Cow genome map


           Conread name:
           Ss1.1-rplun0130_c23.5
        

               Conread position:
               122-310
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               44, 92
               

               Conread position:
               122-345
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               70, 19
               

               Conread position:
               123-382
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               18, 239
               

               Conread position:
               124-347
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               23, 131
               

               Conread position:
               132-354
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               83, 156
               

               Conread position:
               132-366
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               42, 68
               

               Conread position:
               132-368
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               21, 229
               

               Conread position:
               132-372
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               88, 31
               

               Conread position:
               135-362
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               16, 124
               

               Conread position:
               136-408
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               5, 73
               

               Conread position:
               137-370
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               52, 36
               

               Conread position:
               139-317
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               75, 30
               

               Conread position:
               139-376
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               141-370
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               25, 17
               

               Conread position:
               141-395
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               144-386
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               146-368
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               72, 122
               

               Conread position:
               146-408
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               219, 16
               

               Conread position:
               154-408
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 73
               

               Conread position:
               156-362
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               85, 27
               

               Conread position:
               159-370
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 75
               

               Conread position:
               160-311
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               64, 9
               

               Conread position:
               160-315
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               160-319
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               51, 9
               

               Conread position:
               160-334
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               57, 9
               

               Conread position:
               160-347
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               66, 9
               

               Conread position:
               160-355
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               160-363
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               67, 9
               

               Conread position:
               160-364
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               56, 9
               

               Conread position:
               160-364
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               160-367
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               77, 9
               

               Conread position:
               160-370
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               160-378
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               11, 65
               

               Conread position:
               160-380
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               160-380
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               179, 12
               

               Conread position:
               160-382
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               160-397
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               65, 9
               

               Conread position:
               160-398
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               204, 13
               

               Conread position:
               160-408
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               117, 9
               

               Conread position:
               162-368
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               54, 73
               

               Conread position:
               162-397
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               6, 130
               

               Conread position:
               164-374
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               164-382
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               156, 32
               

               Conread position:
               164-396
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 52
               

               Conread position:
               164-408
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               38, 204
               

               Conread position:
               164-419
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 242
               

               Conread position:
               165-361
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               165-361
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               46, 194
               

               Conread position:
               165-362
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               165-373
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               72, 186
               

               Conread position:
               165-376
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               165-378
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               47, 121
               

               Conread position:
               165-378
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               165-390
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               165-398
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               48, 195
               

               Conread position:
               165-405
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               165-408
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               62, 193
               

               Conread position:
               165-418
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               55, 218
               

               Conread position:
               166-372
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               52, 191
               

               Conread position:
               166-374
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               53, 193
               

               Conread position:
               166-380
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               171-370
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               174, 52
               

               Conread position:
               171-380
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               51, 116
               

               Conread position:
               172-415
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               46, 27
               

               Conread position:
               173-347
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               173-384
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               174-356
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               174-378
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               125, 154
               

               Conread position:
               175-354
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               175-368
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               175-368
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               40, 189
               

               Conread position:
               175-368
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               179-347
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               39, 132
               

               Conread position:
               183-378
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               31, 177
               

               Conread position:
               184-362
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               34, 12
               

               Conread position:
               184-362
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               184-370
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               180, 35
               

               Conread position:
               184-374
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               32, 176
               

               Conread position:
               184-378
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               155, 28
               

               Conread position:
               184-380
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               184-397
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               184-408
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               32, 143
               

               Conread position:
               185-319
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               185-334
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               185-355
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               31, 109
               

               Conread position:
               185-368
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               37, 113
               

               Conread position:
               185-370
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               33, 11
               

               Conread position:
               188-380
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               158, 25
               

               Conread position:
               206-370
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               206-385
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               70, 156
               

               Conread position:
               207-408
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               191, 147
               

               Conread position:
               208-368
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               68, 152
               

               Conread position:
               208-380
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               93, 17
               

               Conread position:
               214-347
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               216-380
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               220-382
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               226-394
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               234-408
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               247-368
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               72, 76
               
Show alignments to all cow chromosomes.