Cow genome map

Conread name: Ss1.1-rplun0130_c23.5

Conread position: 121-384
Cow position: chr15:29331221-29330962 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 20

Conread position: 122-354
Cow position: chr15:20352046-20351816 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 152
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 44, 98

Conread position: 122-364
Cow position: chr15:8354260-8354015 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 19, 50

Conread position: 122-372
Cow position: chr15:16823154-16822907 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 19, 164

Conread position: 131-414
Cow position: chr15:23275744-23275464 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 25, 66

Conread position: 132-361
Cow position: chr15:42788942-42789171 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 10, 81

Conread position: 132-368
Cow position: chr15:16307621-16307393 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 42, 61

Conread position: 132-378
Cow position: chr15:24994312-24994554 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 240, 32

Conread position: 132-408
Cow position: chr15:26911870-26912137 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 184
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 10, 95

Conread position: 139-399
Cow position: chr15:20391076-20391338 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 27, 102

Conread position: 139-406
Cow position: chr15:38837944-38837682 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 33, 60

Conread position: 140-374
Cow position: chr15:33306307-33306074 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 32, 60

Conread position: 143-379
Cow position: chr15:51307485-51307718 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 29, 190

Conread position: 145-370
Cow position: chr15:10563310-10563535 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 82, 9

Conread position: 146-331
Cow position: chr15:24305286-24305474 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 22, 155

Conread position: 146-370
Cow position: chr15:39598437-39598210 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 28, 57

Conread position: 153-356
Cow position: chr15:14870927-14870725 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 60, 136

Conread position: 156-315
Cow position: chr15:20472365-20472525 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 113
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 157-302
Cow position: chr15:38877122-38877268 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 159-380
Cow position: chr15:36353845-36353628 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 63, 10

Conread position: 160-319
Cow position: chr15:13515544-13515385 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 9

Conread position: 160-319
Cow position: chr15:50322771-50322613 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 58, 9

Conread position: 160-325
Cow position: chr15:18647553-18647393 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 49, 9

Conread position: 160-334
Cow position: chr15:35425638-35425805 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 160-347
Cow position: chr15:12304817-12304629 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 67, 9

Conread position: 160-347
Cow position: chr15:41125395-41125582 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 130
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 160, 12

Conread position: 160-354
Cow position: chr15:25907093-25906891 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 48, 9

Conread position: 160-356
Cow position: chr15:4093757-4093951 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 160-362
Cow position: chr15:30470794-30470996 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 56, 9

Conread position: 160-368
Cow position: chr15:17337534-17337334 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 160-374
Cow position: chr15:14888465-14888680 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 50, 9

Conread position: 160-376
Cow position: chr15:36259427-36259639 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 160, 9

Conread position: 160-378
Cow position: chr15:14576510-14576288 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 151
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 57, 13

Conread position: 160-385
Cow position: chr15:18671277-18671501 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 150
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 67, 9

Conread position: 160-397
Cow position: chr15:10335932-10335697 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 13

Conread position: 160-397
Cow position: chr15:35440900-35441135 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 55, 9

Conread position: 160-398
Cow position: chr15:23696735-23696966 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 137, 9

Conread position: 160-408
Cow position: chr15:16112575-16112330 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 233, 9

Conread position: 160-408
Cow position: chr15:53716608-53716370 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 162-368
Cow position: chr15:5726497-5726296 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 163-386
Cow position: chr15:3700112-3700333 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 102

Conread position: 164-265
Cow position: chr15:16261487-16261386 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 8, 56

Conread position: 164-319
Cow position: chr15:6970161-6970006 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 164-319
Cow position: chr15:40415466-40415620 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 164-352
Cow position: chr15:5730114-5729926 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 118, 61

Conread position: 164-368
Cow position: chr15:5420708-5420913 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 197

Conread position: 164-368
Cow position: chr15:30047370-30047573 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 53, 187

Conread position: 164-384
Cow position: chr15:17870113-17870330 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 108, 52

Conread position: 165-317
Cow position: chr15:21821160-21821009 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 118

Conread position: 165-347
Cow position: chr15:26117688-26117515 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 165-358
Cow position: chr15:25208591-25208777 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 165-362
Cow position: chr15:46868540-46868738 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 53, 155

Conread position: 165-362
Cow position: chr15:50302355-50302160 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 39

Conread position: 165-370
Cow position: chr15:48710881-48711084 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 47, 126

Conread position: 165-371
Cow position: chr15:16908603-16908402 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 33, 0

Conread position: 165-372
Cow position: chr15:10442332-10442535 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 49, 88

Conread position: 165-396
Cow position: chr15:6530676-6530904 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 173
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 195, 54

Conread position: 165-396
Cow position: chr15:40999897-41000129 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 155
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 116

Conread position: 165-397
Cow position: chr15:29542052-29541819 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 33, 61

Conread position: 165-406
Cow position: chr15:23115011-23114769 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 185

Conread position: 165-406
Cow position: chr15:36435376-36435140 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 155, 48

Conread position: 165-419
Cow position: chr15:47042456-47042708 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 197

Conread position: 166-380
Cow position: chr15:33643263-33643050 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 60, 186

Conread position: 166-419
Cow position: chr15:275824-275577 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 52, 32

Conread position: 168-347
Cow position: chr15:6905241-6905068 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 125, 45

Conread position: 168-408
Cow position: chr15:41056036-41056276 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 188, 34

Conread position: 169-408
Cow position: chr15:36846007-36846251 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 119

Conread position: 171-361
Cow position: chr15:49258028-49257841 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 130
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 171-398
Cow position: chr15:14988155-14987931 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 55, 12

Conread position: 171-407
Cow position: chr15:14176334-14176566 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 225, 47

Conread position: 175-384
Cow position: chr15:26718759-26718966 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 40, 60

Conread position: 175-419
Cow position: chr15:5658001-5657751 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 49, 68

Conread position: 177-370
Cow position: chr15:17763067-17762877 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 92

Conread position: 178-390
Cow position: chr15:25571649-25571863 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 146
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 41, 48

Conread position: 179-380
Cow position: chr15:4694903-4694704 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 158

Conread position: 184-334
Cow position: chr15:41360799-41360946 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 49, 14

Conread position: 184-342
Cow position: chr15:23567973-23568131 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 40

Conread position: 184-346
Cow position: chr15:22442120-22442285 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 184-354
Cow position: chr15:78726-78558 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 34, 109

Conread position: 184-363
Cow position: chr15:36952047-36952227 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 107

Conread position: 184-377
Cow position: chr15:44237571-44237379 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 176, 0

Conread position: 184-382
Cow position: chr15:244939-244738 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 29, 14

Conread position: 184-408
Cow position: chr15:13395703-13395484 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 24, 13

Conread position: 185-345
Cow position: chr15:52809431-52809589 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 78, 34

Conread position: 185-347
Cow position: chr15:26404434-26404274 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 185-352
Cow position: chr15:39090444-39090282 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 185-363
Cow position: chr15:37284607-37284428 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 11

Conread position: 185-393
Cow position: chr15:25650269-25650463 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 186-376
Cow position: chr15:3695785-3695598 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 27, 104

Conread position: 186-396
Cow position: chr15:40594351-40594563 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 187-319
Cow position: chr15:28038927-28038795 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 118

Conread position: 187-388
Cow position: chr15:52317208-52317009 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 137

Conread position: 189-370
Cow position: chr15:34751233-34751057 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 209-408
Cow position: chr15:50333110-50332911 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 25, 84

Conread position: 210-372
Cow position: chr15:30986167-30986329 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 79

Conread position: 216-397
Cow position: chr15:14261138-14261314 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 218-397
Cow position: chr15:23719362-23719540 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 10, 141

Conread position: 222-370
Cow position: chr15:9879261-9879414 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 226-383
Cow position: chr15:26442327-26442170 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 247-384
Cow position: chr15:34223957-34223822 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 111, 0

Show alignments to all cow chromosomes.