Cow genome map


           Conread name:
           Ss1.1-rplun0130_c23.5
        

               Conread position:
               121-370
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               51, 149
               

               Conread position:
               122-315
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 93
               

               Conread position:
               122-370
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               88, 21
               

               Conread position:
               122-370
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               57, 19
               

               Conread position:
               122-380
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               57, 19
               

               Conread position:
               122-380
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               67, 19
               

               Conread position:
               122-390
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               198
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               52, 29
               

               Conread position:
               122-397
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               273, 19
               

               Conread position:
               123-406
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               109, 18
               

               Conread position:
               131-347
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               43, 164
               

               Conread position:
               132-326
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               42, 175
               

               Conread position:
               132-357
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               80, 31
               

               Conread position:
               132-376
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               132-377
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               49, 236
               

               Conread position:
               134-330
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 65
               

               Conread position:
               134-354
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               7, 67
               

               Conread position:
               139-334
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               27, 144
               

               Conread position:
               140-372
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               143-357
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               144-363
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               38, 27
               

               Conread position:
               146-378
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               75, 37
               

               Conread position:
               154-306
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 138
               

               Conread position:
               154-408
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               18, 71
               

               Conread position:
               159-318
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               7, 162
               

               Conread position:
               159-380
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               157, 10
               

               Conread position:
               159-382
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               12, 62
               

               Conread position:
               160-310
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               60, 9
               

               Conread position:
               160-317
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               67, 9
               

               Conread position:
               160-319
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               61, 9
               

               Conread position:
               160-347
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               160-347
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               57, 9
               

               Conread position:
               160-354
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               160-368
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               160-369
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               160-370
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               67, 9
               

               Conread position:
               160-373
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               69, 9
               

               Conread position:
               160-376
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               61, 9
               

               Conread position:
               160-377
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               46, 9
               

               Conread position:
               160-378
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               57, 9
               

               Conread position:
               160-382
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               39, 9
               

               Conread position:
               160-383
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               8, 186
               

               Conread position:
               160-386
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               160-395
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               8, 50
               

               Conread position:
               160-397
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               57, 9
               

               Conread position:
               161-365
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               164-334
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               164-374
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               56, 9
               

               Conread position:
               164-375
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               31, 57
               

               Conread position:
               164-376
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               164-394
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               52, 125
               

               Conread position:
               164-396
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               15, 83
               

               Conread position:
               165-333
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               165-372
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               50, 194
               

               Conread position:
               165-408
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               230, 123
               

               Conread position:
               165-419
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               55, 185
               

               Conread position:
               166-355
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               52, 17
               

               Conread position:
               166-367
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               50, 106
               

               Conread position:
               166-382
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               166-382
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               63, 37
               

               Conread position:
               168-319
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               168-382
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               152, 9
               

               Conread position:
               169-361
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               21, 60
               

               Conread position:
               169-390
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               16, 28
               

               Conread position:
               171-365
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               45, 54
               

               Conread position:
               172-378
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               193, 26
               

               Conread position:
               175-347
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               45, 15
               

               Conread position:
               178-347
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               52, 166
               

               Conread position:
               178-380
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               179-380
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               42, 11
               

               Conread position:
               184-319
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               185-355
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               185-379
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               50, 34
               

               Conread position:
               185-408
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               83, 33
               

               Conread position:
               186-419
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               189, 124
               

               Conread position:
               189-386
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               31, 170
               

               Conread position:
               192-370
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               28, 165
               

               Conread position:
               193-370
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               23, 51
               

               Conread position:
               206-374
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               215-379
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               219-370
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               219-397
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               219-420
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               221-361
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               99, 123
               

               Conread position:
               221-380
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-381
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               228-362
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               240-397
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               278-407
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               120, 80
               
Show alignments to all cow chromosomes.