Cow genome map
| Conread name: | Ss1.1-rplun0130_c23.5 |
| Conread position: | 122-345 |
| Cow position: | chr26:21637144-21636924 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 100, 29 |
| Conread position: | 132-332 |
| Cow position: | chr26:35704287-35704488 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 61, 32 |
| Conread position: | 132-380 |
| Cow position: | chr26:34724978-34724728 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 78, 49 |
| Conread position: | 135-354 |
| Cow position: | chr26:14481648-14481432 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 18, 28 |
| Conread position: | 146-372 |
| Cow position: | chr26:31137538-31137326 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 174, 17 |
| Conread position: | 156-355 |
| Cow position: | chr26:32955708-32955507 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 10, 72 |
| Conread position: | 157-347 |
| Cow position: | chr26:26888207-26888020 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 158-378 |
| Cow position: | chr26:33736628-33736409 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 69 |
| Conread position: | 159-354 |
| Cow position: | chr26:23924776-23924972 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 62, 10 |
| Conread position: | 159-364 |
| Cow position: | chr26:34060263-34060465 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 159-408 |
| Cow position: | chr26:19446053-19446307 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 51, 111 |
| Conread position: | 160-319 |
| Cow position: | chr26:32897941-32897782 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 55, 9 |
| Conread position: | 160-341 |
| Cow position: | chr26:8700117-8699938 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-362 |
| Cow position: | chr26:12145191-12144988 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 160-368 |
| Cow position: | chr26:31605336-31605540 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 58, 9 |
| Conread position: | 160-372 |
| Cow position: | chr26:12964766-12964559 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 57, 9 |
| Conread position: | 160-393 |
| Cow position: | chr26:23583016-23582785 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 160-396 |
| Cow position: | chr26:13021215-13020983 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-397 |
| Cow position: | chr26:678049-677813 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 203, 9 |
| Conread position: | 164-368 |
| Cow position: | chr26:22892512-22892311 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 56, 13 |
| Conread position: | 164-368 |
| Cow position: | chr26:26950519-26950322 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 102 |
| Conread position: | 164-375 |
| Cow position: | chr26:13802046-13802254 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 164-389 |
| Cow position: | chr26:7687307-7687089 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 164-408 |
| Cow position: | chr26:647793-647553 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 53, 105 |
| Conread position: | 165-354 |
| Cow position: | chr26:6514776-6514965 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 165-362 |
| Cow position: | chr26:27491567-27491371 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 47, 124 |
| Conread position: | 165-370 |
| Cow position: | chr26:20769783-20769987 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 45, 194 |
| Conread position: | 165-386 |
| Cow position: | chr26:9491860-9492075 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 52, 18 |
| Conread position: | 166-379 |
| Cow position: | chr26:23315705-23315921 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 166-416 |
| Cow position: | chr26:24240611-24240861 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 50, 121 |
| Conread position: | 167-372 |
| Cow position: | chr26:26537592-26537379 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 7, 63 |
| Conread position: | 168-370 |
| Cow position: | chr26:20291755-20291556 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 169-378 |
| Cow position: | chr26:9535455-9535660 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 170-380 |
| Cow position: | chr26:8307585-8307380 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 171-333 |
| Cow position: | chr26:22033422-22033585 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 171-398 |
| Cow position: | chr26:19774361-19774130 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 56 |
| Conread position: | 172-376 |
| Cow position: | chr26:28251091-28251301 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 175-368 |
| Cow position: | chr26:33202125-33201934 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 178-325 |
| Cow position: | chr26:18651687-18651543 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 89, 69 |
| Conread position: | 178-380 |
| Cow position: | chr26:19110130-19110330 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 179-390 |
| Cow position: | chr26:28423234-28423442 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 183-392 |
| Cow position: | chr26:14175233-14175443 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 184-294 |
| Cow position: | chr26:5307094-5307205 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 184-362 |
| Cow position: | chr26:18741107-18740927 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 184-376 |
| Cow position: | chr26:19591435-19591625 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 42, 28 |
| Conread position: | 184-385 |
| Cow position: | chr26:32652781-32652582 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 190, 51 |
| Conread position: | 185-362 |
| Cow position: | chr26:12940359-12940530 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 185-368 |
| Cow position: | chr26:33392347-33392528 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 33, 54 |
| Conread position: | 187-380 |
| Cow position: | chr26:5836864-5836671 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 178, 25 |
| Conread position: | 190-370 |
| Cow position: | chr26:19636249-19636430 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 27, 171 |
| Conread position: | 199-407 |
| Cow position: | chr26:7314586-7314797 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 18, 162 |
| Conread position: | 201-380 |
| Cow position: | chr26:7212618-7212438 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 160 |
| Conread position: | 218-372 |
| Cow position: | chr26:34611195-34611042 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 219-380 |
| Cow position: | chr26:11875233-11875075 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 227-396 |
| Cow position: | chr26:33241884-33242051 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 131, 0 |
Show alignments to all cow chromosomes.