Cow genome map


           Conread name:
           Ss1.1-rplun0130_c23.5
        

               Conread position:
               122-345
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               100, 29
               

               Conread position:
               132-332
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               61, 32
               

               Conread position:
               132-380
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               78, 49
               

               Conread position:
               135-354
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               18, 28
               

               Conread position:
               146-372
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               174, 17
               

               Conread position:
               156-355
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               10, 72
               

               Conread position:
               157-347
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               158-378
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 69
               

               Conread position:
               159-354
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               62, 10
               

               Conread position:
               159-364
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               159-408
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               51, 111
               

               Conread position:
               160-319
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               55, 9
               

               Conread position:
               160-341
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               160-362
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               160-368
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               58, 9
               

               Conread position:
               160-372
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               57, 9
               

               Conread position:
               160-393
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               160-396
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               160-397
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               203, 9
               

               Conread position:
               164-368
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               56, 13
               

               Conread position:
               164-368
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 102
               

               Conread position:
               164-375
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               164-389
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               164-408
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               53, 105
               

               Conread position:
               165-354
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               165-362
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               47, 124
               

               Conread position:
               165-370
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               45, 194
               

               Conread position:
               165-386
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               166-379
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               166-416
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               50, 121
               

               Conread position:
               167-372
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               7, 63
               

               Conread position:
               168-370
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               169-378
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               170-380
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               171-333
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               171-398
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               43, 56
               

               Conread position:
               172-376
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               175-368
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               178-325
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               89, 69
               

               Conread position:
               178-380
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               175, 0
               

               Conread position:
               179-390
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               183-392
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               176, 0
               

               Conread position:
               184-294
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               184-362
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               184-376
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               42, 28
               

               Conread position:
               184-385
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               190, 51
               

               Conread position:
               185-362
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               185-368
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               33, 54
               

               Conread position:
               187-380
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               178, 25
               

               Conread position:
               190-370
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               27, 171
               

               Conread position:
               199-407
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               18, 162
               

               Conread position:
               201-380
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               21, 160
               

               Conread position:
               218-372
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               219-380
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               227-396
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               131, 0
               
Show alignments to all cow chromosomes.