Cow genome map

Conread name: Ss1.1-rplun0130_c23.5

Conread position: 122-346
Cow position:
Alignm length: 229
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 19

Conread position: 122-362
Cow position:
Alignm length: 243
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 93, 11

Conread position: 122-366
Cow position:
Alignm length: 251
Alignm identity: 175
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 102, 19

Conread position: 122-373
Cow position:
Alignm length: 256
Alignm identity: 184
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 49, 19

Conread position: 122-376
Cow position:
Alignm length: 257
Alignm identity: 169
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 92

Conread position: 122-408
Cow position:
Alignm length: 290
Alignm identity: 202
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 19, 65

Conread position: 123-362
Cow position:
Alignm length: 246
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 18

Conread position: 131-304
Cow position:
Alignm length: 179
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 96

Conread position: 132-364
Cow position:
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 130

Conread position: 132-372
Cow position:
Alignm length: 246
Alignm identity: 168
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 83, 31

Conread position: 132-374
Cow position:
Alignm length: 248
Alignm identity: 176
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 42, 0

Conread position: 132-374
Cow position:
Alignm length: 251
Alignm identity: 173
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 18, 27

Conread position: 132-375
Cow position:
Alignm length: 248
Alignm identity: 170
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 132-378
Cow position:
Alignm length: 248
Alignm identity: 166
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 84, 41

Conread position: 132-380
Cow position:
Alignm length: 249
Alignm identity: 170
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 74, 0

Conread position: 132-383
Cow position:
Alignm length: 256
Alignm identity: 181
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 102

Conread position: 133-358
Cow position:
Alignm length: 230
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 65

Conread position: 141-409
Cow position:
Alignm length: 274
Alignm identity: 179
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 43

Conread position: 143-378
Cow position:
Alignm length: 237
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 203, 49

Conread position: 144-380
Cow position:
Alignm length: 241
Alignm identity: 161
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 107

Conread position: 146-335
Cow position:
Alignm length: 192
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 67

Conread position: 146-347
Cow position:
Alignm length: 205
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 149

Conread position: 146-378
Cow position:
Alignm length: 236
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 17

Conread position: 146-382
Cow position:
Alignm length: 239
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 32

Conread position: 146-407
Cow position:
Alignm length: 263
Alignm identity: 185
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 71, 61

Conread position: 153-383
Cow position:
Alignm length: 233
Alignm identity: 176
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 65, 16

Conread position: 154-319
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 61, 15

Conread position: 154-353
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 49

Conread position: 154-370
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 64, 206

Conread position: 160-310
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 160-313
Cow position:
Alignm length: 154
Alignm identity: 119
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 160-318
Cow position:
Alignm length: 161
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 14

Conread position: 160-334
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 122, 13

Conread position: 160-347
Cow position:
Alignm length: 189
Alignm identity: 131
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 61, 9

Conread position: 160-357
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 55, 12

Conread position: 160-357
Cow position:
Alignm length: 199
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 9

Conread position: 160-364
Cow position:
Alignm length: 207
Alignm identity: 139
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 9

Conread position: 160-368
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 9

Conread position: 160-368
Cow position:
Alignm length: 210
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 43, 13

Conread position: 160-368
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 9

Conread position: 160-376
Cow position:
Alignm length: 218
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 9

Conread position: 160-380
Cow position:
Alignm length: 221
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 160-380
Cow position:
Alignm length: 230
Alignm identity: 158
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 59, 11

Conread position: 160-380
Cow position:
Alignm length: 222
Alignm identity: 166
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 52, 9

Conread position: 160-380
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 160-381
Cow position:
Alignm length: 225
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 13

Conread position: 160-382
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 8, 18

Conread position: 160-382
Cow position:
Alignm length: 223
Alignm identity: 164
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 8, 0

Conread position: 160-397
Cow position:
Alignm length: 242
Alignm identity: 175
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 106, 8

Conread position: 160-397
Cow position:
Alignm length: 239
Alignm identity: 165
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 208, 9

Conread position: 160-406
Cow position:
Alignm length: 250
Alignm identity: 164
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 9

Conread position: 160-407
Cow position:
Alignm length: 253
Alignm identity: 169
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 9

Conread position: 163-393
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 199, 18

Conread position: 164-286
Cow position:
Alignm length: 123
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 164-306
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 121

Conread position: 164-319
Cow position:
Alignm length: 157
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 101

Conread position: 164-354
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 49, 31

Conread position: 164-373
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 53, 192

Conread position: 164-378
Cow position:
Alignm length: 216
Alignm identity: 160
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 51, 81

Conread position: 164-382
Cow position:
Alignm length: 220
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 9

Conread position: 164-408
Cow position:
Alignm length: 248
Alignm identity: 175
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 200, 71

Conread position: 165-354
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 141

Conread position: 165-364
Cow position:
Alignm length: 203
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 165-367
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 131

Conread position: 165-368
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 165-370
Cow position:
Alignm length: 207
Alignm identity: 143
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 55, 126

Conread position: 165-373
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 56, 12

Conread position: 165-378
Cow position:
Alignm length: 215
Alignm identity: 154
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 45, 59

Conread position: 165-380
Cow position:
Alignm length: 217
Alignm identity: 162
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 47, 72

Conread position: 165-380
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 123, 128

Conread position: 165-381
Cow position:
Alignm length: 219
Alignm identity: 162
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 52, 129

Conread position: 165-394
Cow position:
Alignm length: 240
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 164

Conread position: 165-397
Cow position:
Alignm length: 234
Alignm identity: 163
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 60, 0

Conread position: 165-406
Cow position:
Alignm length: 243
Alignm identity: 165
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 70, 33

Conread position: 165-408
Cow position:
Alignm length: 244
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 166-366
Cow position:
Alignm length: 204
Alignm identity: 146
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 166-368
Cow position:
Alignm length: 204
Alignm identity: 153
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 57, 170

Conread position: 166-378
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 167-354
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 36

Conread position: 167-376
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 171-379
Cow position:
Alignm length: 209
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 171-399
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 174-370
Cow position:
Alignm length: 200
Alignm identity: 140
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 46, 133

Conread position: 178-362
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 179-388
Cow position:
Alignm length: 214
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 40

Conread position: 182-382
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 29, 55

Conread position: 183-380
Cow position:
Alignm length: 198
Alignm identity: 149
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 184-370
Cow position:
Alignm length: 190
Alignm identity: 147
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 25, 107

Conread position: 184-380
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 29, 0

Conread position: 184-380
Cow position:
Alignm length: 199
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 57

Conread position: 184-388
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 28, 140

Conread position: 184-408
Cow position:
Alignm length: 226
Alignm identity: 165
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 31, 55

Conread position: 184-408
Cow position:
Alignm length: 228
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 180, 39

Conread position: 185-362
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 111, 0

Conread position: 186-361
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 186-407
Cow position:
Alignm length: 223
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 38

Conread position: 188-368
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 160, 0

Conread position: 188-376
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 188-407
Cow position:
Alignm length: 220
Alignm identity: 154
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 190-370
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 173

Conread position: 191-345
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 197-376
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 23, 71

Conread position: 200-378
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 27, 159

Conread position: 211-408
Cow position:
Alignm length: 199
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 187, 11

Conread position: 212-378
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 57, 13

Conread position: 213-374
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 57, 151

Conread position: 215-347
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 218-376
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 224-361
Cow position:
Alignm length: 138
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 228-374
Cow position:
Alignm length: 147
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 240-398
Cow position:
Alignm length: 159
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 154, 0

Show alignments to all cow chromosomes.