Cow genome map


           Conread name:
           Ss1.1-rplun0130_c23.5
        

               Conread position:
               117-408
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               61, 245
               

               Conread position:
               122-358
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               89, 19
               

               Conread position:
               122-370
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               45, 29
               

               Conread position:
               132-408
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               88, 31
               

               Conread position:
               137-374
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               193, 23
               

               Conread position:
               142-362
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               16, 28
               

               Conread position:
               143-345
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               36, 129
               

               Conread position:
               143-397
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               23, 81
               

               Conread position:
               146-319
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               79, 35
               

               Conread position:
               146-382
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               70, 145
               

               Conread position:
               146-407
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               54, 23
               

               Conread position:
               147-378
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               72, 15
               

               Conread position:
               154-324
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 106
               

               Conread position:
               155-347
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               61, 16
               

               Conread position:
               157-382
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               160-315
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               53, 9
               

               Conread position:
               160-317
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               60, 9
               

               Conread position:
               160-319
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               160-334
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               160-334
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               32, 9
               

               Conread position:
               160-361
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               67, 9
               

               Conread position:
               160-367
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 8
               

               Conread position:
               160-370
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               60, 12
               

               Conread position:
               160-370
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               61, 9
               

               Conread position:
               160-376
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               197, 9
               

               Conread position:
               160-378
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               170, 9
               

               Conread position:
               160-380
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               96, 9
               

               Conread position:
               160-380
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               160-390
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               57, 9
               

               Conread position:
               160-395
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               54, 9
               

               Conread position:
               160-397
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               56, 9
               

               Conread position:
               160-398
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               25, 9
               

               Conread position:
               160-406
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               61, 9
               

               Conread position:
               162-372
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               164-316
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               47, 32
               

               Conread position:
               164-347
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               164-363
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               51, 164
               

               Conread position:
               164-367
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               164-398
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               44, 87
               

               Conread position:
               164-408
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               234, 48
               

               Conread position:
               164-419
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               56, 13
               

               Conread position:
               165-319
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               56, 29
               

               Conread position:
               165-341
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               17, 23
               

               Conread position:
               165-345
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               165-347
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               165-362
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               165, 43
               

               Conread position:
               165-376
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               190, 58
               

               Conread position:
               165-377
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               165-391
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               165-419
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               62, 13
               

               Conread position:
               166-369
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               46, 9
               

               Conread position:
               166-390
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               33, 18
               

               Conread position:
               173-358
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               173-364
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               173-390
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               41, 186
               

               Conread position:
               173-407
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               157, 153
               

               Conread position:
               174-397
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               43, 146
               

               Conread position:
               183-374
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               184-317
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               28, 15
               

               Conread position:
               184-368
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               184-370
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               90, 35
               

               Conread position:
               184-380
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               155
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               28, 133
               

               Conread position:
               184-403
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               42, 130
               

               Conread position:
               185-319
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               189-318
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               29, 42
               

               Conread position:
               190-370
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               23, 170
               

               Conread position:
               196-354
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               211-368
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               218-390
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               110, 102
               

               Conread position:
               219-382
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               226-379
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               228-362
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.