Cow genome map

Conread name: Ss1.1-rplun0130_c23.5

Conread position: 108-396
Cow position:
Alignm length: 290
Alignm identity: 202
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 16, 10

Conread position: 122-286
Cow position:
Alignm length: 167
Alignm identity: 119
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 122-354
Cow position:
Alignm length: 234
Alignm identity: 156
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 19, 52

Conread position: 122-368
Cow position:
Alignm length: 253
Alignm identity: 172
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 146

Conread position: 122-372
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 19, 30

Conread position: 122-376
Cow position:
Alignm length: 257
Alignm identity: 173
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 19, 99

Conread position: 122-407
Cow position:
Alignm length: 295
Alignm identity: 197
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 196

Conread position: 124-354
Cow position:
Alignm length: 231
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 131-377
Cow position:
Alignm length: 251
Alignm identity: 173
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 91

Conread position: 132-354
Cow position:
Alignm length: 225
Alignm identity: 157
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 81, 51

Conread position: 132-356
Cow position:
Alignm length: 228
Alignm identity: 156
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 41, 98

Conread position: 132-370
Cow position:
Alignm length: 244
Alignm identity: 173
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 42, 66

Conread position: 132-376
Cow position:
Alignm length: 254
Alignm identity: 173
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 143

Conread position: 132-380
Cow position:
Alignm length: 249
Alignm identity: 170
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 132-380
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 9, 159

Conread position: 132-405
Cow position:
Alignm length: 274
Alignm identity: 185
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 134-334
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 7, 0

Conread position: 134-361
Cow position:
Alignm length: 232
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 134-382
Cow position:
Alignm length: 257
Alignm identity: 169
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 7, 157

Conread position: 136-372
Cow position:
Alignm length: 242
Alignm identity: 170
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 5, 120

Conread position: 140-381
Cow position:
Alignm length: 246
Alignm identity: 172
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 32, 47

Conread position: 143-352
Cow position:
Alignm length: 215
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 19

Conread position: 143-377
Cow position:
Alignm length: 236
Alignm identity: 156
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 182, 75

Conread position: 144-362
Cow position:
Alignm length: 219
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 144-408
Cow position:
Alignm length: 267
Alignm identity: 172
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 205, 73

Conread position: 146-354
Cow position:
Alignm length: 213
Alignm identity: 141
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 146-368
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 83

Conread position: 146-371
Cow position:
Alignm length: 232
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 216

Conread position: 146-380
Cow position:
Alignm length: 240
Alignm identity: 173
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 28, 185

Conread position: 146-380
Cow position:
Alignm length: 235
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 150-408
Cow position:
Alignm length: 267
Alignm identity: 178
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 80

Conread position: 154-370
Cow position:
Alignm length: 217
Alignm identity: 148
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 128, 0

Conread position: 155-382
Cow position:
Alignm length: 231
Alignm identity: 154
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 52, 203

Conread position: 155-408
Cow position:
Alignm length: 256
Alignm identity: 167
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 70

Conread position: 156-347
Cow position:
Alignm length: 192
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 157-362
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 84

Conread position: 160-303
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 52, 9

Conread position: 160-314
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 160-315
Cow position:
Alignm length: 157
Alignm identity: 113
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 66, 9

Conread position: 160-330
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 160-334
Cow position:
Alignm length: 176
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 9

Conread position: 160-346
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 9

Conread position: 160-347
Cow position:
Alignm length: 188
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 160-361
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 67, 9

Conread position: 160-361
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 160-362
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 61, 11

Conread position: 160-366
Cow position:
Alignm length: 208
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 121, 9

Conread position: 160-367
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 66, 9

Conread position: 160-367
Cow position:
Alignm length: 210
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 9

Conread position: 160-368
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 51, 9

Conread position: 160-368
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 160-369
Cow position:
Alignm length: 213
Alignm identity: 146
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 30, 9

Conread position: 160-370
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 9

Conread position: 160-371
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 39

Conread position: 160-372
Cow position:
Alignm length: 213
Alignm identity: 150
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 160-374
Cow position:
Alignm length: 216
Alignm identity: 161
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 60, 9

Conread position: 160-378
Cow position:
Alignm length: 222
Alignm identity: 154
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 60, 9

Conread position: 160-380
Cow position:
Alignm length: 221
Alignm identity: 161
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 160-380
Cow position:
Alignm length: 223
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 9

Conread position: 160-380
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 9

Conread position: 160-380
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 58, 9

Conread position: 160-380
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 9

Conread position: 160-386
Cow position:
Alignm length: 228
Alignm identity: 161
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 58, 9

Conread position: 160-396
Cow position:
Alignm length: 237
Alignm identity: 167
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 160-408
Cow position:
Alignm length: 251
Alignm identity: 170
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 8

Conread position: 160-408
Cow position:
Alignm length: 251
Alignm identity: 175
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 55, 17

Conread position: 160-408
Cow position:
Alignm length: 250
Alignm identity: 178
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 55, 9

Conread position: 160-408
Cow position:
Alignm length: 251
Alignm identity: 165
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 235, 9

Conread position: 160-419
Cow position:
Alignm length: 263
Alignm identity: 182
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 63, 9

Conread position: 164-280
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 164-362
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 164-368
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 54, 147

Conread position: 164-368
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 55, 128

Conread position: 164-378
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 44, 17

Conread position: 164-408
Cow position:
Alignm length: 248
Alignm identity: 176
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 64, 235

Conread position: 165-368
Cow position:
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 195

Conread position: 165-372
Cow position:
Alignm length: 208
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 165-374
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 192

Conread position: 165-379
Cow position:
Alignm length: 217
Alignm identity: 147
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 197

Conread position: 165-380
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 165-380
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 165-380
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 55, 18

Conread position: 165-380
Cow position:
Alignm length: 217
Alignm identity: 152
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 55, 18

Conread position: 165-380
Cow position:
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 165-382
Cow position:
Alignm length: 218
Alignm identity: 153
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 165-383
Cow position:
Alignm length: 219
Alignm identity: 151
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 145, 0

Conread position: 165-388
Cow position:
Alignm length: 229
Alignm identity: 158
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 18

Conread position: 165-396
Cow position:
Alignm length: 235
Alignm identity: 164
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 124

Conread position: 165-396
Cow position:
Alignm length: 237
Alignm identity: 159
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 96, 198

Conread position: 165-397
Cow position:
Alignm length: 237
Alignm identity: 160
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 16, 197

Conread position: 165-398
Cow position:
Alignm length: 241
Alignm identity: 162
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 55, 18

Conread position: 165-406
Cow position:
Alignm length: 245
Alignm identity: 174
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 123, 34

Conread position: 166-309
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 54, 114

Conread position: 166-418
Cow position:
Alignm length: 257
Alignm identity: 174
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 217, 40

Conread position: 169-344
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 170-408
Cow position:
Alignm length: 243
Alignm identity: 169
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 62, 157

Conread position: 171-337
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 107

Conread position: 171-369
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 171-376
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 101, 72

Conread position: 171-380
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 172-305
Cow position:
Alignm length: 137
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 172-380
Cow position:
Alignm length: 211
Alignm identity: 159
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 46, 24

Conread position: 172-380
Cow position:
Alignm length: 211
Alignm identity: 159
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 46, 24

Conread position: 172-396
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 172-407
Cow position:
Alignm length: 242
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 191

Conread position: 173-370
Cow position:
Alignm length: 200
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 164

Conread position: 173-376
Cow position:
Alignm length: 204
Alignm identity: 144
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 176, 0

Conread position: 174-354
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 37, 83

Conread position: 175-368
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 22

Conread position: 176-404
Cow position:
Alignm length: 231
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 196, 76

Conread position: 177-372
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 178-387
Cow position:
Alignm length: 211
Alignm identity: 144
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 152, 41

Conread position: 179-408
Cow position:
Alignm length: 234
Alignm identity: 159
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 109

Conread position: 180-390
Cow position:
Alignm length: 212
Alignm identity: 158
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 35, 16

Conread position: 181-368
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 184-364
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 83, 0

Conread position: 184-370
Cow position:
Alignm length: 193
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 184-379
Cow position:
Alignm length: 196
Alignm identity: 146
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 186-407
Cow position:
Alignm length: 224
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 174

Conread position: 190-370
Cow position:
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 190-386
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 74

Conread position: 198-366
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 166, 15

Conread position: 200-346
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 60

Conread position: 201-370
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 22, 0

Conread position: 205-378
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 16, 0

Conread position: 205-419
Cow position:
Alignm length: 216
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 205, 161

Conread position: 209-318
Cow position:
Alignm length: 110
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 215-362
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 217-398
Cow position:
Alignm length: 184
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 135, 167

Conread position: 218-361
Cow position:
Alignm length: 144
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 218-389
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 219-349
Cow position:
Alignm length: 131
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 220-380
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 138, 0

Conread position: 225-347
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 226-396
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 113, 8

Conread position: 229-370
Cow position:
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 234-408
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 158, 46

Conread position: 237-408
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 16, 80

Conread position: 247-368
Cow position:
Alignm length: 122
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 255-408
Cow position:
Alignm length: 154
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 0

Show alignments to all cow chromosomes.