52, 19 |
| Conread position: | 122-407 |
| Cow position: | chr13:49503418-49503704 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 19, 276 |
| Conread position: | 123-358 |
| Cow position: | chr13:17966097-17966333 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 18, 104 |
| Conread position: | 123-370 |
| Cow position: | chr13:55316077-55316331 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 18, 244 |
| Conread position: | 132-354 |
| Cow position: | chr13:17114273-17114497 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 21, 205 |
| Conread position: | 132-354 |
| Cow position: | chr13:17745344-17745128 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 89, 31 |
| Conread position: | 132-362 |
| Cow position: | chr13:53566700-53566473 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 112 |
| Conread position: | 132-367 |
| Cow position: | chr13:31813976-31813742 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 90, 46 |
| Conread position: | 132-370 |
| Cow position: | chr13:11460726-11460496 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 21, 38 |
| Conread position: | 132-374 |
| Cow position: | chr13:24369685-24369440 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 41, 180 |
| Conread position: | 132-378 |
| Cow position: | chr13:14063417-14063665 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 132-378 |
| Cow position: | chr13:19393394-19393148 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 78, 11 |
| Conread position: | 132-383 |
| Cow position: | chr13:11381617-11381871 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 51, 244 |
| Conread position: | 132-402 |
| Cow position: | chr13:12045233-12045512 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 134-362 |
| Cow position: | chr13:37484173-37484408 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 7, 51 |
| Conread position: | 139-357 |
| Cow position: | chr13:12670353-12670574 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 30 |
| Conread position: | 139-382 |
| Cow position: | chr13:27525170-27525406 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 74 |
| Conread position: | 140-347 |
| Cow position: | chr13:8374678-8374885 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 26, 157 |
| Conread position: | 140-347 |
| Cow position: | chr13:15884926-15885135 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 140-398 |
| Cow position: | chr13:55727997-55727740 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 83 |
| Conread position: | 142-372 |
| Cow position: | chr13:19610470-19610700 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 150 |
| Conread position: | 143-370 |
| Cow position: | chr13:47022454-47022230 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 25, 76 |
| Conread position: | 143-384 |
| Cow position: | chr13:16014900-16014663 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 23, 41 |
| Conread position: | 146-354 |
| Cow position: | chr13:15903107-15902904 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 174, 25 |
| Conread position: | 146-369 |
| Cow position: | chr13:21242002-21242217 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 146-371 |
| Cow position: | chr13:13176742-13176512 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 146-377 |
| Cow position: | chr13:15288838-15289062 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 80, 25 |
| Conread position: | 146-378 |
| Cow position: | chr13:152045-151821 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 146-380 |
| Cow position: | chr13:23479118-23478884 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 72, 44 |
| Conread position: | 146-408 |
| Cow position: | chr13:35526119-35526366 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 148-400 |
| Cow position: | chr13:17563821-17563570 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 215, 70 |
| Conread position: | 154-376 |
| Cow position: | chr13:38329706-38329474 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 154-405 |
| Cow position: | chr13:50750974-50751224 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 18, 186 |
| Conread position: | 155-368 |
| Cow position: | chr13:48037700-48037491 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 11, 133 |
| Conread position: | 155-407 |
| Cow position: | chr13:21275934-21275689 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 156-347 |
| Cow position: | chr13:29123381-29123191 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 125, 5 |
| Conread position: | 157-346 |
| Cow position: | chr13:34555752-34555940 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 65, 24 |
| Conread position: | 159-380 |
| Cow position: | chr13:17021656-17021869 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 160-319 |
| Cow position: | chr13:890100-890254 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-349 |
| Cow position: | chr13:48862024-48862210 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 56, 9 |
| Conread position: | 160-356 |
| Cow position: | chr13:15528960-15529159 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 160-356 |
| Cow position: | chr13:17821196-17821392 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 160-356 |
| Cow position: | chr13:34263297-34263491 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 59, 12 |
| Conread position: | 160-362 |
| Cow position: | chr13:56686505-56686306 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 66, 11 |
| Conread position: | 160-364 |
| Cow position: | chr13:20473610-20473812 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-369 |
| Cow position: | chr13:12202438-12202225 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 160-370 |
| Cow position: | chr13:971821-972031 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 50, 9 |
| Conread position: | 160-370 |
| Cow position: | chr13:13196313-13196105 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 93, 9 |
| Conread position: | 160-370 |
| Cow position: | chr13:52477574-52477780 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 58, 9 |
| Conread position: | 160-374 |
| Cow position: | chr13:5758269-5758481 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-374 |
| Cow position: | chr13:20706134-20706343 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 160-375 |
| Cow position: | chr13:19882964-19883177 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 57, 12 |
| Conread position: | 160-375 |
| Cow position: | chr13:55674137-55674347 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-376 |
| Cow position: | chr13:43480129-43479918 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 66, 9 |
| Conread position: | 160-377 |
| Cow position: | chr13:17569028-17569243 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 9 |
| Conread position: | 160-378 |
| Cow position: | chr13:21170602-21170384 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 111, 201 |
| Conread position: | 160-380 |
| Cow position: | chr13:19279168-19278948 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 58, 9 |
| Conread position: | 160-380 |
| Cow position: | chr13:20288402-20288194 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-380 |
| Cow position: | chr13:21135828-21136051 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 136, 9 |
| Conread position: | 160-382 |
| Cow position: | chr13:18696915-18696695 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 56, 8 |
| Conread position: | 160-387 |
| Cow position: | chr13:9981769-9981992 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 160-387 |
| Cow position: | chr13:18058174-18058398 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 62, 9 |
| Conread position: | 160-396 |
| Cow position: | chr13:2414100-2413869 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-397 |
| Cow position: | chr13:18172410-18172175 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 160-397 |
| Cow position: | chr13:20679411-20679176 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-397 |
| Cow position: | chr13:37381876-37381638 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 23, 9 |
| Conread position: | 160-402 |
| Cow position: | chr13:17292061-17292299 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 50, 9 |
| Conread position: | 160-403 |
| Cow position: | chr13:5671519-5671753 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-408 |
| Cow position: | chr13:13261076-13260831 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 56, 12 |
| Conread position: | 160-408 |
| Cow position: | chr13:19022347-19022097 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 58, 13 |
| Conread position: | 164-347 |
| Cow position: | chr13:7265050-7265233 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 28, 66 |
| Conread position: | 164-347 |
| Cow position: | chr13:57494119-57494302 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 60, 32 |
| Conread position: | 164-364 |
| Cow position: | chr13:13501552-13501748 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 8, 50 |
| Conread position: | 164-372 |
| Cow position: | chr13:37803952-37803755 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 13, 32 |
| Conread position: | 164-374 |
| Cow position: | chr13:19320604-19320392 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 164-374 |
| Cow position: | chr13:20868687-20868892 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 204, 26 |
| Conread position: | 164-374 |
| Cow position: | chr13:48165355-48165564 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 43, 84 |
| Conread position: | 164-378 |
| Cow position: | chr13:26698429-26698643 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 48, 68 |
| Conread position: | 165-307 |
| Cow position: | chr13:12619046-12619188 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 165-334 |
| Cow position: | chr13:18243929-18243762 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 165-347 |
| Cow position: | chr13:22085676-22085859 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 165-362 |
| Cow position: | chr13:20784662-20784462 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 165-364 |
| Cow position: | chr13:10928923-10929118 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 5, 105 |
| Conread position: | 165-364 |
| Cow position: | chr13:46329536-46329736 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 165-364 |
| Cow position: | chr13:53574038-53573840 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 50, 62 |
| Conread position: | 165-367 |
| Cow position: | chr13:15757188-15756990 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 165-368 |
| Cow position: | chr13:20666317-20666518 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 48, 126 |
| Conread position: | 165-375 |
| Cow position: | chr13:13089095-13088891 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 98 |
| Conread position: | 165-377 |
| Cow position: | chr13:24586111-24585907 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 165-378 |
| Cow position: | chr13:25817596-25817385 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 55, 130 |
| Conread position: | 165-378 |
| Cow position: | chr13:34281744-34281534 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 191, 122 |
| Conread position: | 165-380 |
| Cow position: | chr13:13320862-13320653 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 165-380 |
| Cow position: | chr13:54702255-54702035 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 159, 174 |
| Conread position: | 165-385 |
| Cow position: | chr13:21288018-21288236 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 165-397 |
| Cow position: | chr13:20684053-20684292 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 165-407 |
| Cow position: | chr13:35659821-35659589 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 165-408 |
| Cow position: | chr13:17439702-17439940 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 177, 118 |
| Conread position: | 166-362 |
| Cow position: | chr13:21176255-21176447 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 166-371 |
| Cow position: | chr13:8402123-8401920 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 54, 125 |
| Conread position: | 167-395 |
| Cow position: | chr13:56148589-56148362 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 59 |
| Conread position: | 167-395 |
| Cow position: | chr13:56160378-56160605 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 48, 59 |
| Conread position: | 171-372 |
| Cow position: | chr13:20314557-20314759 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 25, 191 |
| Conread position: | 171-380 |
| Cow position: | chr13:41806837-41806628 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 164 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 45, 189 |
| Conread position: | 172-387 |
| Cow position: | chr13:18197546-18197759 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 47, 82 |
| Conread position: | 173-396 |
| Cow position: | chr13:5082712-5082487 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 47, 120 |
| Conread position: | 173-408 |
| Cow position: | chr13:11103131-11103375 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 174-354 |
| Cow position: | chr13:18181714-18181895 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 175-330 |
| Cow position: | chr13:15233980-15233830 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 35, 49 |
| Conread position: | 175-372 |
| Cow position: | chr13:52057618-52057421 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 185 |
| Conread position: | 177-363 |
| Cow position: | chr13:15144309-15144495 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 181, 159 |
| Conread position: | 177-376 |
| Cow position: | chr13:19007988-19007792 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 43, 105 |
| Conread position: | 177-378 |
| Cow position: | chr13:17350409-17350213 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 116 |
| Conread position: | 184-376 |
| Cow position: | chr13:17611501-17611695 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 184-378 |
| Cow position: | chr13:35557056-35557253 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 27, 181 |
| Conread position: | 184-379 |
| Cow position: | chr13:23667303-23667106 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 42, 60 |
| Conread position: | 184-382 |
| Cow position: | chr13:15257320-15257513 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 184-384 |
| Cow position: | chr13:21171523-21171720 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 92, 38 |
| Conread position: | 184-397 |
| Cow position: | chr13:56155104-56155316 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 178, 106 |
| Conread position: | 184-405 |
| Cow position: | chr13:23856261-23856042 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 36, 75 |
| Conread position: | 186-347 |
| Cow position: | chr13:15166866-15166705 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 82 |
| Conread position: | 186-358 |
| Cow position: | chr13:17089476-17089643 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 188-362 |
| Cow position: | chr13:20217350-20217526 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 188-390 |
| Cow position: | chr13:20534939-20534743 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 189-363 |
| Cow position: | chr13:15460730-15460905 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 190-364 |
| Cow position: | chr13:28440492-28440665 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 23, 99 |
| Conread position: | 190-374 |
| Cow position: | chr13:55494477-55494666 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 199-397 |
| Cow position: | chr13:23526146-23525949 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 22, 86 |
| Conread position: | 208-387 |
| Cow position: | chr13:38283954-38284130 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 107, 10 |
| Conread position: | 210-397 |
| Cow position: | chr13:51227716-51227904 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 15 |
| Conread position: | 213-356 |
| Cow position: | chr13:56535476-56535333 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 34, 58 |
| Conread position: | 216-390 |
| Cow position: | chr13:6086876-6087046 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 9 |
| Conread position: | 216-419 |
| Cow position: | chr13:37621342-37621544 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 190, 72 |
| Conread position: | 219-397 |
| Cow position: | chr13:3209306-3209483 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 122, 19 |
| Conread position: | 225-363 |
| Cow position: | chr13:48465827-48465960 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 247-408 |
| Cow position: | chr13:53850811-53850653 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 248-390 |
| Cow position: | chr13:33854698-33854838 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 108, 0 |
Show alignments to all cow chromosomes.