Cow genome map


           Conread name:
           Ss1.1-rplun0130_c23.5
        

               Conread position:
               122-408
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               20, 48
               

               Conread position:
               131-358
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               81, 53
               

               Conread position:
               132-316
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               40, 56
               

               Conread position:
               132-357
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               83, 30
               

               Conread position:
               132-370
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               132-370
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               132-380
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               46, 93
               

               Conread position:
               134-378
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               140-347
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               26, 42
               

               Conread position:
               144-306
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               20, 70
               

               Conread position:
               144-407
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               28, 16
               

               Conread position:
               146-340
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               28, 131
               

               Conread position:
               146-372
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               26, 205
               

               Conread position:
               147-369
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               38, 143
               

               Conread position:
               154-398
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               31, 70
               

               Conread position:
               159-306
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               160-318
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               66, 9
               

               Conread position:
               160-324
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               50, 9
               

               Conread position:
               160-347
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               55, 9
               

               Conread position:
               160-347
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               56, 23
               

               Conread position:
               160-354
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               48, 9
               

               Conread position:
               160-362
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               53, 9
               

               Conread position:
               160-367
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               50, 9
               

               Conread position:
               160-368
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               57, 9
               

               Conread position:
               160-368
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               160-371
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               68, 14
               

               Conread position:
               160-373
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               56, 9
               

               Conread position:
               160-378
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               50, 8
               

               Conread position:
               160-380
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               60, 8
               

               Conread position:
               160-380
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               160-381
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               61, 9
               

               Conread position:
               160-382
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               56, 9
               

               Conread position:
               160-390
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               160-391
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               63, 13
               

               Conread position:
               160-398
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               160-407
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               69, 9
               

               Conread position:
               160-407
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               8, 14
               

               Conread position:
               162-356
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               58, 12
               

               Conread position:
               164-346
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               49, 163
               

               Conread position:
               164-358
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               164-370
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               166, 47
               

               Conread position:
               164-374
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               164-378
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               164-378
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               58, 24
               

               Conread position:
               165-356
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               155, 31
               

               Conread position:
               165-364
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               52, 27
               

               Conread position:
               165-372
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               51, 199
               

               Conread position:
               165-376
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               55, 145
               

               Conread position:
               165-392
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               165-408
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               166-340
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               60, 154
               

               Conread position:
               171-307
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               47, 117
               

               Conread position:
               171-386
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               173-319
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               173-419
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               175-356
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               39, 55
               

               Conread position:
               178-380
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               37, 76
               

               Conread position:
               178-398
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               217, 40
               

               Conread position:
               178-407
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               46, 111
               

               Conread position:
               179-376
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               43, 19
               

               Conread position:
               183-408
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               180, 82
               

               Conread position:
               184-372
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               25, 155
               

               Conread position:
               184-372
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               27, 111
               

               Conread position:
               184-380
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               32, 175
               

               Conread position:
               184-382
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               37, 84
               

               Conread position:
               185-304
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               185-380
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               33, 93
               

               Conread position:
               185-408
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               190-363
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 99
               

               Conread position:
               192-364
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               193-380
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               208-396
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               213-398
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               182, 9
               

               Conread position:
               216-385
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               11, 18
               

               Conread position:
               220-378
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               220-380
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               140, 0
               
Show alignments to all cow chromosomes.