Cow genome map
| Conread name: | Ss1.1-rplun0130_c23.5 |
| Conread position: | 117-319 |
| Cow position: | chr4:51729818-51730013 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 119-387 |
| Cow position: | chr4:59377776-59378040 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 122-319 |
| Cow position: | chr4:66112208-66112008 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 122-328 |
| Cow position: | chr4:17112012-17111802 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 61, 18 |
| Conread position: | 122-361 |
| Cow position: | chr4:11194050-11194290 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 49, 8 |
| Conread position: | 122-378 |
| Cow position: | chr4:25537410-25537670 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 19, 210 |
| Conread position: | 122-408 |
| Cow position: | chr4:23600044-23600314 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 52, 17 |
| Conread position: | 132-356 |
| Cow position: | chr4:12049118-12049346 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 162 |
| Conread position: | 132-362 |
| Cow position: | chr4:34641854-34641620 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 21, 208 |
| Conread position: | 132-363 |
| Cow position: | chr4:34337394-34337165 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 86, 31 |
| Conread position: | 132-370 |
| Cow position: | chr4:1419095-1419338 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 42, 136 |
| Conread position: | 132-370 |
| Cow position: | chr4:31136624-31136866 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 42, 141 |
| Conread position: | 132-378 |
| Cow position: | chr4:3421500-3421746 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 88, 41 |
| Conread position: | 132-390 |
| Cow position: | chr4:3687796-3688061 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 18, 70 |
| Conread position: | 132-407 |
| Cow position: | chr4:59277603-59277330 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 132-408 |
| Cow position: | chr4:38935229-38935506 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 41, 206 |
| Conread position: | 132-408 |
| Cow position: | chr4:54479031-54478769 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 40, 89 |
| Conread position: | 134-357 |
| Cow position: | chr4:3283570-3283346 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 139-347 |
| Cow position: | chr4:54455460-54455252 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 25, 148 |
| Conread position: | 140-347 |
| Cow position: | chr4:51898891-51899097 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 32, 111 |
| Conread position: | 140-380 |
| Cow position: | chr4:19118890-19119141 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 143-416 |
| Cow position: | chr4:64040009-64040274 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 146-308 |
| Cow position: | chr4:20299160-20299326 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 28, 70 |
| Conread position: | 146-319 |
| Cow position: | chr4:21064923-21065099 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 26, 97 |
| Conread position: | 146-376 |
| Cow position: | chr4:19435146-19435373 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 77 |
| Conread position: | 146-378 |
| Cow position: | chr4:12901667-12901438 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 80 |
| Conread position: | 148-368 |
| Cow position: | chr4:33433372-33433148 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 207 |
| Conread position: | 154-378 |
| Cow position: | chr4:48173037-48173256 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 18, 45 |
| Conread position: | 155-370 |
| Cow position: | chr4:40414730-40414516 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 63, 202 |
| Conread position: | 157-319 |
| Cow position: | chr4:8947294-8947458 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 15, 31 |
| Conread position: | 159-347 |
| Cow position: | chr4:24002062-24001876 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 68, 10 |
| Conread position: | 160-294 |
| Cow position: | chr4:19463401-19463534 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-342 |
| Cow position: | chr4:16799282-16799100 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 58, 13 |
| Conread position: | 160-344 |
| Cow position: | chr4:20139611-20139429 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 58, 9 |
| Conread position: | 160-347 |
| Cow position: | chr4:34022681-34022494 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 56, 9 |
| Conread position: | 160-347 |
| Cow position: | chr4:34630799-34630989 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 68, 9 |
| Conread position: | 160-347 |
| Cow position: | chr4:38952458-38952644 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 160-350 |
| Cow position: | chr4:21232968-21232779 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 32, 9 |
| Conread position: | 160-354 |
| Cow position: | chr4:21391907-21391714 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 60, 13 |
| Conread position: | 160-354 |
| Cow position: | chr4:48409364-48409171 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 76, 9 |
| Conread position: | 160-354 |
| Cow position: | chr4:61897630-61897437 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 160-357 |
| Cow position: | chr4:44449598-44449408 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 58, 9 |
| Conread position: | 160-362 |
| Cow position: | chr4:23847142-23846946 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 51, 9 |
| Conread position: | 160-362 |
| Cow position: | chr4:38157185-38156982 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 61, 9 |
| Conread position: | 160-367 |
| Cow position: | chr4:13026208-13026412 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 62, 12 |
| Conread position: | 160-368 |
| Cow position: | chr4:34503198-34503406 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 111, 13 |
| Conread position: | 160-368 |
| Cow position: | chr4:45644402-45644209 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-368 |
| Cow position: | chr4:54190994-54191199 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 9 |
| Conread position: | 160-369 |
| Cow position: | chr4:5913442-5913235 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 62, 8 |
| Conread position: | 160-370 |
| Cow position: | chr4:36290534-36290736 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-370 |
| Cow position: | chr4:58881057-58880850 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 160-373 |
| Cow position: | chr4:27530023-27530233 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 52, 9 |
| Conread position: | 160-374 |
| Cow position: | chr4:20147091-20147303 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 205, 9 |
| Conread position: | 160-374 |
| Cow position: | chr4:51727982-51728196 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 111, 9 |
| Conread position: | 160-374 |
| Cow position: | chr4:68387697-68387910 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 24, 9 |
| Conread position: | 160-376 |
| Cow position: | chr4:4319241-4319033 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 184, 8 |
| Conread position: | 160-376 |
| Cow position: | chr4:37935378-37935166 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-376 |
| Cow position: | chr4:51851112-51851330 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 160-376 |
| Cow position: | chr4:63096168-63095956 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 9 |
| Conread position: | 160-378 |
| Cow position: | chr4:45775434-45775218 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 19, 9 |
| Conread position: | 160-380 |
| Cow position: | chr4:21874080-21874300 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 63, 8 |
| Conread position: | 160-380 |
| Cow position: | chr4:38944352-38944136 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 62, 9 |
| Conread position: | 160-382 |
| Cow position: | chr4:7808479-7808697 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 66, 99 |
| Conread position: | 160-392 |
| Cow position: | chr4:13222277-13222053 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-393 |
| Cow position: | chr4:36731099-36731327 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 34, 53 |
| Conread position: | 160-396 |
| Cow position: | chr4:10379014-10379251 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 66, 9 |
| Conread position: | 160-397 |
| Cow position: | chr4:19098370-19098611 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 54, 204 |
| Conread position: | 160-398 |
| Cow position: | chr4:19322176-19321936 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 30, 13 |
| Conread position: | 160-398 |
| Cow position: | chr4:65950561-65950796 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-406 |
| Cow position: | chr4:19501182-19500944 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 238, 11 |
| Conread position: | 160-407 |
| Cow position: | chr4:51769017-51769254 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 195, 9 |
| Conread position: | 160-408 |
| Cow position: | chr4:19700012-19700252 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 204, 9 |
| Conread position: | 160-418 |
| Cow position: | chr4:36577724-36577465 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 106, 9 |
| Conread position: | 162-361 |
| Cow position: | chr4:48961579-48961381 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 15 |
| Conread position: | 162-396 |
| Cow position: | chr4:48396886-48396654 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 103, 10 |
| Conread position: | 162-404 |
| Cow position: | chr4:10915936-10915690 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 55, 64 |
| Conread position: | 164-318 |
| Cow position: | chr4:47730764-47730920 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 164-333 |
| Cow position: | chr4:11332001-11332174 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 164-334 |
| Cow position: | chr4:13693765-13693594 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 164-357 |
| Cow position: | chr4:65919522-65919709 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 164-370 |
| Cow position: | chr4:17774443-17774238 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 33, 9 |
| Conread position: | 164-372 |
| Cow position: | chr4:17186442-17186235 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 51, 71 |
| Conread position: | 164-376 |
| Cow position: | chr4:28772159-28771947 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 51, 28 |
| Conread position: | 164-380 |
| Cow position: | chr4:19578306-19578509 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 141, 50 |
| Conread position: | 164-380 |
| Cow position: | chr4:42423896-42423683 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 63, 19 |
| Conread position: | 164-396 |
| Cow position: | chr4:9121-8894 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 199, 13 |
| Conread position: | 165-286 |
| Cow position: | chr4:24458195-24458073 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 165-346 |
| Cow position: | chr4:21257217-21257034 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 165-353 |
| Cow position: | chr4:29291429-29291611 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 165-357 |
| Cow position: | chr4:68889653-68889460 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 165-362 |
| Cow position: | chr4:20327801-20327603 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 54, 62 |
| Conread position: | 165-364 |
| Cow position: | chr4:33970994-33970791 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 55, 187 |
| Conread position: | 165-367 |
| Cow position: | chr4:19097197-19097397 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 165-368 |
| Cow position: | chr4:19102975-19102772 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 58, 85 |
| Conread position: | 165-368 |
| Cow position: | chr4:19408090-19407888 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 147 |
| Conread position: | 165-368 |
| Cow position: | chr4:56239945-56239749 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 165-369 |
| Cow position: | chr4:11969372-11969566 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 49 |
| Conread position: | 165-369 |
| Cow position: | chr4:52832108-52831904 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 51, 14 |
| Conread position: | 165-372 |
| Cow position: | chr4:12903728-12903934 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 63, 193 |
| Conread position: | 165-378 |
| Cow position: | chr4:53100708-53100926 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 165-380 |
| Cow position: | chr4:7571319-7571534 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 174 |
| Conread position: | 165-384 |
| Cow position: | chr4:42921941-42921732 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 165-396 |
| Cow position: | chr4:17084431-17084195 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 165-408 |
| Cow position: | chr4:44773136-44772894 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 35, 195 |
| Conread position: | 165-408 |
| Cow position: | chr4:48152461-48152226 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 233, 64 |
| Conread position: | 166-319 |
| Cow position: | chr4:24744498-24744343 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 168-367 |
| Cow position: | chr4:66136692-66136497 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 168-378 |
| Cow position: | chr4:13344449-13344658 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 49, 193 |
| Conread position: | 170-382 |
| Cow position: | chr4:61313294-61313089 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 150, 44 |
| Conread position: | 171-368 |
| Cow position: | chr4:61188954-61188760 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 36 |
| Conread position: | 172-368 |
| Cow position: | chr4:35981910-35982108 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 36, 154 |
| Conread position: | 173-362 |
| Cow position: | chr4:9815430-9815242 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 173-371 |
| Cow position: | chr4:49826171-49826365 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 47, 26 |
| Conread position: | 173-378 |
| Cow position: | chr4:37915420-37915216 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 46, 98 |
| Conread position: | 173-378 |
| Cow position: | chr4:54927524-54927320 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 47, 188 |
| Conread position: | 173-385 |
| Cow position: | chr4:20027188-20026976 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 35, 165 |
| Conread position: | 174-376 |
| Cow position: | chr4:46566555-46566348 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 52, 192 |
| Conread position: | 175-324 |
| Cow position: | chr4:19493472-19493623 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 177-409 |
| Cow position: | chr4:46435244-46435475 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 42, 182 |
| Conread position: | 178-333 |
| Cow position: | chr4:13991032-13990882 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 29, 48 |
| Conread position: | 178-374 |
| Cow position: | chr4:60719022-60719217 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 23, 172 |
| Conread position: | 178-380 |
| Cow position: | chr4:62472003-62472201 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 184-318 |
| Cow position: | chr4:46550307-46550442 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 184-319 |
| Cow position: | chr4:20505153-20505021 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 79, 33 |
| Conread position: | 184-333 |
| Cow position: | chr4:620205-620058 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 36, 23 |
| Conread position: | 184-347 |
| Cow position: | chr4:61478530-61478696 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 184-372 |
| Cow position: | chr4:19323901-19324090 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 184-372 |
| Cow position: | chr4:37991526-37991705 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 31, 65 |
| Conread position: | 184-386 |
| Cow position: | chr4:69290810-69290615 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 184-396 |
| Cow position: | chr4:65650200-65649992 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 184, 41 |
| Conread position: | 184-408 |
| Cow position: | chr4:8182711-8182489 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 87, 15 |
| Conread position: | 184-408 |
| Cow position: | chr4:45705974-45706191 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 179, 42 |
| Conread position: | 185-352 |
| Cow position: | chr4:48422805-48422973 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 185-362 |
| Cow position: | chr4:59002204-59002034 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 185-391 |
| Cow position: | chr4:48485922-48486129 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 162 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 185-408 |
| Cow position: | chr4:68456989-68456769 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 84, 33 |
| Conread position: | 186-373 |
| Cow position: | chr4:34509769-34509957 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 188-383 |
| Cow position: | chr4:54541708-54541514 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 31, 172 |
| Conread position: | 190-347 |
| Cow position: | chr4:17851318-17851162 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 190-362 |
| Cow position: | chr4:28701289-28701464 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 106 |
| Conread position: | 190-397 |
| Cow position: | chr4:10851515-10851312 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 196-384 |
| Cow position: | chr4:65131514-65131328 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 152 |
| Conread position: | 200-371 |
| Cow position: | chr4:12441840-12442009 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 200-371 |
| Cow position: | chr4:13241570-13241739 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 200-420 |
| Cow position: | chr4:41292007-41291796 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 203-380 |
| Cow position: | chr4:38210030-38209853 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 15, 157 |
| Conread position: | 205-363 |
| Cow position: | chr4:19431748-19431590 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 145 |
| Conread position: | 206-384 |
| Cow position: | chr4:51920494-51920674 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 210-380 |
| Cow position: | chr4:44903248-44903415 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 211-368 |
| Cow position: | chr4:68590733-68590881 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 211-387 |
| Cow position: | chr4:60443085-60442912 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 212-408 |
| Cow position: | chr4:18951928-18952123 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 10, 147 |
| Conread position: | 219-378 |
| Cow position: | chr4:36744543-36744698 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 53, 72 |
| Conread position: | 228-396 |
| Cow position: | chr4:58305933-58305767 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
Show alignments to all cow chromosomes.