Cow genome map

Conread name: Ss1.1-rplun0130_c23.5

Conread position: 119-309
Cow position: chr20:23505741-23505931 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 22

Conread position: 122-347
Cow position: chr20:33363432-33363659 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 19, 54

Conread position: 122-354
Cow position: chr20:23792526-23792752 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 31

Conread position: 122-368
Cow position: chr20:38768541-38768301 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 91

Conread position: 122-370
Cow position: chr20:11542368-11542119 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 52, 19

Conread position: 122-379
Cow position: chr20:6240606-6240348 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 165
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 190

Conread position: 122-389
Cow position: chr20:39398401-39398662 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 19, 98

Conread position: 122-419
Cow position: chr20:41883651-41883947 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 198
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 44, 71

Conread position: 132-408
Cow position: chr20:26996457-26996730 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 187
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 87

Conread position: 134-361
Cow position: chr20:9433515-9433742 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 148
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 32, 7

Conread position: 134-378
Cow position: chr20:28605131-28605379 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 7, 155

Conread position: 146-304
Cow position: chr20:21204297-21204456 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 60

Conread position: 146-363
Cow position: chr20:7738289-7738075 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 27, 64

Conread position: 146-376
Cow position: chr20:12239746-12239513 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 23

Conread position: 146-382
Cow position: chr20:10200285-10200522 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 73, 23

Conread position: 146-386
Cow position: chr20:29844988-29845228 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 28, 193

Conread position: 154-372
Cow position: chr20:5702671-5702888 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 27, 34

Conread position: 157-373
Cow position: chr20:398351-398140 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 56, 12

Conread position: 159-408
Cow position: chr20:5998717-5998461 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 129, 10

Conread position: 160-312
Cow position: chr20:38817962-38818106 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 160-317
Cow position: chr20:8702961-8702806 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 60, 9

Conread position: 160-318
Cow position: chr20:31740265-31740107 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 57, 12

Conread position: 160-334
Cow position: chr20:7624290-7624120 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 105, 9

Conread position: 160-334
Cow position: chr20:23506513-23506342 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 160-347
Cow position: chr20:7210996-7211175 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 160-347
Cow position: chr20:22265289-22265111 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 160-347
Cow position: chr20:39267003-39266817 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 58, 81

Conread position: 160-354
Cow position: chr20:19363407-19363215 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 59, 9

Conread position: 160-356
Cow position: chr20:8307975-8308166 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 160-362
Cow position: chr20:23846713-23846508 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 39, 9

Conread position: 160-362
Cow position: chr20:36207761-36207970 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 57, 9

Conread position: 160-365
Cow position: chr20:8556314-8556110 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 9

Conread position: 160-367
Cow position: chr20:10772160-10772366 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 58, 9

Conread position: 160-368
Cow position: chr20:4787057-4786858 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 64, 9

Conread position: 160-370
Cow position: chr20:12582000-12581793 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 57, 9

Conread position: 160-370
Cow position: chr20:40177202-40177407 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 160-378
Cow position: chr20:9412445-9412658 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 57, 9

Conread position: 160-378
Cow position: chr20:25162172-25161957 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 64, 9

Conread position: 160-378
Cow position: chr20:28982655-28982871 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 57, 9

Conread position: 160-380
Cow position: chr20:11550322-11550539 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 9

Conread position: 160-380
Cow position: chr20:38514738-38514952 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 9, 0

Conread position: 160-398
Cow position: chr20:32463565-32463329 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 198, 9

Conread position: 160-399
Cow position: chr20:24069760-24069997 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 53, 15

Conread position: 160-409
Cow position: chr20:38089868-38090113 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 182, 12

Conread position: 162-347
Cow position: chr20:30887988-30888176 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 7, 52

Conread position: 163-397
Cow position: chr20:40157859-40158093 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 199, 62

Conread position: 164-332
Cow position: chr20:19459708-19459539 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 164-334
Cow position: chr20:21428119-21428290 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 164-362
Cow position: chr20:8547024-8547222 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 52, 133

Conread position: 164-363
Cow position: chr20:34777139-34777336 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 164-367
Cow position: chr20:18320832-18320634 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 60, 70

Conread position: 164-369
Cow position: chr20:7426235-7426036 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 164-378
Cow position: chr20:3255003-3255207 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 176, 53

Conread position: 164-378
Cow position: chr20:18379335-18379550 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 51, 146

Conread position: 165-333
Cow position: chr20:3607002-3606834 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 55, 122

Conread position: 165-346
Cow position: chr20:8578208-8578389 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 45, 60

Conread position: 165-347
Cow position: chr20:14806846-14807028 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 165-352
Cow position: chr20:17100321-17100508 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 124

Conread position: 165-367
Cow position: chr20:40511798-40511595 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 78

Conread position: 165-368
Cow position: chr20:22030280-22030478 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 162

Conread position: 165-369
Cow position: chr20:7438893-7438688 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 165-387
Cow position: chr20:12420659-12420439 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 141, 0

Conread position: 165-408
Cow position: chr20:15548940-15548693 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 46, 171

Conread position: 166-388
Cow position: chr20:22978288-22978507 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 47, 14

Conread position: 171-345
Cow position: chr20:21999964-22000141 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 119

Conread position: 171-351
Cow position: chr20:20203182-20203363 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 173-356
Cow position: chr20:32084113-32083932 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 106

Conread position: 175-376
Cow position: chr20:21815531-21815729 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 49, 21

Conread position: 178-347
Cow position: chr20:6358588-6358761 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 55

Conread position: 184-318
Cow position: chr20:26723695-26723566 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 184-321
Cow position: chr20:35354844-35354704 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 184-347
Cow position: chr20:28441308-28441468 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 184-364
Cow position: chr20:7756645-7756467 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 37, 23

Conread position: 184-376
Cow position: chr20:22065048-22065234 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 81

Conread position: 188-341
Cow position: chr20:1009722-1009571 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 192-376
Cow position: chr20:13269609-13269785 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 193-416
Cow position: chr20:11043489-11043265 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 25, 102

Conread position: 196-395
Cow position: chr20:32847333-32847532 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 164

Conread position: 204-374
Cow position: chr20:2298788-2298622 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 114, 0

Conread position: 205-376
Cow position: chr20:20158132-20158304 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 156

Conread position: 207-408
Cow position: chr20:2819546-2819744 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 208-380
Cow position: chr20:16935308-16935142 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 210-380
Cow position: chr20:25009627-25009460 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 211-357
Cow position: chr20:26077662-26077517 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 214-380
Cow position: chr20:3148692-3148856 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 144, 0

Conread position: 216-386
Cow position: chr20:15529870-15530038 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 5, 83

Conread position: 219-364
Cow position: chr20:24097014-24097159 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 222-382
Cow position: chr20:15766127-15766287 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 10

Show alignments to all cow chromosomes.