Cow genome map
| Conread name: | Ss1.1-rplun0130_c23.5 |
| Conread position: | 121-352 |
| Cow position: | chr5:62172313-62172541 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 50, 20 |
| Conread position: | 122-368 |
| Cow position: | chr5:14314423-14314672 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 19, 240 |
| Conread position: | 122-378 |
| Cow position: | chr5:35684836-35685090 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 44, 19 |
| Conread position: | 122-396 |
| Cow position: | chr5:23168927-23168653 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 96, 19 |
| Conread position: | 122-420 |
| Cow position: | chr5:55966981-55966690 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 19, 93 |
| Conread position: | 123-372 |
| Cow position: | chr5:60016066-60016313 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 167 |
| Conread position: | 124-379 |
| Cow position: | chr5:68718774-68719024 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 232, 28 |
| Conread position: | 131-375 |
| Cow position: | chr5:22242869-22242615 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 168 |
| Conread position: | 131-390 |
| Cow position: | chr5:43457611-43457366 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 174, 40 |
| Conread position: | 132-291 |
| Cow position: | chr5:64823405-64823243 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 132-334 |
| Cow position: | chr5:49440966-49440760 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 132-347 |
| Cow position: | chr5:7044801-7044581 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 42, 198 |
| Conread position: | 132-347 |
| Cow position: | chr5:57935203-57934984 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 132-367 |
| Cow position: | chr5:20422278-20422049 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 132-370 |
| Cow position: | chr5:49474639-49474397 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 38 |
| Conread position: | 132-378 |
| Cow position: | chr5:32339058-32338813 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 51, 123 |
| Conread position: | 132-380 |
| Cow position: | chr5:50599962-50600203 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 42, 56 |
| Conread position: | 132-380 |
| Cow position: | chr5:56070762-56071015 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 232 |
| Conread position: | 132-383 |
| Cow position: | chr5:5111169-5110911 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 41, 233 |
| Conread position: | 134-319 |
| Cow position: | chr5:32696911-32696727 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 40, 7 |
| Conread position: | 134-354 |
| Cow position: | chr5:30302803-30303022 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 7, 104 |
| Conread position: | 134-393 |
| Cow position: | chr5:50533477-50533218 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 14, 149 |
| Conread position: | 146-362 |
| Cow position: | chr5:14629893-14629666 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 146-364 |
| Cow position: | chr5:36039084-36038860 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 28, 144 |
| Conread position: | 146-364 |
| Cow position: | chr5:42050471-42050692 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 46, 108 |
| Conread position: | 146-364 |
| Cow position: | chr5:56014654-56014872 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 70, 23 |
| Conread position: | 146-368 |
| Cow position: | chr5:50575705-50575928 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 83 |
| Conread position: | 146-376 |
| Cow position: | chr5:69461254-69461486 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 67, 176 |
| Conread position: | 146-396 |
| Cow position: | chr5:63987525-63987274 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 71, 150 |
| Conread position: | 146-408 |
| Cow position: | chr5:35969462-35969720 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 218, 14 |
| Conread position: | 154-380 |
| Cow position: | chr5:55955838-55956067 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 126 |
| Conread position: | 158-354 |
| Cow position: | chr5:63992236-63992041 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 159-398 |
| Cow position: | chr5:45420196-45419964 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 160-334 |
| Cow position: | chr5:31640359-31640536 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 9 |
| Conread position: | 160-347 |
| Cow position: | chr5:15598294-15598114 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 67, 9 |
| Conread position: | 160-352 |
| Cow position: | chr5:46509928-46509736 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 61, 9 |
| Conread position: | 160-354 |
| Cow position: | chr5:29903579-29903392 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 160-354 |
| Cow position: | chr5:50821721-50821914 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 58, 9 |
| Conread position: | 160-359 |
| Cow position: | chr5:26150482-26150286 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-362 |
| Cow position: | chr5:38833062-38833260 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 70, 9 |
| Conread position: | 160-366 |
| Cow position: | chr5:17087083-17086878 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 55, 9 |
| Conread position: | 160-368 |
| Cow position: | chr5:40109430-40109635 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 57, 9 |
| Conread position: | 160-368 |
| Cow position: | chr5:44446929-44446722 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 58, 13 |
| Conread position: | 160-369 |
| Cow position: | chr5:7697944-7698144 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 159, 9 |
| Conread position: | 160-376 |
| Cow position: | chr5:34561951-34562169 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 37, 9 |
| Conread position: | 160-376 |
| Cow position: | chr5:35826542-35826754 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 56, 9 |
| Conread position: | 160-376 |
| Cow position: | chr5:67212295-67212511 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 50, 9 |
| Conread position: | 160-378 |
| Cow position: | chr5:30276636-30276843 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-380 |
| Cow position: | chr5:29827988-29828203 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 104, 9 |
| Conread position: | 160-380 |
| Cow position: | chr5:45845753-45845533 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 57, 9 |
| Conread position: | 160-380 |
| Cow position: | chr5:47601758-47601967 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 160-380 |
| Cow position: | chr5:59627035-59626815 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 160-382 |
| Cow position: | chr5:6045230-6045453 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 55, 8 |
| Conread position: | 160-382 |
| Cow position: | chr5:21828805-21829024 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 58, 9 |
| Conread position: | 160-382 |
| Cow position: | chr5:57074394-57074173 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 160-387 |
| Cow position: | chr5:19523839-19524062 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 186, 8 |
| Conread position: | 160-387 |
| Cow position: | chr5:73418344-73418127 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 126, 9 |
| Conread position: | 160-406 |
| Cow position: | chr5:66551960-66551714 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 160-408 |
| Cow position: | chr5:25495412-25495170 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 12, 58 |
| Conread position: | 160-408 |
| Cow position: | chr5:44028366-44028125 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 57, 14 |
| Conread position: | 160-408 |
| Cow position: | chr5:46512824-46512586 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 216, 9 |
| Conread position: | 160-408 |
| Cow position: | chr5:65941311-65941071 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 59, 8 |
| Conread position: | 161-397 |
| Cow position: | chr5:40241981-40242216 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 60, 152 |
| Conread position: | 163-368 |
| Cow position: | chr5:69337766-69337963 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 164-347 |
| Cow position: | chr5:63150225-63150045 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 164-361 |
| Cow position: | chr5:54375565-54375364 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 52, 60 |
| Conread position: | 164-362 |
| Cow position: | chr5:41545952-41545754 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 54, 39 |
| Conread position: | 164-363 |
| Cow position: | chr5:8821075-8820874 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 15, 124 |
| Conread position: | 164-367 |
| Cow position: | chr5:29912357-29912563 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 13, 116 |
| Conread position: | 164-368 |
| Cow position: | chr5:11229727-11229530 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 159, 49 |
| Conread position: | 164-376 |
| Cow position: | chr5:62378733-62378931 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 164-378 |
| Cow position: | chr5:66257580-66257791 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 164-380 |
| Cow position: | chr5:45397514-45397724 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 164-382 |
| Cow position: | chr5:61725910-61726118 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 164-408 |
| Cow position: | chr5:30629216-30628973 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 142, 21 |
| Conread position: | 165-306 |
| Cow position: | chr5:34638827-34638967 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 165-319 |
| Cow position: | chr5:64321695-64321850 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 25, 60 |
| Conread position: | 165-334 |
| Cow position: | chr5:66366450-66366620 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 129 |
| Conread position: | 165-346 |
| Cow position: | chr5:45804002-45804182 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 72, 48 |
| Conread position: | 165-354 |
| Cow position: | chr5:72951784-72951975 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 165-367 |
| Cow position: | chr5:28035684-28035886 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 43, 131 |
| Conread position: | 165-368 |
| Cow position: | chr5:17555089-17554888 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 55, 25 |
| Conread position: | 165-369 |
| Cow position: | chr5:56524112-56524318 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 53, 164 |
| Conread position: | 165-371 |
| Cow position: | chr5:43402843-43403053 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 49, 182 |
| Conread position: | 165-374 |
| Cow position: | chr5:41165029-41165239 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 165-378 |
| Cow position: | chr5:65752800-65753014 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 56, 183 |
| Conread position: | 165-380 |
| Cow position: | chr5:21617400-21617612 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 64, 38 |
| Conread position: | 165-384 |
| Cow position: | chr5:24996280-24996062 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 55, 64 |
| Conread position: | 165-384 |
| Cow position: | chr5:30253684-30253900 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 165-396 |
| Cow position: | chr5:64592151-64591924 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 165-397 |
| Cow position: | chr5:4220927-4221153 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 203, 48 |
| Conread position: | 165-397 |
| Cow position: | chr5:43992265-43992498 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 41, 62 |
| Conread position: | 165-401 |
| Cow position: | chr5:26467566-26467806 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 166-265 |
| Cow position: | chr5:60126315-60126415 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 166-362 |
| Cow position: | chr5:30949972-30949777 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 19 |
| Conread position: | 166-362 |
| Cow position: | chr5:56339074-56338882 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 166-368 |
| Cow position: | chr5:60183745-60183949 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 47, 197 |
| Conread position: | 166-373 |
| Cow position: | chr5:74643727-74643528 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 167-372 |
| Cow position: | chr5:37646601-37646395 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 152 |
| Conread position: | 171-354 |
| Cow position: | chr5:53835662-53835847 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 64, 138 |
| Conread position: | 171-370 |
| Cow position: | chr5:56877434-56877627 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 126, 37 |
| Conread position: | 171-376 |
| Cow position: | chr5:12434482-12434694 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 69 |
| Conread position: | 171-379 |
| Cow position: | chr5:17768195-17767996 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 115, 52 |
| Conread position: | 171-403 |
| Cow position: | chr5:72895636-72895866 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 173-378 |
| Cow position: | chr5:67118369-67118577 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 158 |
| Conread position: | 175-370 |
| Cow position: | chr5:57101829-57101638 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 114 |
| Conread position: | 178-317 |
| Cow position: | chr5:63192786-63192647 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 112 |
| Conread position: | 178-362 |
| Cow position: | chr5:56517058-56517243 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 39, 112 |
| Conread position: | 178-370 |
| Cow position: | chr5:72006537-72006344 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 42, 182 |
| Conread position: | 179-380 |
| Cow position: | chr5:69099675-69099876 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 40, 180 |
| Conread position: | 180-325 |
| Cow position: | chr5:31052343-31052482 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 184-376 |
| Cow position: | chr5:66530879-66531072 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 31, 133 |
| Conread position: | 184-382 |
| Cow position: | chr5:17602239-17602048 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 38, 28 |
| Conread position: | 184-391 |
| Cow position: | chr5:27306265-27306474 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 184-396 |
| Cow position: | chr5:35982779-35982563 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 184-396 |
| Cow position: | chr5:61102676-61102887 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 184-398 |
| Cow position: | chr5:49342087-49341876 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 33, 10 |
| Conread position: | 184-408 |
| Cow position: | chr5:20288302-20288078 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 171, 213 |
| Conread position: | 185-377 |
| Cow position: | chr5:66466281-66466468 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 185-397 |
| Cow position: | chr5:4166607-4166812 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 185-399 |
| Cow position: | chr5:22667040-22667246 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 185-409 |
| Cow position: | chr5:14920969-14920745 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 35, 55 |
| Conread position: | 187-368 |
| Cow position: | chr5:57686776-57686594 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 27, 174 |
| Conread position: | 187-381 |
| Cow position: | chr5:9894161-9893968 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 22, 41 |
| Conread position: | 187-398 |
| Cow position: | chr5:22795178-22795387 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 31, 103 |
| Conread position: | 188-342 |
| Cow position: | chr5:20407714-20407559 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 188-374 |
| Cow position: | chr5:28302784-28302594 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 176 |
| Conread position: | 188-407 |
| Cow position: | chr5:49501859-49501639 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 25, 35 |
| Conread position: | 188-408 |
| Cow position: | chr5:30232871-30233090 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 32, 140 |
| Conread position: | 189-376 |
| Cow position: | chr5:26549175-26548986 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 191-378 |
| Cow position: | chr5:12322838-12322652 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 99 |
| Conread position: | 197-372 |
| Cow position: | chr5:60668674-60668855 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 35 |
| Conread position: | 200-354 |
| Cow position: | chr5:45187142-45186989 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 129 |
| Conread position: | 209-375 |
| Cow position: | chr5:17104839-17105000 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 211-405 |
| Cow position: | chr5:39035770-39035959 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 212-368 |
| Cow position: | chr5:34915064-34914910 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 213-381 |
| Cow position: | chr5:9234000-9233832 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 12, 147 |
| Conread position: | 215-397 |
| Cow position: | chr5:24069382-24069566 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 47 |
| Conread position: | 217-370 |
| Cow position: | chr5:50824586-50824740 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 218-374 |
| Cow position: | chr5:69636219-69636375 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 235-390 |
| Cow position: | chr5:46704287-46704133 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 126, 0 |
Show alignments to all cow chromosomes.