Cow genome map
| Conread name: | Ss1.1-rplun0130_c23.5 |
| Conread position: | 88-408 |
| Cow position: | chr18:22056078-22055742 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 30, 20 |
| Conread position: | 97-381 |
| Cow position: | chr18:28658089-28657810 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 44, 13 |
| Conread position: | 103-375 |
| Cow position: | chr18:11779481-11779745 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 122-305 |
| Cow position: | chr18:33407453-33407640 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 122-329 |
| Cow position: | chr18:5487090-5487289 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 122-347 |
| Cow position: | chr18:28101471-28101697 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 20, 148 |
| Conread position: | 122-368 |
| Cow position: | chr18:37002473-37002716 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 27, 99 |
| Conread position: | 122-370 |
| Cow position: | chr18:38686934-38687166 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 122-373 |
| Cow position: | chr18:1954750-1954500 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 19, 64 |
| Conread position: | 122-380 |
| Cow position: | chr18:29058654-29058405 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 19, 31 |
| Conread position: | 122-396 |
| Cow position: | chr18:56183781-56184047 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 19, 57 |
| Conread position: | 122-398 |
| Cow position: | chr18:42432254-42431972 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 19, 173 |
| Conread position: | 123-323 |
| Cow position: | chr18:30248290-30248098 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 136, 31 |
| Conread position: | 123-408 |
| Cow position: | chr18:33896587-33896291 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 124-374 |
| Cow position: | chr18:9089541-9089791 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 17, 61 |
| Conread position: | 132-318 |
| Cow position: | chr18:3370746-3370936 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 10, 161 |
| Conread position: | 132-346 |
| Cow position: | chr18:10575956-10576175 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 88, 39 |
| Conread position: | 132-380 |
| Cow position: | chr18:9365764-9366019 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 132-408 |
| Cow position: | chr18:4884663-4884399 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 57, 22 |
| Conread position: | 134-317 |
| Cow position: | chr18:55461856-55461671 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 7, 75 |
| Conread position: | 134-334 |
| Cow position: | chr18:20126157-20126357 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 31, 66 |
| Conread position: | 139-378 |
| Cow position: | chr18:29958299-29958076 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 140-408 |
| Cow position: | chr18:34220062-34219787 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 23, 36 |
| Conread position: | 145-306 |
| Cow position: | chr18:45079609-45079449 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 71, 24 |
| Conread position: | 146-359 |
| Cow position: | chr18:44802026-44801812 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 17, 75 |
| Conread position: | 146-369 |
| Cow position: | chr18:50082388-50082172 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 27, 70 |
| Conread position: | 146-396 |
| Cow position: | chr18:16997114-16997366 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 12, 216 |
| Conread position: | 146-397 |
| Cow position: | chr18:25647390-25647134 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 28, 148 |
| Conread position: | 156-369 |
| Cow position: | chr18:23630728-23630521 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 157-367 |
| Cow position: | chr18:51190718-51190514 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 159-362 |
| Cow position: | chr18:20641609-20641416 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 160-286 |
| Cow position: | chr18:44549034-44548908 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 9 |
| Conread position: | 160-319 |
| Cow position: | chr18:16686456-16686298 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-319 |
| Cow position: | chr18:29356746-29356587 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 56, 9 |
| Conread position: | 160-324 |
| Cow position: | chr18:25206309-25206146 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 66, 13 |
| Conread position: | 160-334 |
| Cow position: | chr18:5578187-5578359 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 58, 9 |
| Conread position: | 160-334 |
| Cow position: | chr18:44483891-44483721 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 160-341 |
| Cow position: | chr18:13507858-13507681 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 57, 9 |
| Conread position: | 160-344 |
| Cow position: | chr18:23766532-23766347 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 62, 9 |
| Conread position: | 160-346 |
| Cow position: | chr18:42751731-42751539 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 12 |
| Conread position: | 160-346 |
| Cow position: | chr18:55119750-55119939 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 160-359 |
| Cow position: | chr18:18369482-18369285 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 9 |
| Conread position: | 160-362 |
| Cow position: | chr18:54130453-54130250 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 9 |
| Conread position: | 160-366 |
| Cow position: | chr18:4539998-4539798 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 160-367 |
| Cow position: | chr18:52854931-52855140 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 8 |
| Conread position: | 160-368 |
| Cow position: | chr18:37023672-37023466 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 62, 9 |
| Conread position: | 160-368 |
| Cow position: | chr18:45904013-45903813 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-370 |
| Cow position: | chr18:15517296-15517087 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 53, 9 |
| Conread position: | 160-370 |
| Cow position: | chr18:47511886-47512092 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-374 |
| Cow position: | chr18:19273222-19273004 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 160-374 |
| Cow position: | chr18:44262507-44262720 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 64, 9 |
| Conread position: | 160-376 |
| Cow position: | chr18:1571356-1571145 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 160-381 |
| Cow position: | chr18:12113496-12113268 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 51, 9 |
| Conread position: | 160-382 |
| Cow position: | chr18:36230844-36230629 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 58, 13 |
| Conread position: | 160-382 |
| Cow position: | chr18:39875378-39875162 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 57, 9 |
| Conread position: | 160-382 |
| Cow position: | chr18:55505288-55505503 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-386 |
| Cow position: | chr18:46135623-46135844 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 160-388 |
| Cow position: | chr18:45104564-45104334 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 54, 9 |
| Conread position: | 160-392 |
| Cow position: | chr18:28923955-28923741 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-406 |
| Cow position: | chr18:19687901-19688146 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 57, 8 |
| Conread position: | 160-407 |
| Cow position: | chr18:4556285-4556045 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 208, 9 |
| Conread position: | 160-408 |
| Cow position: | chr18:34834371-34834616 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 160-408 |
| Cow position: | chr18:49841159-49841406 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 72, 9 |
| Conread position: | 162-362 |
| Cow position: | chr18:17391101-17390914 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 162-364 |
| Cow position: | chr18:51594922-51594722 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 5, 26 |
| Conread position: | 162-380 |
| Cow position: | chr18:10904729-10904944 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 64, 175 |
| Conread position: | 162-408 |
| Cow position: | chr18:55000862-55000617 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 55, 149 |
| Conread position: | 164-344 |
| Cow position: | chr18:40759090-40759272 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 44, 62 |
| Conread position: | 164-347 |
| Cow position: | chr18:26938863-26939048 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 164-354 |
| Cow position: | chr18:18592359-18592545 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 164-367 |
| Cow position: | chr18:11377248-11377449 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 164-376 |
| Cow position: | chr18:8171202-8170994 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 54, 62 |
| Conread position: | 164-382 |
| Cow position: | chr18:42431729-42431510 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 165-347 |
| Cow position: | chr18:33299786-33299969 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 165-354 |
| Cow position: | chr18:2146701-2146507 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 18 |
| Conread position: | 165-354 |
| Cow position: | chr18:49100485-49100296 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 165-359 |
| Cow position: | chr18:45570897-45571089 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 155, 132 |
| Conread position: | 165-366 |
| Cow position: | chr18:8299900-8300100 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 56, 147 |
| Conread position: | 165-367 |
| Cow position: | chr18:21740925-21740730 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 165-374 |
| Cow position: | chr18:48713434-48713641 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 193, 0 |
| Conread position: | 165-376 |
| Cow position: | chr18:49038344-49038556 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 47, 196 |
| Conread position: | 165-380 |
| Cow position: | chr18:33007945-33008164 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 64, 144 |
| Conread position: | 165-390 |
| Cow position: | chr18:2849387-2849161 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 165-397 |
| Cow position: | chr18:19883414-19883646 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 57, 195 |
| Conread position: | 165-408 |
| Cow position: | chr18:42479703-42479460 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 207, 178 |
| Conread position: | 166-294 |
| Cow position: | chr18:29991628-29991498 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 166-370 |
| Cow position: | chr18:6309967-6310167 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 58, 40 |
| Conread position: | 166-380 |
| Cow position: | chr18:9974438-9974233 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 166-380 |
| Cow position: | chr18:11183831-11184036 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 167-398 |
| Cow position: | chr18:7076841-7077068 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 7, 60 |
| Conread position: | 168-382 |
| Cow position: | chr18:11313051-11312838 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 47, 127 |
| Conread position: | 171-345 |
| Cow position: | chr18:43797063-43796892 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 171-347 |
| Cow position: | chr18:51212071-51212248 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 39, 135 |
| Conread position: | 171-357 |
| Cow position: | chr18:11684871-11685057 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 149, 154 |
| Conread position: | 171-362 |
| Cow position: | chr18:3158711-3158515 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 171-371 |
| Cow position: | chr18:31711677-31711473 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 44, 183 |
| Conread position: | 171-376 |
| Cow position: | chr18:34527208-34527000 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 25 |
| Conread position: | 171-396 |
| Cow position: | chr18:4535125-4534911 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 116, 37 |
| Conread position: | 171-397 |
| Cow position: | chr18:19896564-19896338 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 53, 127 |
| Conread position: | 173-369 |
| Cow position: | chr18:12242167-12242360 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 53, 111 |
| Conread position: | 173-370 |
| Cow position: | chr18:10977320-10977125 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 44, 112 |
| Conread position: | 175-362 |
| Cow position: | chr18:28930745-28930557 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 42, 186 |
| Conread position: | 175-362 |
| Cow position: | chr18:30794321-30794506 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 42, 23 |
| Conread position: | 177-419 |
| Cow position: | chr18:53038723-53038971 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 178-407 |
| Cow position: | chr18:49324526-49324317 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 182-319 |
| Cow position: | chr18:15880946-15880807 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 182-408 |
| Cow position: | chr18:39623702-39623924 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 138, 36 |
| Conread position: | 184-360 |
| Cow position: | chr18:29759930-29760105 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 38, 59 |
| Conread position: | 184-362 |
| Cow position: | chr18:15613952-15613780 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 144, 29 |
| Conread position: | 184-362 |
| Cow position: | chr18:17660654-17660480 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 144, 34 |
| Conread position: | 184-363 |
| Cow position: | chr18:35367283-35367114 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 156, 29 |
| Conread position: | 184-368 |
| Cow position: | chr18:22569164-22568981 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 184-382 |
| Cow position: | chr18:11790825-11791019 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 34, 104 |
| Conread position: | 184-392 |
| Cow position: | chr18:46727491-46727698 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 184-397 |
| Cow position: | chr18:4796874-4797079 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 43 |
| Conread position: | 184-398 |
| Cow position: | chr18:22790185-22789970 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 5, 69 |
| Conread position: | 184-398 |
| Cow position: | chr18:25598338-25598113 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 184-408 |
| Cow position: | chr18:35535247-35535027 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 20, 48 |
| Conread position: | 185-324 |
| Cow position: | chr18:49015030-49015167 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 42, 102 |
| Conread position: | 185-364 |
| Cow position: | chr18:10891418-10891596 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 39, 21 |
| Conread position: | 185-378 |
| Cow position: | chr18:32189607-32189415 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 37, 167 |
| Conread position: | 186-407 |
| Cow position: | chr18:32252264-32252044 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 32, 44 |
| Conread position: | 189-367 |
| Cow position: | chr18:56301798-56301977 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 37, 107 |
| Conread position: | 191-397 |
| Cow position: | chr18:9176811-9177010 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 35, 81 |
| Conread position: | 199-380 |
| Cow position: | chr18:14830926-14830755 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 201-407 |
| Cow position: | chr18:52413883-52414093 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 208-408 |
| Cow position: | chr18:31082421-31082223 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 209-363 |
| Cow position: | chr18:23505257-23505412 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 209-397 |
| Cow position: | chr18:47705162-47705347 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 213-374 |
| Cow position: | chr18:47548056-47547897 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 10, 121 |
| Conread position: | 213-380 |
| Cow position: | chr18:38937755-38937917 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 215-354 |
| Cow position: | chr18:25006560-25006421 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 218-416 |
| Cow position: | chr18:45637477-45637282 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 15, 67 |
| Conread position: | 222-419 |
| Cow position: | chr18:21081951-21081755 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 224-380 |
| Cow position: | chr18:44917699-44917855 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 225-408 |
| Cow position: | chr18:2773449-2773267 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 173, 133 |
| Conread position: | 225-408 |
| Cow position: | chr18:2776952-2776770 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 173, 130 |
| Conread position: | 226-369 |
| Cow position: | chr18:16378867-16379011 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 229-396 |
| Cow position: | chr18:2765200-2765365 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 149, 24 |
| Conread position: | 234-380 |
| Cow position: | chr18:50632490-50632347 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 241-420 |
| Cow position: | chr18:11672002-11672176 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
Show alignments to all cow chromosomes.