Cow genome map

Conread name: Ss1.1-rplun0130_c23.5

Conread position: 88-408
Cow position:
Alignm length: 339
Alignm identity: 221
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 30, 20

Conread position: 97-381
Cow position:
Alignm length: 289
Alignm identity: 197
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 44, 13

Conread position: 103-375
Cow position:
Alignm length: 273
Alignm identity: 183
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 122-305
Cow position:
Alignm length: 188
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 122-329
Cow position:
Alignm length: 209
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 47

Conread position: 122-347
Cow position:
Alignm length: 229
Alignm identity: 154
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 20, 148

Conread position: 122-368
Cow position:
Alignm length: 249
Alignm identity: 168
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 27, 99

Conread position: 122-370
Cow position:
Alignm length: 249
Alignm identity: 176
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 122-373
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 19, 64

Conread position: 122-380
Cow position:
Alignm length: 263
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 31

Conread position: 122-396
Cow position:
Alignm length: 278
Alignm identity: 190
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 57

Conread position: 122-398
Cow position:
Alignm length: 286
Alignm identity: 194
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 173

Conread position: 123-323
Cow position:
Alignm length: 202
Alignm identity: 146
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 136, 31

Conread position: 123-408
Cow position:
Alignm length: 298
Alignm identity: 210
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 43, 18

Conread position: 124-374
Cow position:
Alignm length: 256
Alignm identity: 172
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 61

Conread position: 132-318
Cow position:
Alignm length: 192
Alignm identity: 135
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 10, 161

Conread position: 132-346
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 88, 39

Conread position: 132-380
Cow position:
Alignm length: 256
Alignm identity: 185
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 132-408
Cow position:
Alignm length: 279
Alignm identity: 197
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 57, 22

Conread position: 134-317
Cow position:
Alignm length: 187
Alignm identity: 131
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 7, 75

Conread position: 134-334
Cow position:
Alignm length: 205
Alignm identity: 151
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 31, 66

Conread position: 139-378
Cow position:
Alignm length: 240
Alignm identity: 166
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 140-408
Cow position:
Alignm length: 280
Alignm identity: 196
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 23, 36

Conread position: 145-306
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 71, 24

Conread position: 146-359
Cow position:
Alignm length: 216
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 75

Conread position: 146-369
Cow position:
Alignm length: 226
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 27, 70

Conread position: 146-396
Cow position:
Alignm length: 255
Alignm identity: 173
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 12, 216

Conread position: 146-397
Cow position:
Alignm length: 262
Alignm identity: 192
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 28, 148

Conread position: 156-369
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 60, 18

Conread position: 157-367
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 159-362
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 160-286
Cow position:
Alignm length: 128
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 9

Conread position: 160-319
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 160-319
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 9

Conread position: 160-324
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 66, 13

Conread position: 160-334
Cow position:
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 9

Conread position: 160-334
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 160-341
Cow position:
Alignm length: 183
Alignm identity: 129
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 57, 9

Conread position: 160-344
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 9

Conread position: 160-346
Cow position:
Alignm length: 195
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 12

Conread position: 160-346
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 60, 9

Conread position: 160-359
Cow position:
Alignm length: 202
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 9

Conread position: 160-362
Cow position:
Alignm length: 207
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 9

Conread position: 160-366
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 160-367
Cow position:
Alignm length: 211
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 8

Conread position: 160-368
Cow position:
Alignm length: 210
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 9

Conread position: 160-368
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 160-370
Cow position:
Alignm length: 215
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 9

Conread position: 160-370
Cow position:
Alignm length: 211
Alignm identity: 159
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 9, 0

Conread position: 160-374
Cow position:
Alignm length: 219
Alignm identity: 145
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 160-374
Cow position:
Alignm length: 220
Alignm identity: 159
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 64, 9

Conread position: 160-376
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 160-381
Cow position:
Alignm length: 233
Alignm identity: 162
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 9

Conread position: 160-382
Cow position:
Alignm length: 224
Alignm identity: 164
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 58, 13

Conread position: 160-382
Cow position:
Alignm length: 224
Alignm identity: 166
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 57, 9

Conread position: 160-382
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 160-386
Cow position:
Alignm length: 227
Alignm identity: 159
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 160-388
Cow position:
Alignm length: 234
Alignm identity: 156
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 54, 9

Conread position: 160-392
Cow position:
Alignm length: 233
Alignm identity: 171
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 160-406
Cow position:
Alignm length: 250
Alignm identity: 166
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 57, 8

Conread position: 160-407
Cow position:
Alignm length: 249
Alignm identity: 164
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 208, 9

Conread position: 160-408
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 30, 9

Conread position: 160-408
Cow position:
Alignm length: 254
Alignm identity: 179
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 72, 9

Conread position: 162-362
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 162-364
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 5, 26

Conread position: 162-380
Cow position:
Alignm length: 220
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 64, 175

Conread position: 162-408
Cow position:
Alignm length: 248
Alignm identity: 168
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 55, 149

Conread position: 164-344
Cow position:
Alignm length: 185
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 62

Conread position: 164-347
Cow position:
Alignm length: 186
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 164-354
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 164-367
Cow position:
Alignm length: 204
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 164-376
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 54, 62

Conread position: 164-382
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 192, 0

Conread position: 165-347
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 165-354
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 18

Conread position: 165-354
Cow position:
Alignm length: 190
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 165-359
Cow position:
Alignm length: 196
Alignm identity: 144
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 155, 132

Conread position: 165-366
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 56, 147

Conread position: 165-367
Cow position:
Alignm length: 203
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 165-374
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 193, 0

Conread position: 165-376
Cow position:
Alignm length: 214
Alignm identity: 160
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 47, 196

Conread position: 165-380
Cow position:
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 64, 144

Conread position: 165-390
Cow position:
Alignm length: 227
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 165-397
Cow position:
Alignm length: 235
Alignm identity: 156
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 57, 195

Conread position: 165-408
Cow position:
Alignm length: 246
Alignm identity: 171
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 207, 178

Conread position: 166-294
Cow position:
Alignm length: 131
Alignm identity: 100
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 166-370
Cow position:
Alignm length: 208
Alignm identity: 145
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 58, 40

Conread position: 166-380
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 166-380
Cow position:
Alignm length: 215
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 167-398
Cow position:
Alignm length: 234
Alignm identity: 174
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 7, 60

Conread position: 168-382
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 47, 127

Conread position: 171-345
Cow position:
Alignm length: 175
Alignm identity: 136
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 47, 0

Conread position: 171-347
Cow position:
Alignm length: 179
Alignm identity: 127
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 39, 135

Conread position: 171-357
Cow position:
Alignm length: 188
Alignm identity: 144
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 149, 154

Conread position: 171-362
Cow position:
Alignm length: 199
Alignm identity: 139
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 43, 71

Conread position: 171-371
Cow position:
Alignm length: 206
Alignm identity: 156
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 44, 183

Conread position: 171-376
Cow position:
Alignm length: 212
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 25

Conread position: 171-396
Cow position:
Alignm length: 227
Alignm identity: 161
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 116, 37

Conread position: 171-397
Cow position:
Alignm length: 230
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 127

Conread position: 173-369
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 53, 111

Conread position: 173-370
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 44, 112

Conread position: 175-362
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 186

Conread position: 175-362
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 23

Conread position: 177-419
Cow position:
Alignm length: 249
Alignm identity: 171
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 178-407
Cow position:
Alignm length: 230
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 182-319
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 182-408
Cow position:
Alignm length: 228
Alignm identity: 154
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 138, 36

Conread position: 184-360
Cow position:
Alignm length: 178
Alignm identity: 123
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 38, 59

Conread position: 184-362
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 144, 29

Conread position: 184-362
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 144, 34

Conread position: 184-363
Cow position:
Alignm length: 181
Alignm identity: 133
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 156, 29

Conread position: 184-368
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 176, 0

Conread position: 184-382
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 34, 104

Conread position: 184-392
Cow position:
Alignm length: 209
Alignm identity: 137
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 158, 0

Conread position: 184-397
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 43

Conread position: 184-398
Cow position:
Alignm length: 219
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 5, 69

Conread position: 184-398
Cow position:
Alignm length: 226
Alignm identity: 155
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 184-408
Cow position:
Alignm length: 229
Alignm identity: 167
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 20, 48

Conread position: 185-324
Cow position:
Alignm length: 142
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 102

Conread position: 185-364
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 39, 21

Conread position: 185-378
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 37, 167

Conread position: 186-407
Cow position:
Alignm length: 224
Alignm identity: 157
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 32, 44

Conread position: 189-367
Cow position:
Alignm length: 182
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 37, 107

Conread position: 191-397
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 81

Conread position: 199-380
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 201-407
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 208-408
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 209-363
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 209-397
Cow position:
Alignm length: 189
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 149, 0

Conread position: 213-374
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 121

Conread position: 213-380
Cow position:
Alignm length: 168
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 215-354
Cow position:
Alignm length: 140
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 218-416
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 67

Conread position: 222-419
Cow position:
Alignm length: 198
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 224-380
Cow position:
Alignm length: 157
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 225-408
Cow position:
Alignm length: 185
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 173, 133

Conread position: 225-408
Cow position:
Alignm length: 185
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 173, 130

Conread position: 226-369
Cow position:
Alignm length: 145
Alignm identity: 106
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 130, 0

Conread position: 229-396
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 149, 24

Conread position: 234-380
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 241-420
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 62, 0

Show alignments to all cow chromosomes.