Cow genome map

Conread name: Ss1.1-rplun0130_c23.5

Conread position: 118-354
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 5, 104

Conread position: 122-319
Cow position:
Alignm length: 200
Alignm identity: 139
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 106, 19

Conread position: 122-368
Cow position:
Alignm length: 250
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 239

Conread position: 124-368
Cow position:
Alignm length: 250
Alignm identity: 167
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 37, 100

Conread position: 129-398
Cow position:
Alignm length: 273
Alignm identity: 188
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 46, 95

Conread position: 130-364
Cow position:
Alignm length: 241
Alignm identity: 167
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 43, 110

Conread position: 132-318
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 132-362
Cow position:
Alignm length: 236
Alignm identity: 160
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 40, 92

Conread position: 132-368
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 132-382
Cow position:
Alignm length: 254
Alignm identity: 169
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 42, 83

Conread position: 133-378
Cow position:
Alignm length: 248
Alignm identity: 173
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 214, 40

Conread position: 134-383
Cow position:
Alignm length: 255
Alignm identity: 171
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 51, 30

Conread position: 135-398
Cow position:
Alignm length: 267
Alignm identity: 185
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 7, 26

Conread position: 138-354
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 39, 104

Conread position: 146-370
Cow position:
Alignm length: 227
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 74, 53

Conread position: 146-370
Cow position:
Alignm length: 226
Alignm identity: 152
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 69, 17

Conread position: 146-372
Cow position:
Alignm length: 228
Alignm identity: 153
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 78, 28

Conread position: 146-383
Cow position:
Alignm length: 240
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 57

Conread position: 151-347
Cow position:
Alignm length: 201
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 114, 18

Conread position: 154-396
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 25, 57

Conread position: 154-407
Cow position:
Alignm length: 258
Alignm identity: 166
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 18, 73

Conread position: 155-369
Cow position:
Alignm length: 215
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 157-379
Cow position:
Alignm length: 223
Alignm identity: 149
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 157-380
Cow position:
Alignm length: 225
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 70, 202

Conread position: 159-407
Cow position:
Alignm length: 256
Alignm identity: 176
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 8, 54

Conread position: 160-319
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 56, 11

Conread position: 160-334
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 160-345
Cow position:
Alignm length: 188
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 9

Conread position: 160-347
Cow position:
Alignm length: 192
Alignm identity: 143
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 61, 9

Conread position: 160-354
Cow position:
Alignm length: 196
Alignm identity: 145
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 55, 9

Conread position: 160-355
Cow position:
Alignm length: 196
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 160-358
Cow position:
Alignm length: 202
Alignm identity: 140
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 61, 138

Conread position: 160-360
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 62, 9

Conread position: 160-365
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 160-367
Cow position:
Alignm length: 210
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 13

Conread position: 160-368
Cow position:
Alignm length: 209
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 160-368
Cow position:
Alignm length: 215
Alignm identity: 163
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 56, 9

Conread position: 160-368
Cow position:
Alignm length: 209
Alignm identity: 154
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 160-370
Cow position:
Alignm length: 214
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 86, 9

Conread position: 160-370
Cow position:
Alignm length: 217
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 36

Conread position: 160-372
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 57, 9

Conread position: 160-375
Cow position:
Alignm length: 217
Alignm identity: 153
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 57, 9

Conread position: 160-378
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 62, 9

Conread position: 160-378
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 14

Conread position: 160-379
Cow position:
Alignm length: 220
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 160-380
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 160-382
Cow position:
Alignm length: 223
Alignm identity: 163
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 9, 0

Conread position: 160-390
Cow position:
Alignm length: 233
Alignm identity: 173
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 118, 13

Conread position: 160-398
Cow position:
Alignm length: 240
Alignm identity: 170
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 88, 9

Conread position: 160-406
Cow position:
Alignm length: 247
Alignm identity: 160
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 160-407
Cow position:
Alignm length: 248
Alignm identity: 170
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 160-407
Cow position:
Alignm length: 249
Alignm identity: 166
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 237, 9

Conread position: 160-408
Cow position:
Alignm length: 255
Alignm identity: 180
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 19, 9

Conread position: 160-408
Cow position:
Alignm length: 249
Alignm identity: 181
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 9, 0

Conread position: 160-408
Cow position:
Alignm length: 251
Alignm identity: 170
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 63, 9

Conread position: 160-408
Cow position:
Alignm length: 249
Alignm identity: 163
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 161-370
Cow position:
Alignm length: 211
Alignm identity: 153
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 57, 11

Conread position: 163-372
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 10, 0

Conread position: 164-319
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 125

Conread position: 164-348
Cow position:
Alignm length: 185
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 101, 0

Conread position: 164-377
Cow position:
Alignm length: 214
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 164-378
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 164-380
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 102, 60

Conread position: 164-382
Cow position:
Alignm length: 221
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 127

Conread position: 164-387
Cow position:
Alignm length: 224
Alignm identity: 164
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 79, 0

Conread position: 164-387
Cow position:
Alignm length: 224
Alignm identity: 165
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 79, 0

Conread position: 164-407
Cow position:
Alignm length: 246
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 15

Conread position: 164-407
Cow position:
Alignm length: 246
Alignm identity: 177
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 199, 60

Conread position: 164-419
Cow position:
Alignm length: 257
Alignm identity: 177
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 246, 32

Conread position: 165-347
Cow position:
Alignm length: 184
Alignm identity: 140
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 54, 146

Conread position: 165-362
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 165-364
Cow position:
Alignm length: 203
Alignm identity: 140
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 57, 120

Conread position: 165-366
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 53, 197

Conread position: 165-370
Cow position:
Alignm length: 207
Alignm identity: 147
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 53, 12

Conread position: 165-372
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 78, 0

Conread position: 165-376
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 44, 193

Conread position: 165-377
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 51, 71

Conread position: 165-378
Cow position:
Alignm length: 215
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 199, 58

Conread position: 165-379
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 55, 79

Conread position: 165-382
Cow position:
Alignm length: 219
Alignm identity: 168
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 112, 53

Conread position: 165-396
Cow position:
Alignm length: 237
Alignm identity: 172
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 126

Conread position: 165-397
Cow position:
Alignm length: 233
Alignm identity: 156
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 165-408
Cow position:
Alignm length: 246
Alignm identity: 164
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 165, 60

Conread position: 165-408
Cow position:
Alignm length: 246
Alignm identity: 174
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 217, 46

Conread position: 166-361
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 166-370
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 52, 23

Conread position: 166-370
Cow position:
Alignm length: 208
Alignm identity: 145
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 182, 58

Conread position: 166-403
Cow position:
Alignm length: 243
Alignm identity: 181
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 53, 216

Conread position: 166-407
Cow position:
Alignm length: 243
Alignm identity: 167
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 232, 17

Conread position: 166-407
Cow position:
Alignm length: 244
Alignm identity: 170
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 200, 17

Conread position: 166-408
Cow position:
Alignm length: 244
Alignm identity: 161
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 52, 20

Conread position: 171-372
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 47, 58

Conread position: 171-407
Cow position:
Alignm length: 238
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 224, 23

Conread position: 173-408
Cow position:
Alignm length: 239
Alignm identity: 181
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 174, 45

Conread position: 174-408
Cow position:
Alignm length: 236
Alignm identity: 171
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 60, 44

Conread position: 175-368
Cow position:
Alignm length: 198
Alignm identity: 152
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 13, 165

Conread position: 182-376
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 184-319
Cow position:
Alignm length: 137
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 35, 60

Conread position: 184-326
Cow position:
Alignm length: 144
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 134, 0

Conread position: 184-362
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 23, 96

Conread position: 184-378
Cow position:
Alignm length: 203
Alignm identity: 154
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 31, 43

Conread position: 184-379
Cow position:
Alignm length: 197
Alignm identity: 149
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 33, 0

Conread position: 184-382
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 37, 23

Conread position: 184-398
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 44, 23

Conread position: 185-367
Cow position:
Alignm length: 185
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 170

Conread position: 185-368
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 138, 27

Conread position: 185-369
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 175

Conread position: 185-374
Cow position:
Alignm length: 191
Alignm identity: 134
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 176, 24

Conread position: 185-386
Cow position:
Alignm length: 203
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 5

Conread position: 185-408
Cow position:
Alignm length: 224
Alignm identity: 155
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 186-319
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 64

Conread position: 186-369
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 142, 26

Conread position: 186-382
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 187-347
Cow position:
Alignm length: 163
Alignm identity: 118
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 187-380
Cow position:
Alignm length: 194
Alignm identity: 135
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 188-400
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 27, 87

Conread position: 189-368
Cow position:
Alignm length: 183
Alignm identity: 131
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 169

Conread position: 190-347
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 191-368
Cow position:
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 70

Conread position: 191-383
Cow position:
Alignm length: 194
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 33, 100

Conread position: 195-380
Cow position:
Alignm length: 195
Alignm identity: 144
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 19, 172

Conread position: 202-408
Cow position:
Alignm length: 208
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 29

Conread position: 206-408
Cow position:
Alignm length: 205
Alignm identity: 142
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 9, 84

Conread position: 211-376
Cow position:
Alignm length: 166
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 213-396
Cow position:
Alignm length: 184
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 145, 0

Conread position: 214-380
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 218-408
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 114, 107

Conread position: 220-382
Cow position:
Alignm length: 163
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 138, 0

Conread position: 225-376
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 68, 64

Conread position: 233-379
Cow position:
Alignm length: 147
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 125, 0

Conread position: 274-396
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 22

Conread position: 275-392
Cow position:
Alignm length: 118
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 83, 0

Show alignments to all cow chromosomes.